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Features and Secondary Structure
	1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330 . 340 . 350 . 360 . 370 . 380 . 390 . 400 . 410 . 420 . 430 . 440 . 450 . 460 . 470 . 480 . 490 . 500 . 510 . 520 . 530 . 540 . 550 . 560 . 570 . 580 . 590 . 600 . 610 . 620 . 630 . 640 . 650 . 660
	MSSKRTEGTAADEERRQTSAASSGSSSVSSTDSEEASSSVSDSSSSASGSSSGSESSDSERPLSPPQRQSAAATERATSTQQLQQQRHVQLNPELRFERPDKEYIPLPPLRDMQDMAKVLFLLSTDKKRYPDGRHRTLDYFRVAVEMFVTEVRQEYKRQYQQAQRSGRVMQRFTWKNSGELAICFACCCDNVKLLYDSLQPGPLKPLWDAFVGQLAPMLIVQSRVPETMLSSQTYHTKYMDWVKGGTRYGGEQSTANVRFPSVADRRVKVETYLRSGAGYKIEAVQVGSTSAAPATVPAAVAPRPSLAAAAAPMQALETRAPFAGRLPGTGSVKVPVAPGVGGPRPPVKVPMKHAGGGVAHGSVTAAAAPPLASTSVKQMPPEMKHLFWLSVLAHVKGGEASRAFPDDRLEALPGLLRLCEMTEHTEEMCILMDVLAASSSGVQTVFERLGGLLSFRRFASHFIQSEEAEPLMQLVEQLARWRVAAWGSTSQQAWQTDMNQRRRRDLMWLRTLPLIPEAKRAAWGAVLLVMEQRYIFKAPRPDDTTTADNPLKRRRPEVELGDLHAVLSDNVDMQRWVVPRVNVFSAVRLPVELRVPPLCTKLEEDTVRFLNSKREYAEKAQVTWRERLEKILSAQPRAPGAAVPVPLWYDPYALLSVASPQL
tmhmm (0)	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (17%)	-----------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------XXXXXX----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------XXXXXXXXXXXXXXXXXXXXX----------XXXXXXXXXXXXXX----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
coiled-coils (0%)	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (33%)	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXX-----------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXX------XXX-XX--XXXXXXXXXXXXXXX---------XXXXXXXXXXXX------------------XXXXXX--------------------------------------------------------------------------------XXXXXXXXXXXXX---------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------------------------------------------------------------------------XX
psipred	--------------------------------HHHHH-----------------------------------------------HHHHHH-----EE------------------HHHHEEHHH----------EEEHHHHHHHHHHHHHHHHHHHHHHHHHHH-------EEEE-----HHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHH---HHHH--EEHHHHHHHHH---EE-------HH----HHHHHHHHHHHHH-----EEEEEEEE---------------------------------------------------------------HHHH----------------HHHHHHHH---HHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHH----HHHHHHHHHHHHH--HHHHHHHH----EEEEHHHHHHHHHH----HHHHHHHHHHHHHHHHH----HHHHHHHHH-------HHHH-------HHHHHHHHHHHHHHHH-------HHHHHH-------------------------------------EEEEE------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------HHHHH-------

# SignalP-4.0 gram+ predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    37	    0.188
  max. Y    37	    0.213
  max. S    16	    0.433
  mean S     1-36   0.234
       D     1-36   0.221    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.221 D-cutoff=0.450 Networks=SignalP-TM

Domain Repeats Prediction
Boundary	STD (+/-)	Consensus
--	--	--

Ginzu Domain Prediction 1
Domain	Span	Source	Reference Parent	Parent Span	Confidence	Annotations
	1-65	alignment	4zrlB_101	1-64	0.123100	--
	66-110	alignment	1jjsA_301	1-42	0.229600	TRANSCRIPTION
	111-287	alignment	2xseA_101	1-160	0.702300	OXIDOREDUCTASE
	288-349	alignment	4v1nR_301	1-105	0.1503	--
	350-435	alignment	3slaA_301	1-166	0.209700	SIGNALING PROTEIN
	436-515	alignment	4g3aA_309	1-227	0.075300	--
	516-581	alignment	4btsA3_310	1-196	0.1893	--
	582-663	alignment	1x4tA_309	1-92	0.259800	RNA BINDING PROTEIN

Ginzu Domain Prediction 2
Domain	Span	Source	Reference Parent	Parent Span	Confidence	Annotations
	1-65	msa	4zrlB_101	1-64	0.123100	--
	66-110	msa	1jjsA_301	1-42	0.229600	--
	111-287	alignment	2xseA_101	1-160	0.702300	OXIDOREDUCTASE
	288-349	cutpref	--	--	0.000000	--
	350-435	msa	3slaA_301	1-166	0.209700	--
	436-515	msa	4g3aA_309	1-227	0.075300	--
	516-581	cutpref	--	--	0.000000	--
	582-663	alignment	1x4tA_309	1-92	0.259800	RNA BINDING PROTEIN

PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA
TaxID	Species	Alignments	PSI-Blast Data (alignment with lowest E value)
			E value	Query Span	Sbjct Span	Bit Score	Identity	HSP Length	Accession	Description
435258	Leishmania infantum JPCM5	1 (5.56%)	0.0	1-663	1-663	1018	100	663	ref|XP_001469567.1|	conserved hypothetical protein [Leishmania infantum JPCM5] e...
5661	Leishmania donovani	1 (5.56%)	0.0	1-663	1-663	1017	100	663	ref|XP_003865158.1|	hypothetical protein, conserved [Leishmania donovani] emb|CB...
347515	Leishmania major strain Friedlin	1 (5.56%)	0.0	1-662	1-662	927	96	662	ref|XP_001686609.1|	conserved hypothetical protein [Leishmania major strain Frie...
929439	Leishmania mexicana MHOM/GT/2001/U1103	1 (5.56%)	0.0	1-662	1-655	893	90	663	ref|XP_003874381.1|	conserved hypothetical protein [Leishmania mexicana MHOM/GT/...
420245	Leishmania braziliensis MHOM/BR/75/M2904	1 (5.56%)	0.0	1-662	1-672	876	85	673	ref|XP_001568673.1|	conserved hypothetical protein [Leishmania braziliensis MHOM...
134006	Phytomonas sp. isolate EM1	1 (5.56%)	0.0	59-658	57-673	809	47	626	emb|CCW59927.1|	unnamed protein product [Phytomonas sp. isolate EM1]
59799	Angomonas deanei	2 (11.11%)	5E-95	92-358	60-333	355	47	284	gb|EPY20098.1|	hypothetical protein AGDE_14860 [Angomonas deanei]
134013	Phytomonas sp. isolate Hart1	1 (5.56%)	0.0	16-658	15-656	789	45	662	emb|CCW67100.1|	unnamed protein product [Phytomonas sp. isolate Hart1]
5693	Trypanosoma cruzi	3 (16.67%)	0.0	54-660	54-623	829	39	608	ref|XP_805926.1|	hypothetical protein [Trypanosoma cruzi strain CL Brener] gb...
0	UNIDENTIFIED	1 (5.56%)	0.0	54-660	48-617	814	39	608	gb|ESS70088.1|	hypothetical protein TCDM_01206 [Trypanosoma cruzi Dm28c]
85056	Trypanosoma cruzi marinkellei	1 (5.56%)	1E-175	163-660	8-475	623	38	501	gb|EKF27784.1|	hypothetical protein MOQ_008484 [Trypanosoma cruzi marinkell...
1055687	Trypanosoma vivax Y486	1 (5.56%)	0.0	48-661	40-631	750	36	630	emb|CCC51434.1|	conserved hypothetical protein [Trypanosoma vivax Y486]
1068625	Trypanosoma congolense IL3000	1 (5.56%)	0.0	88-661	32-564	665	31	585	emb|CCC93636.1|	conserved hypothetical protein [Trypanosoma congolense IL300...
679716	Trypanosoma brucei gambiense DAL972	1 (5.56%)	0.0	37-659	92-665	685	30	623	emb|CBH15499.1|	hypothetical protein, conserved [Trypanosoma brucei gambiens...
999953	Trypanosoma brucei brucei strain 927/4 GUTat10.1	1 (5.56%)	0.0	37-659	60-633	673	30	623	ref|XP_822727.1|	hypothetical protein [Trypanosoma brucei brucei strain 927/4...