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Features and Secondary Structure
	1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330 . 340 . 350 . 360 . 370 . 380 . 390 . 400 . 410 . 420 . 430 . 440 . 450 . 460 . 470 . 480 . 490 . 500 . 510 . 520 . 530 . 540 . 550 . 560 . 570 . 580 . 590 . 600 . 610 . 620 . 630 . 640 . 650 . 660
	MSSKQTEGTTADEERQRTSVSSSDSSSVSTTDSDEVSSGASDSSSSGSGSTSASESSDRERPSSLSQRQNTATRERPTSTQQLQQQRHVQLNPELRFERPDKEYIPLPPLRDMQDMSKVLFLLSTDKKRYPDGRHRTLDYFRASVEMFVTEVRQEYKRQYQQAQRGGRAMQRFTWKNSGELAICFACCCDNVKLLYDSLQPGPLKPLWDAFVSQLAPMLIIQSRVPEMMLSSQTYHTKYMDWVKGGTRYGGEQSTANVRFPSVADRRVKVETYLRSGAGYKIEAVQVGLTAAVPAAAPVAAGSHRSSTAASAPVQATETRAPFAGRLPGTGFAKVPVSPGIGGPRPPLKVPMKHAGGGAAQGSVTGAAAPPLASTCVKQMPPEMKHLFWLSVLAHVKGGDASRAFPDDRLEVLPGLLRLCEMTEHTEEMCILMDVLAASSSGVQTVFERLGGLLSFRRFASHFIQREEAEPLMQIIEQLARWRVVAWGSTSQQAWQTDMNQRRTRDLMWLRTLPLIPEEKRAAWGALLLVMEQRYIFKAPRPDDTTTMDNPLKRRRPEIELGDLHAVLSDNVDMQKWVVPRVNVFSAVRLPVELRVPPLCTKSEEDTVRFLNSKREYAEKAQVAWRERLEKILCSQPHALDSLEPVPLWYDPYALLSLASSQT
tmhmm (0)	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (11%)	-----------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------XXXXXX-----------------------------------------------------------------------XXXXXXXXXXXXXXX----------------------------------------------------------------------------------------------------------------------XXXXXXXXXXX--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
coiled-coils (0%)	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (35%)	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXX-------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-X---X---XXXXX---------XXXXXXXXXXXXXXX------XXXXXXXX--------------------XXX------------------------------------------------------------------------------------XXXXXXXXXXXX--------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------------------------------------------------XXXX
psipred	--------------HHH---------------HHHH----------------------------------------------HHHHHHHH-----EE------------------HHHHEEEHH----------EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH------EEEE-----EEEEHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHH----------EEEEHHHHHHH-------------------HHHHHHHHHHHHH-----EEEEEE----------------------------------------------------------------HHHH----------------HHHHHHHHH--HHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHH----HHHHHHHHHHHHH--HHHHHHHH----EEEEHHHHHHHHHH----HHHHHHHHHHHHHHHH-----HHHHHHHHH-------HHHH-------HHHHHHHHHHHHHHHHHH--------HHHHH-------------------------------EEEEEE----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------HHHHH-------
sam	-----EEEE--------EEEE------------------E--------------------------------------------HHHEHE------E---------------HHHHHHHHHHHHH---------EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH---EEEEEEEE--HHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHH---HHHH-----EEEEEE------EEEEE----------HHHHHHHHHHHHE----EEEEEEEE-------------------------------------------------------------------------------------HHHHHHH-HHHHHHHHHHHHHHHHH----HH--HHHHHHH-HHHHHHH-----HHHHHHHHHHHHH----HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHH--------HHHHHHHH----HHHHHHHHHHHHHHHHHHE----HHHHHHHHH---H------------EEE----------------HHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------EEEEE--HHHHH-------
jufo	-----------------------------------------------------------------------------------HHHHHHH--------------------------HHHEEEEEE------------HHHHHHHHHHHHHHHHHHHHHHHHHHHH------EEEE------EEEHHHHHHHHHHHHHH----------HHHHHHHHHHEEE----HHH----------EEE------------------------HHEEEEEEE-------EEEEE---------------------------------------------------------------EE------------------------------HHHHHHHHHHHHHEEE------------HHHHHHHHHHHH-----HHHHHHHHHHH-----HHHHHH----EEEEEHHHH----------HHHHHHHHHHHHHHH-----HHHHHHHH-------HHHHHH--------HHHHHHHHHHHHHHEEE--------------------------------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------HHHH-------

# SignalP-4.0 gram+ predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    54	    0.211
  max. Y    41	    0.163
  max. S    33	    0.286
  mean S     1-40   0.185
       D     1-40   0.172    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.172 D-cutoff=0.450 Networks=SignalP-TM

Domain Repeats Prediction
Boundary	STD (+/-)	Consensus
--	--	--

Ginzu Domain Prediction 1
Domain	Span	Source	Reference Parent	Parent Span	Confidence	Annotations
	1-47	alignment	2pyqA_101	1-114	0.094900	UNKNOWN FUNCTION
	48-114	alignment	3mcbA_306	1-54	0.256700	CHAPERONE
	115-303	alignment	2xseA_301	1-160	0.697100	OXIDOREDUCTASE
	304-359	alignment	2kccA_301	1-84	0.3011	LIGASE
	360-538	alignment	3slaA_301	1-166	0.205400	SIGNALING PROTEIN
	539-590	alignment	3n41A_201	1-55	0.1135	VIRAL PROTEIN
	591-663	alignment	1x4tA_302	1-92	0.141600	RNA BINDING PROTEIN

Ginzu Domain Prediction 2
Domain	Span	Source	Reference Parent	Parent Span	Confidence	Annotations
	1-47	msa	2pyqA_101	1-114	0.094900	--
	48-114	alignment	3mcbA_306	1-54	0.256700	CHAPERONE
	115-303	alignment	2xseA_301	1-160	0.697100	OXIDOREDUCTASE
	304-359	alignment	2kccA_301	1-84	0.3011	LIGASE
	360-538	msa	3slaA_301	1-166	0.205400	--
	539-590	cutpref	--	--	0.000000	--
	591-663	msa	1x4tA_302	1-92	0.141600	--

PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA
TaxID	Species	Alignments	PSI-Blast Data (alignment with lowest E value)
			E value	Query Span	Sbjct Span	Bit Score	Identity	HSP Length	Accession	Description
435258	Leishmania infantum JPCM5	2 (5.0%)	0.0	1-662	1-662	914	88	662	ref|XP_001469567.1|	conserved hypothetical protein [Leishmania infantum JPCM5] e...
5661	Leishmania donovani	2 (5.0%)	0.0	1-662	1-662	913	88	662	ref|XP_003865158.1|	hypothetical protein, conserved [Leishmania donovani] emb|CB...
347515	Leishmania major strain Friedlin	2 (5.0%)	0.0	1-662	1-662	907	88	662	ref|XP_001686609.1|	conserved hypothetical protein [Leishmania major strain Frie...
929439	Leishmania mexicana MHOM/GT/2001/U1103	2 (5.0%)	0.0	1-662	1-655	881	84	663	ref|XP_003874381.1|	conserved hypothetical protein [Leishmania mexicana MHOM/GT/...
420245	Leishmania braziliensis MHOM/BR/75/M2904	2 (5.0%)	0.0	1-662	1-672	857	81	673	ref|XP_001568673.1|	conserved hypothetical protein [Leishmania braziliensis MHOM...
59799	Angomonas deanei	3 (7.5%)	1E-98	92-360	60-333	367	48	275	gb|EPY20098.1|	hypothetical protein AGDE_14860 [Angomonas deanei]
134006	Phytomonas sp. isolate EM1	2 (5.0%)	0.0	4-658	8-673	814	45	683	emb|CCW59927.1|	unnamed protein product [Phytomonas sp. isolate EM1]
134013	Phytomonas sp. isolate Hart1	2 (5.0%)	0.0	4-658	8-656	798	44	675	emb|CCW67100.1|	unnamed protein product [Phytomonas sp. isolate Hart1]
5693	Trypanosoma cruzi	6 (15.0%)	0.0	51-660	54-623	759	39	610	ref|XP_805926.1|	hypothetical protein [Trypanosoma cruzi strain CL Brener] gb...
0	UNIDENTIFIED	3 (7.5%)	0.0	51-660	48-617	742	39	610	gb|ESS70088.1|	hypothetical protein TCDM_01206 [Trypanosoma cruzi Dm28c]
85056	Trypanosoma cruzi marinkellei	2 (5.0%)	1E-161	174-660	17-475	574	38	491	gb|EKF27784.1|	hypothetical protein MOQ_008484 [Trypanosoma cruzi marinkell...
1055687	Trypanosoma vivax Y486	2 (5.0%)	0.0	63-661	42-631	727	36	618	emb|CCC51434.1|	conserved hypothetical protein [Trypanosoma vivax Y486]
1068625	Trypanosoma congolense IL3000	2 (5.0%)	0.0	88-661	32-564	668	31	576	emb|CCC93636.1|	conserved hypothetical protein [Trypanosoma congolense IL300...
679716	Trypanosoma brucei gambiense DAL972	2 (5.0%)	0.0	15-656	67-662	723	29	645	emb|CBH15499.1|	hypothetical protein, conserved [Trypanosoma brucei gambiens...
999953	Trypanosoma brucei brucei strain 927/4 GUTat10.1	2 (5.0%)	0.0	15-656	35-630	708	29	645	ref|XP_822727.1|	hypothetical protein [Trypanosoma brucei brucei strain 927/4...
28005	Strigomonas culicis	2 (5.0%)	8E-25	141-319	427-622	122	18	202	gb|EPY28078.1|	DNA J-binding protein [Strigomonas culicis]
5689	Leishmania tarentolae	1 (2.5%)	1E-21	106-335	382-635	112	17	261	sp|Q9U6M1.1|JBP1_LEITA	RecName: Full=Thymine dioxygenase JBP1; AltName: Full=J-bind...
5656	Crithidia fasciculata	1 (2.5%)	2E-23	148-377	430-663	117	16	253	sp|Q9U6M2.1|JBP1_CRIFA	RecName: Full=Thymine dioxygenase JBP1; AltName: Full=J-bind...