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Features and Secondary Structure
	1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330 . 340 . 350 . 360 . 370 . 380 . 390 . 400 . 410 . 420 . 430 . 440 . 450 . 460 . 470 . 480 . 490 . 500 . 510 . 520 . 530 . 540 . 550 . 560 . 570 . 580 . 590 . 600 . 610 . 620 . 630 . 640 . 650
	MSSKRTEAMTADEEPRRTSAVSNGSSSVSSTNSDEASSSVSDSSSSSGSGSSSGSESSDSERHSFPPQRQNSATTERTTSTQQPQQQRHVQLNPELRFERPDKEYIPLPPLRDMQDMAKVLFLLSTDKKRYPDGRHRTLDYFRVAVEMFVTEVRQEYQRQYQQAQRSGRAMQRFTWKNSGELAICFACCCDNVKLLYDSLQPGPLKPLWDAFVGQLAPMLIVQSRVPETMLSFQTYHTKYMDWVKGGTRYGGEQSTANVRFPSVADRRVKVETYLQSGAGYKIEAVQVGSTSAAAPRPSSAAAAAPVQALETRAPFAGRLPGTGSVKVPVAPGAGGPRPPVKVPMKHVGGGAAHGSVTAAAAPPLASTSVKQMPPEMKHLFWLSVLAHVKGGDASQAFPDDRLEALPGLLRLCEMTEHTEEMCILMDVLAASSSGVQTVFERLGGLLSFRRFASHFIQSEEAEPLMQLVEQLARWRVAAWGNTSQQAWQTDMKQRRTRDLMWLRTLSLIPEGKRAAWGALLLVMEQRYIFKAPRPDDTTTTDNPLKRRRPEVELGDLHAVLSDNVDMQRWVVPRVNVFSAVRLPVELRVPPLCTKLEEDTVRFLNSKREYAEKAQVTWRERLEKILSAQPRVPGAAVAVPLWYDPYALLSVASPQP
tmhmm (0)	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (21%)	-----------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------XXXXXXXXXXXXXX------------------------------------------------------------------XXXXXXXXXXXXX-----------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXX-------------------XXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXX---------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXX------------------------------------------------------------------------------------------------------------------
coiled-coils (0%)	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (37%)	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXX-----------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------XXXXXXXXXXXX------------------XXXXXX-------------------------------------------------------------------------------XXXXXXXXXXXXXX--------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------------------------------------------------XXX
psipred	----HHHH--------------------------HHH-----------------------------------------------------------EE------EE----------HHHHEEEHH----------EEEHHHHHHHHHHHHHHHHHHHHHHHHHHH-------EEEE-----HHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHH---HHHH--EEEHHHHHHHH---EE-------HH----HHHHHHHHHHHHH-----EEEEEEEEE---------------------------------------------------HHHHHH-----------HH----HHHHHHHHH--HHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHH----HHHHHHHHHHHHH--HHHHHHHH----EEEEHHHHHHHHHH----HHHHHHHHHHHHHHHHH----HHHHHHHHH-------HHHH-----------HHHHHHHHHHHH-------HHHHHHH---------------------------------EEEEEEEE-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------EEEE--HHHH--------

# SignalP-4.0 gram+ predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    37	    0.189
  max. Y    37	    0.253
  max. S    33	    0.570
  mean S     1-36   0.315
       D     1-36   0.277    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.277 D-cutoff=0.450 Networks=SignalP-TM

Domain Repeats Prediction
Boundary	STD (+/-)	Consensus
--	--	--

Ginzu Domain Prediction 1
Domain	Span	Source	Reference Parent	Parent Span	Confidence	Annotations
	1-66	alignment	2krgA_201	1-216	0.092300	SIGNALING PROTEIN
	67-114	alignment	3mcbA_303	1-54	0.240000	CHAPERONE
	115-289	alignment	2xseA_301	1-160	0.697100	OXIDOREDUCTASE
	290-363	alignment	2irfG_205	1-109	0.1303	GENE REGULATION/DNA
	364-569	alignment	5cm9A_201	1-405	0.056900	--
	570-656	alignment	1x4tA_309	1-92	0.285500	RNA BINDING PROTEIN

Ginzu Domain Prediction 2
Domain	Span	Source	Reference Parent	Parent Span	Confidence	Annotations
	1-66	msa	2krgA_201	1-216	0.092300	--
	67-114	msa	3mcbA_303	1-54	0.240000	--
	115-289	alignment	2xseA_301	1-160	0.697100	OXIDOREDUCTASE
	290-363	cutpref	--	--	0.000000	--
	364-569	msa	5cm9A_201	1-405	0.056900	--
	570-656	alignment	1x4tA_309	1-92	0.285500	RNA BINDING PROTEIN

PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA
TaxID	Species	Alignments	PSI-Blast Data (alignment with lowest E value)
			E value	Query Span	Sbjct Span	Bit Score	Identity	HSP Length	Accession	Description
929439	Leishmania mexicana MHOM/GT/2001/U1103	1 (5.56%)	0.0	1-656	1-656	1015	100	656	ref|XP_003874381.1|	conserved hypothetical protein [Leishmania mexicana MHOM/GT/...
347515	Leishmania major strain Friedlin	1 (5.56%)	0.0	1-656	1-663	924	91	664	ref|XP_001686609.1|	conserved hypothetical protein [Leishmania major strain Frie...
435258	Leishmania infantum JPCM5	1 (5.56%)	0.0	1-655	1-662	927	90	663	ref|XP_001469567.1|	conserved hypothetical protein [Leishmania infantum JPCM5] e...
5661	Leishmania donovani	1 (5.56%)	0.0	1-655	1-662	925	90	663	ref|XP_003865158.1|	hypothetical protein, conserved [Leishmania donovani] emb|CB...
420245	Leishmania braziliensis MHOM/BR/75/M2904	1 (5.56%)	0.0	1-656	1-673	856	82	674	ref|XP_001568673.1|	conserved hypothetical protein [Leishmania braziliensis MHOM...
59799	Angomonas deanei	2 (11.11%)	1E-102	93-370	60-328	377	49	278	gb|EPY20098.1|	hypothetical protein AGDE_14860 [Angomonas deanei]
134006	Phytomonas sp. isolate EM1	1 (5.56%)	0.0	56-651	59-673	814	47	618	emb|CCW59927.1|	unnamed protein product [Phytomonas sp. isolate EM1]
134013	Phytomonas sp. isolate Hart1	1 (5.56%)	0.0	72-651	74-656	802	47	592	emb|CCW67100.1|	unnamed protein product [Phytomonas sp. isolate Hart1]
5693	Trypanosoma cruzi	3 (16.67%)	0.0	57-656	55-625	821	41	602	ref|XP_805926.1|	hypothetical protein [Trypanosoma cruzi strain CL Brener] gb...
0	UNIDENTIFIED	1 (5.56%)	0.0	57-656	49-619	804	41	602	gb|ESS70088.1|	hypothetical protein TCDM_01206 [Trypanosoma cruzi Dm28c]
85056	Trypanosoma cruzi marinkellei	1 (5.56%)	1E-174	175-656	17-477	619	39	487	gb|EKF27784.1|	hypothetical protein MOQ_008484 [Trypanosoma cruzi marinkell...
1055687	Trypanosoma vivax Y486	1 (5.56%)	0.0	49-654	40-631	736	37	630	emb|CCC51434.1|	conserved hypothetical protein [Trypanosoma vivax Y486]
1068625	Trypanosoma congolense IL3000	1 (5.56%)	0.0	89-654	32-564	686	31	568	emb|CCC93636.1|	conserved hypothetical protein [Trypanosoma congolense IL300...
679716	Trypanosoma brucei gambiense DAL972	1 (5.56%)	0.0	38-652	92-665	684	31	615	emb|CBH15499.1|	hypothetical protein, conserved [Trypanosoma brucei gambiens...
999953	Trypanosoma brucei brucei strain 927/4 GUTat10.1	1 (5.56%)	0.0	38-652	60-633	673	31	615	ref|XP_822727.1|	hypothetical protein [Trypanosoma brucei brucei strain 927/4...