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Job 79398 [SSGCID - LeinA.19526.a] [2017-11-20] [D-172-16-30-137.dhcp4.x.x] [Structure] [Complete] WDR82 homologue (glucosyl transferase interacting protein 1) (GTIP1) - BATCH:79386

Features and Secondary Structure  
 
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MSSSAAPSPPFTSSGVAAGSAAVDGVPIEVASMFYTGINEPRPTAMNFSFDGLHFVSAHTDDAVRLIDVGNMTNTDVIICDAFGVHNVRYTHSSSVVCVAPRFHLDGHLHLLNTETSQFFGEMAYINDAESEMLPVANTPVYSTLAQCPATDVLGAVVVAKGRLALFHPLISGCIAATPERSIVGSRACLQFSQDGHRIAIGDDHRIVLFDRRSLFRAPLAVLENKHVFTTSTSLTRCKGLEFSADASRLLLTSSSGEVVVYDWLRGEAVANYFHGDARRHFVGSADAIGAQHAFPYQAASPILQLTSSMTGGRHLLVYAGCPSNSAASTRQGRLLYELQSKDSDVPVAIAVNPRLQLAATAARSITWWAFHSSVVEAYATLTEAGTTAAD
tmhmm (0)
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (6%)
-XXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
coiled-coils (0%)
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (3%)
X--------------------------------XX-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXX
psipred
-EEEE-------EEEE-----EE-------EEEE--------EEEEEE-----EEEEE----EEEEEE-----EEEEE------EEEEEEE-----EEEEE--------EEEE-----EEEEEEEE------EEEEEE-----EEEEE----EEEEEE-----EEE--------EEE---------EEEEEE-----EEEEE----EEEEEE-------EEEE-----EE-------EEEEEE-----EEEEEE---EEEEEE-----EEEEEE-----EEEEE-------EEEEE-------EEEEEEE----EEEEEE----EEEEE-----EEEEE-------EEEEEE-----EEEEE---EEEEE----EEEEE------------

# SignalP-4.0 gram- predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    18	    0.133
  max. Y     6	    0.261
  max. S     1	    0.638
  mean S     1-5    0.583
       D     1-5    0.413    0.570  NO
Name=tmp_signalp_seq	SP='NO' D=0.413 D-cutoff=0.570 Networks=SignalP-noTM


Domain Repeats Prediction     Top
  Boundary     STD (+/-)     Consensus  
------


Ginzu Domain Prediction 1     Top
Domain Span Source Reference Parent   Parent Span     Confidence     Annotations  
  1-391     alignment     5i2tA_306     1-606   0.166900   --

Ginzu Domain Prediction 2       Top
Domain Span Source Reference Parent   Parent Span     Confidence     Annotations  
  1-217     alignment     4j73A_309     1-295   0.5967   PROTEIN TRANSPORT
  218-391     alignment     5h3tD_301     1-657   0.3892   --


PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA       Top
TaxID Species Alignments PSI-Blast Data (alignment with lowest E value)
E value Query Span Sbjct Span Bit Score Identity HSP Length Accession Description
5661Leishmania donovani1 (0.05%)2E-8033-3911-359306100359ref|XP_001468069.1|conserved hypothetical protein [Leishmania infantum JPCM5] r...
929439Leishmania mexicana MHOM/GT/2001/U11031 (0.05%)3E-8133-3911-35930896359ref|XP_003878228.1|conserved hypothetical protein [Leishmania mexicana MHOM/GT/...
347515Leishmania major strain Friedlin5 (0.24%)9E-8033-3911-35930396359ref|XP_001685708.1|conserved hypothetical protein [Leishmania major strain Frie...
420245Leishmania braziliensis MHOM/BR/75/M29042 (0.09%)9E-8133-3911-35930790359ref|XP_001567754.1|conserved hypothetical protein [Leishmania braziliensis MHOM...
502779Paracoccidioides sp. 'lutzii' Pb011 (0.05%)5E-7811-37222-35429822377ref|XP_002795795.1|WD repeat-containing protein [Paracoccidioides sp. 'lutzii' ...
502780Paracoccidioides brasiliensis Pb181 (0.05%)8E-7517-37219-34528722370gb|EEH49567.1|WD repeat-containing protein [Paracoccidioides brasiliensis ...
339724Ajellomyces capsulatus NAm12 (0.09%)2E-7711-37222-35429521376ref|XP_001542413.1|WD repeat protein [Ajellomyces capsulatus NAm1] gb|EDN05981....
246410Coccidioides immitis RS23 (1.09%)5E-7711-37424-35729521378ref|XP_003067267.1|WD domain, G-beta repeat containing protein [Coccidioides po...
336963Uncinocarpus reesii 17041 (0.05%)2E-7627-37427-35829221364ref|XP_002584280.1|hypothetical protein UREG_04969 [Uncinocarpus reesii 1704] g...
544711Ajellomyces capsulatus H881 (0.05%)4E-7611-37222-35429221377gb|EER38865.1|WD40 domain-containing protein [Ajellomyces capsulatus H143]...
559297Ajellomyces dermatitidis ER-31 (0.05%)1E-7611-37223-34929320376gb|EEQ90030.1|WD repeat protein [Ajellomyces dermatitidis ER-3]
559298Ajellomyces dermatitidis SLH140811 (0.05%)1E-7611-37223-34929320376ref|XP_002621190.1|WD repeat protein [Ajellomyces dermatitidis SLH14081] gb|EEQ...
344612Aspergillus clavatus NRRL 18 (0.38%)7E-7531-37536-36628720361ref|XP_001274527.1|WD repeat protein [Aspergillus clavatus NRRL 1] gb|EAW13101....
29760Vitis vinifera6 (0.28%)8E-6340-38130-32624719342emb|CAN80813.1|hypothetical protein VITISV_020464 [Vitis vinifera]
367110Neurospora crassa OR74A33 (1.56%)6E-6235-37153-37324519349ref|XP_962818.1|hypothetical protein NCU07885 [Neurospora crassa OR74A] gb|E...
240176Coprinopsis cinerea okayama7#1307 (0.33%)1E-1132-389972-136041418414ref|XP_001839683.1|HNWD3 [Coprinopsis cinerea okayama7#130] gb|EAU82131.1| HNWD...
1219028Rhodococcus wratislaviensis NBRC 1006051 (0.05%)3E-872-390363-79432918448dbj|GAF48126.1|hypothetical protein RW1_049_00350 [Rhodococcus wratislavien...
10228Trichoplax adhaerens3 (0.14%)1E-6827-37513-31626718350ref|XP_002108174.1|hypothetical protein TRIADDRAFT_49741 [Trichoplax adhaerens]...
422288Beggiatoa sp. SS1 (0.05%)1E-4818-26138-25320018245gb|EDN71836.1|WD-40 repeat protein [Beggiatoa sp. SS]
4092Nicotiana plumbaginifolia1 (0.05%)2E-396-26273-32316918270emb|CAA96528.1|G protein beta-subunit-like protein [Nicotiana plumbaginifol...






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