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Job 79408 [SSGCID - TrbrA.19526.a] [2017-11-20] [D-172-16-30-137.dhcp4.x.x] [Structure] [Complete] WDR82 homologue (glucosyl transferase interacting protein 1) (GTIP1) - BATCH:79386

Features and Secondary Structure  
 
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MKNYTPVEIAASFFSAYGDPRSTSIDFSLDGKYFLSTHTDDAMRLVDVTEIKHKETIALNTVGLWRARFTQSSGVVCLASHRPCDGHLYLLNLNTAQLFASMSFVSDTVPVVPAIPNRPAYTAIAQSPCNDTIAAVFSAQGRLLLFHPLISGAVAASAENTFIGGGGAISFSPEGTQLLVSDDSCVRVYDYRKLFSGPLLTLQHNKMLPHCDSCGERRCIGMDIGSGGEELLLTYECGGVLLYDLRQNAVRGANFGIKGTIDGINSSCSVGARYVHPYLGHSPVVQLDSTSGKDTRLLVYHGSRAKSRWGSLRYEILCVADGDPIAMSVNPQYSMVATAAGGVTWWSFPPR
tmhmm (0)
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low complexity (0%)
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coiled-coils (0%)
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disordered (1%)
XX------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------X
psipred
------------EE-------EEEEEE-----EEEEE----EEEEEE-----EEEEE------EEEEEEE----EEEEEE------EEEEEE----EEEEEE------EEEEEE------EEEEEE------EEEEEE--EEEEEEE------EEEE---------EEEEE-----EEEEE-----EEEEE-------EEEE-----EEEE-------EEEEEE-----EEEEEE----EEEEE-----EEEEE--------EEE--------EEEEEEEE-----EEEEE----EEEEEE----------EEEEEE------EEEEEE-----EEEEE---EEEE-----

# SignalP-4.0 gram- predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    19	    0.153
  max. Y     2	    0.157
  max. S     1	    0.255
  mean S     1-1    0.255
       D     1-1    0.203    0.570  NO
Name=tmp_signalp_seq	SP='NO' D=0.203 D-cutoff=0.570 Networks=SignalP-noTM


Domain Repeats Prediction     Top
  Boundary     STD (+/-)     Consensus  
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Ginzu Domain Prediction 1     Top
Domain Span Source Reference Parent   Parent Span     Confidence     Annotations  
  1-351     alignment     5mzhB_302     1-415   0.103800   --

Ginzu Domain Prediction 2       Top
Domain Span Source Reference Parent   Parent Span     Confidence     Annotations  
  1-202     alignment     4j87A_305     1-316   0.5029   PROTEIN TRANSPORT
  203-351     alignment     5h3sA_307     1-655   0.3736   --


PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA       Top
TaxID Species Alignments PSI-Blast Data (alignment with lowest E value)
E value Query Span Sbjct Span Bit Score Identity HSP Length Accession Description
679716Trypanosoma brucei gambiense DAL9723 (0.13%)9E-721-3511-35127799351emb|CBH18720.1|hypothetical protein, conserved [Trypanosoma brucei gambiens...
5661Leishmania donovani2 (0.08%)6E-6012-3481-33923837341ref|XP_001468069.1|conserved hypothetical protein [Leishmania infantum JPCM5] r...
420245Leishmania braziliensis MHOM/BR/75/M29043 (0.13%)1E-5912-3481-33923637341ref|XP_001567754.1|conserved hypothetical protein [Leishmania braziliensis MHOM...
347515Leishmania major strain Friedlin5 (0.21%)1E-5912-3481-33923637341ref|XP_001685708.1|conserved hypothetical protein [Leishmania major strain Frie...
246410Coccidioides immitis RS20 (0.85%)8E-871-34621-35232722354ref|XP_003067267.1|WD domain, G-beta repeat containing protein [Coccidioides po...
502779Paracoccidioides sp. 'lutzii' Pb011 (0.04%)5E-841-34619-35131722355ref|XP_002795795.1|WD repeat-containing protein [Paracoccidioides sp. 'lutzii' ...
339724Ajellomyces capsulatus NAm12 (0.08%)3E-811-34619-35130822355ref|XP_001542413.1|WD repeat protein [Ajellomyces capsulatus NAm1] gb|EDN05981....
544711Ajellomyces capsulatus H881 (0.04%)1E-801-34619-35130622355gb|EER38865.1|WD40 domain-containing protein [Ajellomyces capsulatus H143]...
502780Paracoccidioides brasiliensis Pb181 (0.04%)2E-7912-34622-34230222343gb|EEH49567.1|WD repeat-containing protein [Paracoccidioides brasiliensis ...
336963Uncinocarpus reesii 17041 (0.04%)6E-861-34622-35332421354ref|XP_002584280.1|hypothetical protein UREG_04969 [Uncinocarpus reesii 1704] g...
447095Ajellomyces dermatitidis ATCC 261991 (0.04%)2E-831-34620-35231521355gb|EQL37693.1|hypothetical protein BDFG_00749 [Ajellomyces dermatitidis AT...
858893Exophiala dermatitidis NIH/UT86561 (0.04%)3E-751-34613-34328821356gb|EHY52662.1|hypothetical protein HMPREF1120_00871 [Exophiala dermatitidi...
482561Paracoccidioides brasiliensis Pb031 (0.04%)1E-651-34619-32625621355gb|EEH22773.1|WD repeat-containing protein [Paracoccidioides brasiliensis ...
436907Vanderwaltozyma polyspora DSM 702941 (0.04%)1E-638-35014-32625021347ref|XP_001643677.1|hypothetical protein Kpol_1057p7 [Vanderwaltozyma polyspora ...
451804Aspergillus fumigatus A11633 (0.13%)1E-841-34627-35731920354gb|EDP51974.1|WD repeat protein [Aspergillus fumigatus A1163]
5061Aspergillus niger8 (0.34%)1E-831-34628-35931620355ref|XP_001401308.1|WD repeat protein [Aspergillus niger CBS 513.88] emb|CAK4667...
344612Aspergillus clavatus NRRL 19 (0.38%)1E-831-34630-36031620354ref|XP_001274527.1|WD repeat protein [Aspergillus clavatus NRRL 1] gb|EAW13101....
1033177Aspergillus kawachii IFO 43081 (0.04%)2E-831-34628-35931620355gb|EHA28051.1|WD-40 repeat protein [Aspergillus niger ATCC 1015] dbj|GAA91...
1160506Aspergillus oryzae 3.0422 (0.08%)2E-811-34635-36530920355ref|XP_001824076.1|WD repeat protein [Aspergillus oryzae RIB40] ref|XP_00238115...
559298Ajellomyces dermatitidis SLH140811 (0.04%)6E-811-34620-34630720355ref|XP_002621190.1|WD repeat protein [Ajellomyces dermatitidis SLH14081] gb|EEQ...






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