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Features and Secondary Structure
	1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330 . 340 . 350 . 360 . 370 . 380 . 390 . 400 . 410 . 420 . 430 . 440 . 450 . 460 . 470 . 480 . 490 . 500 . 510 . 520 . 530 . 540 . 550 . 560 . 570 . 580 . 590 . 600 . 610 . 620 . 630 . 640 . 650 . 660 . 670 . 680 . 690 . 700 . 710 . 720 . 730 . 740 . 750 . 760 . 770 . 780 . 790 . 800 . 810
	MEPDPKKIKLDIFNFPTARETRTPEEVAESYAEAVKSHPFYDNVHSVIDFYDSGTIKDGRGQIIGVVLREALPKYAVSMASELLASAAVRTSLRSMMFGGESPLSGIAGYFDYRGSPVELKSRKTSFTYEHEAAWPAVFPVVDYVSELYRHVAPERWKAQNDAIPDVVRIHGTPFSTLTINSRFRTASHTDVGDFDGGYSCIACLDGHFKGLALAFDDFGINVLMQPRDVMIFDSHHFHSNTEVELSFSGEDWKRLTCVFYYRAALGEPASYAEYQRRLEKSKQDNSFTPVVSNVRVKENGTNLNRPSPVYPICPSPFWVPMVAHCLQHCASEAQCVHDAMTADGSRLAEVMFGEPLSTSDGIPLRGEDKKLKANSDSASRPLSRLGGFSETNLMVSTAVEKKKYLNSEFLSHFISAQLLDMWKQARGKWLELVGREWTHMLALNPERKDFLWKNQSEMNSAFFDLCEVGKQVMLGLLGKEVALPKEEQAFWTMYAVHLNAACAEELHMPHVAMSLRKLNVKLKDFNFGGTRYFKDMPPEEQKRRMERKQRIEEARRHGMSSGAHEKRANWLTNDSFDYQTEDCVVDYAQHKWPPPALHAKEITKNVRTGELPTREGVVRVLVVLPDPQSKLECVDCKLEVPETVRCSCEWERLMSSLAVRRVLAAAQRNLQLPGSVTHGNIEIRFAFHSRLPTDMCDFVVLQHVLSCIPDDVLASAYIRRAAALCTGCVYVVETDVQCRQYYTLKCAARCDYDAVASLFFQQLHRVSYGTKAARVRTKGELESLIPTVCCARYKLQGSPLNTTVHVVSPAPSR
tmhmm (0)	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (4%)	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXX-------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXX---------------------------------------------------------------------------------------------------------------------------------------------
coiled-coils (0%)	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (12%)	XXXXXX-XXX---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXX----------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXX
psipred	---------EEEE----------HHHHHHHHHHHHHH--------EEEEE----EEE----EEEEEEE-----HHHHHHHHHHHHHHHHHHHHHHHH----------EEE----------EE------HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH---EEEE-----EEEEEE-----------------EEEEEEE-------EEEEHH---EEE-----EEEEE--------EEEEE-----EEEEEEEEEEHHH------HHHHHHHHHHHHH------HHH-EEE-------------------HHHHHHHHHHHHHHHHH----HHHHH----HHHHHH----------------HHH--------------------HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHH-EEEEE-----EEE-----HHHHHHHHHHHHHHHHHHH---------------------------EEEHHH-----HHHHHHHH---------------EEEEEE-----------------------HHHHHHHH--HHHHHHHHH---------------EEEEEEE-----------HHHHHHHH---HHHHHHHHHHHHHHHH---EEEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHH----HHHHHHHHHHHHHHH--------EEEEEE------
sam	-----HHHHHHE-----------HHHHHHHHHHHHH--------HHHHHH-HHHEE-----EEEEEEE-----HHHHHHHHHHHHHHHHHHHHHHHH---------EEEEE--------------HHHHH-HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH-----E------EEEEEE-----------------EEEEEEEEEE---HHHHHHHH-EEEE----EEEEEE--------EEEE-------EEEEEEEEE--HHHHHH-HHHHHHHHHHHHHH---------EEEE------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHH--------------------EEE------------------HHHHHHHHHHHHHHHHH-H-H---HHHHHHHHHHHHHHHH-----HHHEEE------EEEE-----HHHHHHH------EEEEEE--------HHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHH-----------EEEE----HHHHHHHHHHHHHHHHHHHH-------------------------EEEEE---------H--------HHH--------EEEEEEEE----------------------HHHHHHHHH-HHHHHHHHHH----------E---EEEEEEE-------EEEEEEE----HHHHHHHHHHHHHHHHHHH---EEEEEEE-------EEEEE---HHHHHHHHHHHHHHHHHH----EEEEE--HHHHHHH---EE---EE----HHHEEEEE------
jufo	-------EEEE-------------HHHHHHHHHHHH---------EEEEE-----------EEEEEEEE---HHHHHHHHHHHHHHHHHHHHHHH-----------------------EE---------HHHHH----HHHHHHHHHHHHHHHHHHHHHHHH----EEEEE-----EEEEEEE---------------EEEEEEEE-----EEEEHHHH-EEEE----EEEEEE--------------------EEEEEEEEHH-------HHHHHHHHHHHHH---------EEEEE-------------------HHHHHHHHHHHHHHHHHHHHHHHHHH----EEHHH--------------------------------------HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------EEE-------HHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHH------HHHHHHHHHHH------------------HHHHHHHHHHHHHHHH---------HH--------------EEEEHHH---------HHHH---------------EEEEEEEE------------------------HHHHHHHHHHHHHHHHHHHH------------EEEEEEE----------EEEHHH-------HHHHHHHHHHHHHHH-EEEEEEEE---HHEEEEEEHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHH-------EEE-------EEEEEE-----

# SignalP-4.0 euk predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    61	    0.111
  max. Y     5	    0.111
  max. S     1	    0.119
  mean S     1-4    0.110
       D     1-4    0.111    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.111 D-cutoff=0.450 Networks=SignalP-noTM

Domain Repeats Prediction
Boundary	STD (+/-)	Consensus
--	--	--

Ginzu Domain Prediction 1
Domain	Span	Source	Reference Parent	Parent Span	Confidence	Annotations
	1-306	alignment	4ie6A_306	1-447	0.604200	OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
	307-381	alignment	4v4nBG_201	1-125	0.081500	--
	382-567	alignment	2xseA_201	1-160	0.846800	OXIDOREDUCTASE
	568-646	alignment	2o4eA_201	1-165	0.147100	PROTEIN BINDING
	647-814	alignment	3hnrA_302	1-193	0.476000	TRANSFERASE

Ginzu Domain Prediction 2
Domain	Span	Source	Reference Parent	Parent Span	Confidence	Annotations
	1-306	alignment	4ie6A_306	1-447	0.604200	OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
	307-381	msa	4v4nBG_201	1-125	0.081500	--
	382-567	alignment	2xseA_201	1-160	0.846800	OXIDOREDUCTASE
	568-646	msa	2o4eA_201	1-165	0.147100	--
	647-814	alignment	3hnrA_302	1-193	0.476000	TRANSFERASE

PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA
TaxID	Species	Alignments	PSI-Blast Data (alignment with lowest E value)
			E value	Query Span	Sbjct Span	Bit Score	Identity	HSP Length	Accession	Description
347515	Leishmania major strain Friedlin	3 (1.7%)	0.0	1-814	1-814	1308	100	814	ref|XP_001681321.1|	putative DNA J-binding protein [Leishmania major strain Frie...
5661	Leishmania donovani	3 (1.7%)	0.0	1-814	1-814	1312	96	814	ref|XP_003858833.1|	DNA J-binding protein, putative [Leishmania donovani] emb|CB...
435258	Leishmania infantum JPCM5	3 (1.7%)	0.0	1-814	1-814	1308	96	814	ref|XP_001463611.1|	putative DNA J-binding protein [Leishmania infantum JPCM5] s...
929439	Leishmania mexicana MHOM/GT/2001/U1103	3 (1.7%)	0.0	1-813	1-813	1296	92	813	ref|XP_003872831.1|	putative DNA J-binding protein [Leishmania mexicana MHOM/GT/...
5689	Leishmania tarentolae	2 (1.14%)	0.0	1-813	1-813	1287	90	813	sp|Q9U6M1.1|JBP1_LEITA	RecName: Full=Thymine dioxygenase JBP1; AltName: Full=J-bind...
420245	Leishmania braziliensis MHOM/BR/75/M2904	3 (1.7%)	0.0	1-813	1-812	1236	84	813	ref|XP_001562766.1|	putative DNA J-binding protein [Leishmania braziliensis MHOM...
5656	Crithidia fasciculata	1 (0.57%)	0.0	1-809	1-809	1150	64	810	sp|Q9U6M2.1|JBP1_CRIFA	RecName: Full=Thymine dioxygenase JBP1; AltName: Full=J-bind...
59799	Angomonas deanei	3 (1.7%)	0.0	1-658	1-664	854	52	670	gb|EPY31569.1|	DNA J-binding protein [Angomonas deanei]
28005	Strigomonas culicis	6 (3.41%)	0.0	1-809	1-808	1080	49	817	gb|EPY25659.1|	DNA J-binding protein [Strigomonas culicis] gb|EPY28890.1| D...
134006	Phytomonas sp. isolate EM1	3 (1.7%)	0.0	1-808	1-802	1109	48	811	emb|CCW64618.1|	unnamed protein product [Phytomonas sp. isolate EM1]
134013	Phytomonas sp. isolate Hart1	3 (1.7%)	0.0	1-808	1-802	1107	48	813	emb|CCW66736.1|	unnamed protein product [Phytomonas sp. isolate Hart1]
5693	Trypanosoma cruzi	9 (5.11%)	0.0	5-808	22-826	1097	48	812	ref|XP_811851.1|	DnaJ chaperone protein [Trypanosoma cruzi strain CL Brener] ...
0	UNIDENTIFIED	15 (8.52%)	0.0	5-808	22-826	1081	48	812	gb|ESS65746.1|	DnaJ chaperone protein [Trypanosoma cruzi Dm28c]
85056	Trypanosoma cruzi marinkellei	3 (1.7%)	0.0	6-808	23-824	1097	46	809	gb|EKF30620.1|	DnaJ chaperone protein, putative [Trypanosoma cruzi marinkel...
1055687	Trypanosoma vivax Y486	3 (1.7%)	0.0	3-809	19-827	1061	45	818	emb|CCC53964.1|	putative DNA J-binding protein [Trypanosoma vivax Y486]
999953	Trypanosoma brucei brucei strain 927/4 GUTat10.1	3 (1.7%)	0.0	16-809	40-835	1042	43	806	ref|XP_829420.1|	chaperone protein DnaJ [Trypanosoma brucei brucei strain 927...
679716	Trypanosoma brucei gambiense DAL972	3 (1.7%)	0.0	16-809	40-835	1041	43	806	sp|P86937.1|JBP1_TRYBB	RecName: Full=Thymine dioxygenase JBP1; AltName: Full=J-bind...
1068625	Trypanosoma congolense IL3000	2 (1.14%)	0.0	225-812	1-592	695	34	604	emb|CCC95890.1|	unnamed protein product [Trypanosoma congolense IL3000]
1287681	Eutypa lata UCREL1	5 (2.84%)	1E-7	143-240	399-502	66	29	105	gb|EMR64486.1|	hypothetical protein UCREL1_8553 [Eutypa lata UCREL1]
1168479	Persicivirga phage P12024L	1 (0.57%)	6E-64	45-287	27-283	252	27	264	ref|YP_006560425.1|	hypothetical protein P12024L_26 [Persicivirga phage P12024L]...