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Job 79412 [SSGCID - LeinA.19527.a] [2017-11-20] [D-172-16-30-137.dhcp4.x.x] [Structure] [Complete] Glucosyl transferase (HmdUGT) - BATCH:79386

Features and Secondary Structure  
  
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mfslniktaaspssaAPAPAPEVNAGEAPWAIIDVDEADSFESTPSTNSSGGQGGRHRYQHAAQPSHSPQSPETPIKFDHGAYPHCPIFIPSKGRSDLDRSTMAVLVRDLVPFVLVVEREEADAYRAMLDRLVGQYFGFAGMTFAANVDDGIEGATKTGAEVVVSSSTTPADLWAFPCACCCGSTDVAGSPSSPTTPGLSEDALRALALRLSAAFHHGYVFEPSASAAAGDHHGAVESNVSPPVSISPTAPSAASGSARRPSAAFVLRNVDEVRALFVIEVLPETNRGVSYVRNYILQVLVPRLMVACGVDRSGNVEELRLCGTGEHNTLTSAALRMAALEPDVYSALEWKSETESYLDARRASTTTNVVTTSTGSAAGTRDGVVSASVGALSAPTGQILAPAFSSSSAPRSSKPSSAAAATRGTPRLLHGLFGFYWVLDDDIYGFYQSHGSSTKNERISTRAMMREVDMRLRQLRHNADVASPPPPSVPPSCFQTPPTHSSGSAAASPYVLSHPQQQQNFVFTCKEDALQNNFISGGKGRLPTLQNYNLYYTTACFSLEYNRFALDTAPDTLSVNSYNNIACLFNYALLHNPPQMRYFPPGVPHVRRAEDALVGYLDHSMLWYRFAVREDYDFTLQLIARGLHTLRFRSIAFDVPQMMKVRGGMTDYYRNCHEEIRQQNDRFVLQWPAVAQHWVKGKEGNRRDDIRVRWDLLSPARAKHPGAFLYLSTPLPQLQPQRLSDDSTGGNGGVVSSSDSAATATAVEGAETETRKRLRPPSPTAPTAESSLAPAGRRPCVQAAATSAPAMSSTAARDWKGGYVVERWRDISREEARQHAGLVALSNDDIHIGRTVAVIPPFFDQKPSVVRATVIERAVEPTDSHSSSGRSGNASAAEAGDAQQSLTPRVIWTAVAQDVRGMPFLHVDTCFEVPAEGIEKAAASIDQFFAKMEGEPGP
tmhmm (0) 
               ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (20%) 
               -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXX---------------------------------------------------------------------------------------------------XXXXXXXXXXX--------------------------XXXXXXXXXXXXXXXXXXXXX-------------------------------------------------------------XXXXXXXXXXXXXXXX-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXX-------XXXXXXXXXXXXXX-------------------------------------------------------------------XXXXXXXXXXXXXXXXX----------------------------------------------------------
coiled-coils (0%) 
               ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (34%) 
               XXXXX-XX---------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------------------------------------------------XX-------------------------------XXXXXXXXXXXXXXXX-----------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------------------------------------------------------------------------------------------XXXXXXXXXXX------------------XXXXXXXXXXXXXXXXXXXXXXXXX----------------------XXXXXXXXXXXXXX-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------------------------------XXXXXX
psipred 
               --------------EEEEE-----------------------------------------EE----------EEE-----------HHHHHHH----EEEEE-HHHHHHHHHHHHHHHHHHH------------------------EEE------HHHHH--HHHH-------------------HHHHHHHHHHHHHHH---EE--------------------------------------------HHHH-HHHHHHEEEEEE-------HHHHHHHHHHHHHHHHHHHH--------EEEEEE---------HHHHHHHH--HHHHHHHHH----HHHHHHHHH------EE-------------EEEEE---------EE-HHH-------------HHHH-----HHHHHH-EEEEEE---HHHHHHH-------HHHHHHHHHHHHHHHHHHHHH---------------------------------EE--HHH---EEEEE-HHHHHH-----------------EEEEEEEEEE----EE-------EEE----HHHHHHHHHHH------------------HHHHH--------HHEEEEE-----HHHHHHHHHHHHHHHHH------HHHHH----HHHHHHHHHHHHHHHHHHHH--HHHHHHHH----------EEEEE-------------EEEE----------------------EEE-------EEEEEEEEHHHH--------------------------HH---------HHHHHHH----HHHHHHHHHHHHHHH----EE----------EEEE----------EEEEEEEHHHH---HHHHH----------------------EEEEEE--------EEEEEEE----HHHHHHHHHHHHHHHHHH------

# SignalP-4.0 gram+ predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    26	    0.289
  max. Y    16	    0.431
  max. S     3	    0.846
  mean S     1-15   0.700
       D     1-15   0.536    0.450  YES
Name=tmp_signalp_seq	SP='YES' Cleavage site between pos. 15 and 16: SSA-AP D=0.536 D-cutoff=0.450 Networks=SignalP-TM


Domain Repeats Prediction     Top
  Boundary     STD (+/-)     Consensus  
------

Ginzu Domain Prediction 1     Top
Domain Span Source Reference Parent   Parent Span     Confidence     Annotations  
  1-65     alignment     2lxrA_101     1-76   0.157700   OXIDOREDUCTASE
  66-135     alignment     5cypA_306     1-248   0.327400   --
  136-234     alignment     5wtqA_301     1-114   0.1650   --
  235-400     alignment     4txpC_201     1-147   0.088200   --
  401-481     alignment     3s4xA_105     1-367   0.2548   hydrolase
  482-723     alignment     2z86A_201     1-575   0.026000   TRANSFERASE
  724-888     alignment     5ec5B_201     1-284   0.0646   --
  889-939     alignment     5dduC_101     1-511   0.605000   --

Ginzu Domain Prediction 2     Top
Domain Span Source Reference Parent   Parent Span     Confidence     Annotations  
  1-65     msa     2lxrA_101     1-76   0.157700   --
  66-135     alignment     5cypA_306     1-248   0.327400   --
  136-234     cutpref     --     --   0.000000   --
  235-400     msa     4txpC_201     1-147   0.088200   --
  401-481     alignment     3s4xA_105     1-367   0.2548   hydrolase
  482-723     msa     2z86A_201     1-575   0.026000   --
  724-888     cutpref     --     --   0.000000   --
  889-939     alignment     5dduC_101     1-511   0.605000   --


PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA       Top
TaxID Species Alignments PSI-Blast Data (alignment with lowest E value)
E value Query Span Sbjct Span Bit Score Identity HSP Length Accession Description
5661Leishmania donovani1 (6.25%)0.01-93916-9541529100939ref|XP_003865365.1|hypothetical protein, conserved [Leishmania donovani] emb|CB...
435258Leishmania infantum JPCM51 (6.25%)0.01-93916-9541529100939ref|XP_001469830.1|conserved hypothetical protein [Leishmania infantum JPCM5] e...
347515Leishmania major strain Friedlin1 (6.25%)0.01-93816-953147694939ref|XP_001686814.1|conserved hypothetical protein [Leishmania major strain Frie...
929439Leishmania mexicana MHOM/GT/2001/U11031 (6.25%)0.01-93916-956146290941ref|XP_003874588.1|conserved hypothetical protein [Leishmania mexicana MHOM/GT/...
420245Leishmania braziliensis MHOM/BR/75/M29041 (6.25%)0.012-93827-949133581929ref|XP_001568879.1|conserved hypothetical protein [Leishmania braziliensis MHOM...
28005Strigomonas culicis1 (6.25%)0.061-78543-69273941748gb|EPY20102.1|hypothetical protein STCU_09155 [Strigomonas culicis]
85056Trypanosoma cruzi marinkellei1 (6.25%)1E-143538-930257-62251737406gb|EKF29630.1|hypothetical protein MOQ_006574 [Trypanosoma cruzi marinkell...
134006Phytomonas sp. isolate EM11 (6.25%)0.025-93931-1030903341073emb|CCW60100.1|unnamed protein product [Phytomonas sp. isolate EM1]
59799Angomonas deanei1 (6.25%)0.0127-8491-66770834767gb|EPY20287.1|hypothetical protein AGDE_14753 [Angomonas deanei]
5693Trypanosoma cruzi3 (18.75%)1E-147476-930191-62252934475ref|XP_804782.1|hypothetical protein [Trypanosoma cruzi strain CL Brener] gb...
0UNIDENTIFIED1 (6.25%)1E-140476-930191-62250734475gb|ESS63812.1|hypothetical protein TCDM_08296 [Trypanosoma cruzi Dm28c]
679716Trypanosoma brucei gambiense DAL9721 (6.25%)1E-125460-932201-64945532487emb|CBH15753.1|T. brucei spp.-specific protein [Trypanosoma brucei gambiens...
999953Trypanosoma brucei brucei strain 927/4 GUTat10.11 (6.25%)1E-124460-932201-64945332487emb|CAJ16957.1|hypothetical protein Tb10.v4.0246 [Trypanosoma brucei brucei...
134013Phytomonas sp. isolate Hart11 (6.25%)3E-8360-60020-46631728562emb|CCW66932.1|unnamed protein product [Phytomonas sp. isolate Hart1]



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