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Features and Secondary Structure
	1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330 . 340 . 350 . 360 . 370 . 380 . 390 . 400 . 410 . 420 . 430 . 440 . 450 . 460 . 470 . 480 . 490 . 500 . 510 . 520 . 530 . 540 . 550 . 560 . 570 . 580 . 590 . 600 . 610 . 620 . 630 . 640 . 650 . 660 . 670 . 680 . 690 . 700 . 710 . 720 . 730 . 740 . 750 . 760 . 770 . 780 . 790 . 800 . 810 . 820 . 830
	MKQKRGKQDVKMLESAPPQLLPKKGRLEISELAPQQRTIRTAEEIETAYNEAVRKHPFYDNADHTIDFHDATVFRDARGVVGGVFLPGALPAFAATMAADVLRPAAVRTSLRSNMFGGFAPLSGIAGYFDYRGSPVELKCRKTSFTYENVHSWPNVFPMIDYVSAIYKAVFPEQWAAQDAAVPDIVRIHGSPFSTLTVNQQFRTASHTDAGDFDMGYGLLAVLEGKFEGLSLALDDFGVCFRMQPRDILIFNTHFFHSNTEPELNHPRDDWSRLTCVCYYRAALGEPACVAEYERRLARAKEIGASPPPAVDAILQKDNGNNFNKPAPTFPYLLTPFGGAASVCSLHCCTAKLLRLHELLLENPTLEVILFGESLRTDDGLPRREKEQLISVHLPVVVKMSPSGGFSELGGALKAAEEKQYFFEEKYLADELGPDLMSMWTQSRAHWLRLVKEDWERLCRRDPERTKFTWNNSSAMNAAFFDLCEVAKQMMIGLLNKETPSSAENHSFWILFAAHLNYACTTENGMPRDAVGMHKLNVKLKDFHFGGTRYLKDMPPEEQERRLERKKRIEEARRRGSSAHETHTDNWLLNDTFDYQQEDRKVEFEENGWMTPEAYVKHLGLKPCGDVTAAASPTEPIHVLVVLPRPAAAATAKDAKRDVPLATSEESIRLLMNPAAQRVLRGKARNVALPSPLSFGGVKITVLFDGDDIDCIHPDFVILQHLLATIEEDEAAKARVKYWARVARYCVFVVETDVRDRRHFLLREEVRVAYEDVAEDCFRSLHAAAYSTKYNRLRTTPSLIALCNRKNIGLRFKFRGSPLNTIALVVVGERLD
tmhmm (1)	-------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXX-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (7%)	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXX---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXX---------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXX-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
coiled-coils (0%)	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (13%)	XXXXXXXXXXXXXXXXXXXX-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXX-XXXXX--------------------------------------------------------XXXXXXXXXXXXXXXXXXXX-X----------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------X
psipred	---------HHHH----HHH--HHHHHHHHH----------HHHHHHHHHHHHHH---------EEEE---EEEE-----EEEEEE-----HHHHHHHHHHHHHHHHHHHHHHH-----------HHHHH------HHHH-----HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH---EEEE-----EEEEEE------------------EEEEEEE------EEEEHH--EEEE-----EEEEE-HHH------EEE-----EEEEEEEEEEHHH----HHHHHHHHHHHHHH-------HHHHHHEE--------------------HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHH---------------HHH--------------------HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHH-EEEEE-----EEE-----HHHHHHHHHHHHHHHHHHHH------------HH-----------EEEHHH-----HHHHHHHH-----------------EEEEEEE--------------------HHHHHHHHH-HHHHHHHHH---------------EEEEEEE------------HHHHHHHH----HHHHHHHHHHHHHHH---EEEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHH----HHHHHH-------EEEEE------EEEEEEEE----

# SignalP-4.0 gram+ predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    43	    0.164
  max. Y     2	    0.185
  max. S     2	    0.362
  mean S     1-1    0.342
       D     1-1    0.246    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.246 D-cutoff=0.450 Networks=SignalP-TM

Domain Repeats Prediction
Boundary	STD (+/-)	Consensus
--	--	--

Ginzu Domain Prediction 1
Domain	Span	Source	Reference Parent	Parent Span	Confidence	Annotations
	1-307	alignment	4nm6A_304	1-407	0.465600	--
	308-405	alignment	4kqaA_305	1-418	0.098000	--
	406-593	alignment	2xseA_201	1-160	0.831600	OXIDOREDUCTASE
	594-832	alignment	3hnrA_302	1-193	0.387600	TRANSFERASE

Ginzu Domain Prediction 2
Domain	Span	Source	Reference Parent	Parent Span	Confidence	Annotations
	1-307	alignment	4nm6A_304	1-407	0.465600	--
	308-405	msa	4kqaA_305	1-418	0.098000	--
	406-593	alignment	2xseA_201	1-160	0.831600	OXIDOREDUCTASE
	594-832	alignment	3hnrA_302	1-193	0.387600	TRANSFERASE

PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA
TaxID	Species	Alignments	PSI-Blast Data (alignment with lowest E value)
			E value	Query Span	Sbjct Span	Bit Score	Identity	HSP Length	Accession	Description
5693	Trypanosoma cruzi	9 (6.0%)	0.0	1-832	1-832	1271	100	832	ref|XP_811851.1|	DnaJ chaperone protein [Trypanosoma cruzi strain CL Brener] ...
0	UNIDENTIFIED	12 (8.0%)	0.0	1-832	1-832	1226	98	832	gb|ESS65746.1|	DnaJ chaperone protein [Trypanosoma cruzi Dm28c]
85056	Trypanosoma cruzi marinkellei	3 (2.0%)	0.0	1-832	1-830	1233	91	832	gb|EKF30620.1|	DnaJ chaperone protein, putative [Trypanosoma cruzi marinkel...
1055687	Trypanosoma vivax Y486	3 (2.0%)	0.0	5-826	8-826	1114	56	825	emb|CCC53964.1|	putative DNA J-binding protein [Trypanosoma vivax Y486]
999953	Trypanosoma brucei brucei strain 927/4 GUTat10.1	3 (2.0%)	0.0	35-826	41-834	1045	54	802	ref|XP_829420.1|	chaperone protein DnaJ [Trypanosoma brucei brucei strain 927...
679716	Trypanosoma brucei gambiense DAL972	3 (2.0%)	0.0	35-826	41-834	1045	53	802	sp|P86937.1|JBP1_TRYBB	RecName: Full=Thymine dioxygenase JBP1; AltName: Full=J-bind...
59799	Angomonas deanei	3 (2.0%)	0.0	41-693	24-678	874	50	661	gb|EPY31569.1|	DNA J-binding protein [Angomonas deanei]
5656	Crithidia fasciculata	1 (0.67%)	0.0	23-826	6-808	1097	49	809	sp|Q9U6M2.1|JBP1_CRIFA	RecName: Full=Thymine dioxygenase JBP1; AltName: Full=J-bind...
5661	Leishmania donovani	3 (2.0%)	0.0	22-826	5-808	1186	48	812	ref|XP_003858833.1|	DNA J-binding protein, putative [Leishmania donovani] emb|CB...
435258	Leishmania infantum JPCM5	3 (2.0%)	0.0	22-826	5-808	1183	48	812	ref|XP_001463611.1|	putative DNA J-binding protein [Leishmania infantum JPCM5] s...
347515	Leishmania major strain Friedlin	3 (2.0%)	0.0	22-826	5-808	1178	48	812	ref|XP_001681321.1|	putative DNA J-binding protein [Leishmania major strain Frie...
929439	Leishmania mexicana MHOM/GT/2001/U1103	3 (2.0%)	0.0	23-826	6-808	1178	48	811	ref|XP_003872831.1|	putative DNA J-binding protein [Leishmania mexicana MHOM/GT/...
134006	Phytomonas sp. isolate EM1	3 (2.0%)	0.0	23-830	6-806	1095	48	812	emb|CCW64618.1|	unnamed protein product [Phytomonas sp. isolate EM1]
28005	Strigomonas culicis	6 (4.0%)	0.0	26-828	13-809	1062	48	806	gb|EPY25659.1|	DNA J-binding protein [Strigomonas culicis] gb|EPY28890.1| D...
5689	Leishmania tarentolae	2 (1.33%)	0.0	23-826	6-808	1177	47	811	sp|Q9U6M1.1|JBP1_LEITA	RecName: Full=Thymine dioxygenase JBP1; AltName: Full=J-bind...
420245	Leishmania braziliensis MHOM/BR/75/M2904	3 (2.0%)	0.0	23-826	6-807	1145	47	810	ref|XP_001562766.1|	putative DNA J-binding protein [Leishmania braziliensis MHOM...
134013	Phytomonas sp. isolate Hart1	3 (2.0%)	0.0	23-830	6-806	1096	47	813	emb|CCW66736.1|	unnamed protein product [Phytomonas sp. isolate Hart1]
1068625	Trypanosoma congolense IL3000	2 (1.33%)	0.0	243-826	1-587	709	44	596	emb|CCC95890.1|	unnamed protein product [Trypanosoma congolense IL3000]
1168479	Persicivirga phage P12024L	1 (0.67%)	6E-59	67-281	40-262	236	31	227	ref|YP_006560425.1|	hypothetical protein P12024L_26 [Persicivirga phage P12024L]...
1287681	Eutypa lata UCREL1	4 (2.67%)	5E-7	161-258	402-505	64	29	105	gb|EMR62719.1|	hypothetical protein UCREL1_10347 [Eutypa lata UCREL1]