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Features and Secondary Structure
	1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330 . 340 . 350 . 360 . 370 . 380 . 390 . 400 . 410 . 420 . 430 . 440 . 450 . 460 . 470 . 480 . 490 . 500 . 510 . 520 . 530 . 540 . 550 . 560 . 570 . 580 . 590 . 600 . 610 . 620 . 630 . 640 . 650 . 660 . 670 . 680 . 690 . 700 . 710 . 720 . 730 . 740 . 750 . 760 . 770 . 780 . 790 . 800 . 810 . 820 . 830 .
	MRRQVKKVLREKADDSMKPGWDVYQPSNDVVYAFNHYMQGSQIDAEAREKAEKAFQEAVKKHPFHNNADHTVDFHGTTVFRNAKGKVCGVLIPKALPSFATSMAADVLECAVARTSLRSALFGGVSPNSGIAGYFDYRGTPVELKCRKTSFTYEHTKEWRSVFPMIDYTSAIYKAALPDHWKAQDAAVPDVVRIHGSPFSTLTVNERFRTASHTDNGDFDNGYGVLAVLKGEYSGLSLALDDYGVCFNMQPTDVLLFDTHLFHSNTELEAKEANATWNRLSCVFYYRAALGEQPCVEEYRRRLKKAKEEKSTSLSFNHIEQKDNGENTNKPAPVYPVSLTPFSCAASAWALRGCAAAMLTRLHGLVRENASLMTELFGEPVEVADGLPRRAPEEIIPVHKHTNVQMHYLGGFSEKGDILNEAMNKRHYLDKENLQKMFGEEFVNIWTQSRTHWLQLVKKEWEHQKETNPTRTRFSWNNTSAMNFAFFDLCDVAKQLMCGAFGDREVNKKEEQSFWGMFAAHLDNACINEIGMLQGSMGMHKLNVKLKDYNFGGTRYLKDMPPEEQERRRRRRLEIEQARRRAPICDSESGDWLRNEAFDYQTEDVAVNYEREQWITPENNAKRFGFPERGVYGAEGAATGTISVLIVLPKPTNHRQKTCELPTSREADRIMKNPAAQRLLCAKPCNIGLSTSSNKSRTVLCGNIRIDKVFDGGSVGGKMYDFVIMRHLLAATTGEREPLECLVRWTSLARYCTFVVEVDLLDRHHYILKSEIGEEYSAVSEICFSALYSATYARDKVNLRTTPCLLSFIDKSGNMLESRFKFNGSPLNTVAFVVRRREK
tmhmm (0)	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (2%)	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXX-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
coiled-coils (0%)	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (15%)	XXXXXXXXXXXXXXXX------------------------------------------------------------------------------------------------XXXXXXXXX--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------------------------------XXXXXXXXXXXXXXXXXXX------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------------------------------------XXXXXXXXXXXX-----------------------XXXXX-XX---------------------------------------------------------------------------------------------------------------------------------------------XX
psipred	--HHHHHHHHHH-----------------HHHHHHHHH---------HHHHHHHHHHHHH----------EE-----EEEE-----EEEEEE-----HHHHHHHHHHHHHHHHHHHHHHH-----------HHHHH------HHHH-----HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH---EEEE------EEEEEEEE---------------EEEEEE-------EEEEHH--EEEE-----EEEEE--------EEE--------EEEEEEEEEHHH-----HHHHHHHHHHHHHH----------EEE--------------------HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHH---------------HHHH-------------------HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHH---HHHH-HHHH-EEEEE-----EEE-----HHHHHHHHHHHHHHHHHHHH------------------------EEEHHH-----HHHHHHH------------------EEEEEE----------------HHHHHHHHH-HHHHHHHH----------------EEEE--EEEEEEE------------HHHHHHHH----HHHHHHHHHHHHHHH---EEEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHH----HHHHHH------EEEEEEE-------EEEEEEE----
sam	---HHHHHHHHH------------------EEE--------------HHHHHHHHHHHH------------EEE---EEEE----EEEEEEE-----HHHHHHHHHHHHHHHHHHHHHHHH---------EEEEE------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH------------EEEEEE-----------------EEEEEEEEEEE--HHHHHHHH--EE-----EEEEEE-------EEEEE------EEEEEEEEEEE-------HHHHHHHHHHHHHHH---------EEEE------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------------------------HHHHHHHHHHHHH-H----HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-------EEEE--HHHHHHHHHHHHHH-HHHHHHHHHH-----H-HHHHHHHHHHHHHHHHHHH---------EEE-EEE-------EEEEE---HHHHHHHHHHHHHHHHHHHH----EE-------------EEEEEEEE---------HH---------------------EEEEEEE-----HHHH----------HHHHHH-HHHHHHHHHH--------------------EEEEEE----HHHHHHHHHHHHHHHHH-------HHHHHHHHHHH--EEEEEEE--------EEE---HHH-HHHHHHHHHHHHHHHHH---EEEEE--HHHHHHHHHH--EEEEEEE-------EEEEEEE----
jufo	--HHHHHHHHH-----------------HHHHHHH-----------HHHHHHHHHHHHH-----------------EEEEE----EEEEEEEE-------HHHHHHHHHHHHHHHHH-------------------------EE---------HHHHH----HHHHHHHHHHHHHHHHHHHHHHHH----EEEEE-----EEEEEHHH--------------EEEEEEEE-----EEEEHHHH-EEE-----EEEEEE--------EEE---------EEEEEEEEHH-------HHHHHHHHHHHHHH--------EEEEE------------------HHHHHHHHHHHHHHHHHHHHHHHHHHH----EEHHH-------------------------------------HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------EE-------HHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHH----------------------------------HHHHHHHHHHHHHHHHH------------------------EEEHHHH--------HHHH------------------EEEEEEE-----------------HHHHHH--HHHHHHHHH---------------------EEEEEEEE----------EEEHHHHHH-----HHHHHHHHHHHHHH-EEEEEEEE-----EEEEEEHHH---HHHHHHHHHHHHHHHHH-----------HHHHH------EEEEEE--------EEEEEEEE---

# SignalP-4.0 gram+ predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    48	    0.216
  max. Y     3	    0.200
  max. S     2	    0.410
  mean S     1-2    0.407
       D     1-2    0.281    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.281 D-cutoff=0.450 Networks=SignalP-TM

Domain Repeats Prediction
Boundary	STD (+/-)	Consensus
--	--	--

Ginzu Domain Prediction 1
Domain	Span	Source	Reference Parent	Parent Span	Confidence	Annotations
	1-315	alignment	5cg8A_101	1-266	0.553600	--
	316-412	alignment	m315A_301	1-70	0.225000	--
	413-595	alignment	2xseA_201	1-160	0.842100	OXIDOREDUCTASE
	596-839	alignment	2obfA_304	1-258	0.316900	Transferase

Ginzu Domain Prediction 2
Domain	Span	Source	Reference Parent	Parent Span	Confidence	Annotations
	1-315	alignment	5cg8A_101	1-266	0.553600	--
	316-412	msa	m315A_301	1-70	0.225000	--
	413-595	alignment	2xseA_201	1-160	0.842100	OXIDOREDUCTASE
	596-839	alignment	2obfA_304	1-258	0.316900	Transferase

PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA
TaxID	Species	Alignments	PSI-Blast Data (alignment with lowest E value)
			E value	Query Span	Sbjct Span	Bit Score	Identity	HSP Length	Accession	Description
679716	Trypanosoma brucei gambiense DAL972	3 (1.73%)	0.0	1-839	1-839	1243	100	839	sp|P86937.1|JBP1_TRYBB	RecName: Full=Thymine dioxygenase JBP1; AltName: Full=J-bind...
999953	Trypanosoma brucei brucei strain 927/4 GUTat10.1	3 (1.73%)	0.0	1-839	1-839	1242	100	839	ref|XP_829420.1|	chaperone protein DnaJ [Trypanosoma brucei brucei strain 927...
85056	Trypanosoma cruzi marinkellei	3 (1.73%)	0.0	42-834	36-824	1112	54	798	gb|EKF30620.1|	DnaJ chaperone protein, putative [Trypanosoma cruzi marinkel...
1055687	Trypanosoma vivax Y486	3 (1.73%)	0.0	19-837	19-829	1093	53	823	emb|CCC53964.1|	putative DNA J-binding protein [Trypanosoma vivax Y486]
5693	Trypanosoma cruzi	9 (5.2%)	0.0	5-834	1-826	1104	51	837	ref|XP_811851.1|	DnaJ chaperone protein [Trypanosoma cruzi strain CL Brener] ...
0	UNIDENTIFIED	13 (7.51%)	0.0	5-834	1-826	1088	51	837	gb|ESS65746.1|	DnaJ chaperone protein [Trypanosoma cruzi Dm28c]
1068625	Trypanosoma congolense IL3000	2 (1.16%)	0.0	249-838	1-591	730	48	593	emb|CCC95890.1|	unnamed protein product [Trypanosoma congolense IL3000]
5661	Leishmania donovani	3 (1.73%)	0.0	43-834	19-808	1156	44	802	ref|XP_003858833.1|	DNA J-binding protein, putative [Leishmania donovani] emb|CB...
435258	Leishmania infantum JPCM5	3 (1.73%)	0.0	43-834	19-808	1154	44	802	ref|XP_001463611.1|	putative DNA J-binding protein [Leishmania infantum JPCM5] s...
929439	Leishmania mexicana MHOM/GT/2001/U1103	3 (1.73%)	0.0	43-834	19-808	1152	44	802	ref|XP_003872831.1|	putative DNA J-binding protein [Leishmania mexicana MHOM/GT/...
5689	Leishmania tarentolae	2 (1.16%)	0.0	43-834	19-808	1148	43	802	sp|Q9U6M1.1|JBP1_LEITA	RecName: Full=Thymine dioxygenase JBP1; AltName: Full=J-bind...
347515	Leishmania major strain Friedlin	3 (1.73%)	0.0	43-834	19-808	1144	43	802	ref|XP_001681321.1|	putative DNA J-binding protein [Leishmania major strain Frie...
420245	Leishmania braziliensis MHOM/BR/75/M2904	3 (1.73%)	0.0	44-834	20-807	1114	43	800	ref|XP_001562766.1|	putative DNA J-binding protein [Leishmania braziliensis MHOM...
134006	Phytomonas sp. isolate EM1	3 (1.73%)	0.0	40-834	17-802	1057	43	802	emb|CCW64618.1|	unnamed protein product [Phytomonas sp. isolate EM1]
28005	Strigomonas culicis	6 (3.47%)	0.0	44-835	24-808	1043	43	796	gb|EPY25659.1|	DNA J-binding protein [Strigomonas culicis] gb|EPY28890.1| D...
59799	Angomonas deanei	3 (1.73%)	0.0	19-707	2-695	867	43	702	gb|EPY31569.1|	DNA J-binding protein [Angomonas deanei]
5656	Crithidia fasciculata	1 (0.58%)	0.0	44-834	20-808	1066	42	800	sp|Q9U6M2.1|JBP1_CRIFA	RecName: Full=Thymine dioxygenase JBP1; AltName: Full=J-bind...
134013	Phytomonas sp. isolate Hart1	3 (1.73%)	0.0	49-834	25-802	1049	42	793	emb|CCW66736.1|	unnamed protein product [Phytomonas sp. isolate Hart1]
1168479	Persicivirga phage P12024L	1 (0.58%)	9E-64	73-325	40-284	252	31	265	ref|YP_006560425.1|	hypothetical protein P12024L_26 [Persicivirga phage P12024L]...
597362	Agaricus bisporus var. burnettii JB137-S8	1 (0.58%)	1E-6	196-285	34-123	63	25	96	gb|EKM73596.1|	hypothetical protein AGABI1DRAFT_49583, partial [Agaricus bi...