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Job 81182 [SSGCID - MygeA.01024.a] [2018-02-01] [D-172-16-30-137.dhcp4.x.x] [Structure] [Complete] Enolase - BATCH:81172

Full Structure Predictions  
Model 1

 chemical/x-pdb  MIME type  PDB file
Model 2

 chemical/x-pdb  MIME type  PDB file
Model 3

 chemical/x-pdb  MIME type  PDB file
Model 4

 chemical/x-pdb  MIME type  PDB file
Model 5

 chemical/x-pdb  MIME type  PDB file

Click the icons below each image to download the prediction in PDB format ( PDB file )

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Features and Secondary Structure  
 
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MGSSNLNINSKITDIFAYQVFDSRGVPTVACVVKLASGHVGEAMVPSGASTGEKEAIELRDNDPKNYFGKGVNEAVDNVNKVIAPKLIGLNAFDQLTVDQAMIKLDNTPNKAKLGANAILSVSLAVSKAAAKAQNSSLFQYISNKLIGLNTTNFVLPVPMLNVINGGAHADNYIDFQEFMIMPLGAKKMHEALKMASETFHALQNLLKKRGLNTNKGDEGGFAPNLKLAEDALDIMVEAIKLAGYKPWDDIAIAIDVAASEFYDEDKKLYVFKKGIKANILNAKDWSLTSKEMIAYLEKLTKKYPIISIEDGLSENDWEGMNQLTKTIGSHIQIVGDDTYCTNAELAKKGVAQNTTNSILIKLNQIGSISETIQTIEVAKKANWSQVISHRSGETEDTTIADLAVAAQTGQIKTGSMSRSERIAKYNRLLYIEIELGDKGKYLGWNTFTNIKPKNFNI
tmhmm (0)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (5%)
-----------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXX-------------------------------------------------------------------------------------------------------------------XXXXXXXXXXX-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
coiled-coils (0%)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (5%)
XXXXXXXXXXXXX-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXX--------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXX
psipred
----------EEEEEEEEEEE------EEEEEEEE----EEEEEEE-----------------HHHH----EEEHHHHHHHHHHHHH----HHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHH---HHHHHHHHH---------HHHHHHH----HH---------EEEEEE-----HHHHHHHHHHHHHHHHHHHHH-------------------HHHHHHHHHHHHHH--------EEEEE-HHHHHH------EEE------------------HHHHHHHHHHHHHH--HHEEHHHH---HHHHHHHHHHH----EEEE--------HHHHHHHHHH---------HHHH---HHHHHHHHHHHH---EEEE---------HHHHHHHHHH---HHH------HHHHHHHHHHHHHHHH-----EE--HHH-----------

# SignalP-4.0 gram+ predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    50	    0.301
  max. Y    50	    0.313
  max. S    40	    0.509
  mean S     1-49   0.222
       D     1-49   0.278    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.278 D-cutoff=0.450 Networks=SignalP-TM


Domain Repeats Prediction     Top
  Boundary     STD (+/-)     Consensus  
------


Ginzu Domain Prediction 1       Top
Domain Span Source Reference Parent   Parent Span     Confidence     Annotations  
  1-458     alignment     2pa6A_204     1-427   0.9090   LYASE


PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA       Top
TaxID Species Alignments PSI-Blast Data (alignment with lowest E value)
E value Query Span Sbjct Span Bit Score Identity HSP Length Accession Description
662947Mycoplasma genitalium M22881 (0.03%)1E-1691-4581-458601100458ref|YP_006601455.1|enolase [Mycoplasma genitalium M2288] ref|WP_014894692.1| en...
662946Mycoplasma genitalium M62821 (0.03%)1E-1691-4581-458601100458ref|YP_006600441.1|enolase [Mycoplasma genitalium M6282] ref|WP_014894324.1| en...
662945Mycoplasma genitalium M63201 (0.03%)1E-1691-4581-45860199458ref|YP_006600951.1|enolase [Mycoplasma genitalium M6320] ref|WP_014894501.1| en...
267872Microcystis aeruginosa PCC 78061 (0.03%)6E-28369-4431-751326975emb|CAO88846.1|unnamed protein product [Microcystis aeruginosa PCC 7806]
419109Vibrio parahaemolyticus AQ38101 (0.03%)9E-32356-4466-961456391ref|WP_005462138.1|phosphopyruvate hydratase [Vibrio parahaemolyticus] gb|EDM56...
391591Vibrio shilonii AK11 (0.03%)5E-28365-4461-821326382ref|WP_006075620.1|phosphopyruvate hydratase, partial [Vibrio shilonii] gb|EDL5...
5476Candida albicans1 (0.03%)7E-5388-4211-34566234gb|AAB21854.1|46 kda IgE-binding antigen [Candida albicans, Peptide Partia...
340047Mycoplasma capricolum subsp. capricolum ATCC 273431 (0.03%)3E-1854-1151-62996162emb|CAA83808.1|enolase [Mycoplasma capricolum subsp. capricolum ATCC 27343]
186741uncultured Geobacter sp.3 (0.09%)7E-32171-2631-931456093gb|ABR01081.1|enolase, partial [uncultured Geobacter sp.]
766747synthetic Mycoplasma mycoides JCVI-syn1.01 (0.03%)1E-1719-4531-45160757461gb|ACU78724.1|phosphopyruvate hydratase [Mycoplasma mycoides subsp. capri ...
0UNIDENTIFIED168 (4.87%)0.09-4531-43067656445ref|WP_021902082.1|enolase [Coprobacillus sp. CAG:698] emb|CCY07957.1| enolase ...
546269Filifactor alocis ATCC 358961 (0.03%)0.012-4543-43066356443ref|YP_005054704.1|phosphopyruvate hydratase [Filifactor alocis ATCC 35896] ref...
387090Bacteroides coprophilus1 (0.03%)0.011-4432-42165056433ref|WP_008139897.1|enolase [Bacteroides coprophilus] gb|EEF74663.1| phosphopyru...
665938Bacteroides sp. 2_1_56FAA1 (0.03%)0.011-4462-42464856436ref|WP_009291773.1|enolase [Bacteroides sp. 2_1_56FAA] gb|EGM97877.1| enolase [...
1073386Bacteroides fragilis HMW 6101 (0.03%)0.011-4462-42464856436ref|WP_005775910.1|enolase [Bacteroides] gb|EFR51799.1| phosphopyruvate hydrata...
1073387Bacteroides fragilis HMW 6151 (0.03%)0.011-4462-42464856436ref|YP_098472.1|enolase [Bacteroides fragilis YCH46] ref|YP_210824.1| putati...
1073388Bacteroides fragilis HMW 6161 (0.03%)0.011-4462-42464756436ref|WP_005818764.1|enolase [Bacteroides fragilis] gb|EKA82769.1| enolase [Bacte...
293826Alkaliphilus metalliredigens QYMF1 (0.03%)0.09-4531-43064456445ref|YP_001321357.1|phosphopyruvate hydratase [Alkaliphilus metalliredigens QYMF...
679199Alloprevotella rava F03231 (0.03%)1E-17911-4432-43063656435ref|WP_009347172.1|enolase [Alloprevotella rava] gb|EHG23401.1| enolase [Allopr...
1231336Lactobacillus shenzhenensis LY-731 (0.03%)1E-1799-4531-43063456445ref|WP_022528606.1|Eno2 [Lactobacillus shenzhenensis] gb|ERL66229.1| Eno2 [Lact...






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