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Job 81186 [SSGCID - MygeA.17877.a] [2018-02-01] [D-172-16-30-137.dhcp4.x.x] [Structure] [Complete] Peptidyl-tRNA hydrolase - BATCH:81172

Full Structure Predictions  
Model 1

 chemical/x-pdb  MIME type  PDB file
Model 2

 chemical/x-pdb  MIME type  PDB file
Model 3

 chemical/x-pdb  MIME type  PDB file
Model 4

 chemical/x-pdb  MIME type  PDB file
Model 5

 chemical/x-pdb  MIME type  PDB file

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Features and Secondary Structure  
 
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MPTYKLIVGLGNLGKKYEKTRHNAGFMVLDRLASLFHLNFDKTNKLGDYLFIKEKAAILAKPATFMNNSGLFVKWLQDHFQIPLANIMIVHDEIAFDLGVIRLKMQGSANNHNGIKSVIRHLDTEQFNRLRFGIKSQNTSNILHEQVMSEFQNSELTKLEVAITKSVELLKRYIEGEELQRLMEYYHHG
tmhmm (0)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (0%)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
coiled-coils (0%)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (5%)
X---------------------------------------------------------------------------------------------------------XXXXX---------------------------------------------------------------------------XXX
psipred
----EEEEE-----HHH--------HHHHHHHHHH------EE--EEEEEE---EEEEE----HHHH---HHHHHHHHHH-----EEEEEE--------EEEEE----------HHHHHHH-----EEEEEEE-------------------HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH---

# SignalP-4.0 gram+ predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    25	    0.110
  max. Y    19	    0.126
  max. S    11	    0.187
  mean S     1-18   0.145
       D     1-18   0.134    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.134 D-cutoff=0.450 Networks=SignalP-TM


Domain Repeats Prediction     Top
  Boundary     STD (+/-)     Consensus  
------


Ginzu Domain Prediction 1       Top
Domain Span Source Reference Parent   Parent Span     Confidence     Annotations  
  1-189     alignment     3kjzA_201     1-191   0.9092   HYDROLASE


PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA       Top
TaxID Species Alignments PSI-Blast Data (alignment with lowest E value)
E value Query Span Sbjct Span Bit Score Identity HSP Length Accession Description
662947Mycoplasma genitalium M22881 (0.04%)3E-581-1891-189230100189ref|NP_072745.1|peptidyl-tRNA hydrolase [Mycoplasma genitalium G37] ref|YP_0...
1121865Enterococcus columbae DSM 7374 = ATCC 512631 (0.04%)1E-764-1871-18629141186ref|WP_016183974.1|peptidyl-tRNA hydrolase [Enterococcus columbae] gb|EOT39567....
712961Lactobacillus salivarius CECT 57131 (0.04%)7E-744-1871-18528241186ref|YP_005864186.1|Peptidyl-tRNA hydrolase (PTH) [Lactobacillus salivarius CECT...
748449Halobacteroides halobius DSM 51501 (0.04%)2E-734-1871-18528041186ref|YP_007314214.1|peptidyl-tRNA hydrolase [Halobacteroides halobius DSM 5150] ...
1108963Lactobacillus salivarius SMXD511 (0.04%)2E-734-1871-18528041186ref|WP_003703198.1|peptidyl-tRNA hydrolase [Lactobacillus salivarius] gb|EFK797...
1041521Lactobacillus salivarius GJ-241 (0.04%)4E-733-18715-20027941187ref|WP_004564204.1|peptidyl-tRNA hydrolase [Lactobacillus salivarius] gb|EGM521...
525364Lactobacillus salivarius ATCC 117411 (0.04%)4E-733-18715-20027941187ref|WP_003701374.1|peptidyl-tRNA hydrolase [Lactobacillus salivarius] gb|EEJ741...
46469Orenia marismortui1 (0.04%)8E-734-1871-18427841186ref|WP_018248276.1|hypothetical protein [Orenia marismortui]
1273133Lactobacillus salivarius cp4001 (0.04%)2E-724-1871-18527741186emb|CDK34955.1|Peptidyl-tRNA hydrolase (PTH) [Lactobacillus salivarius cp40...
526975Bacillus cereus BDRD-ST261 (0.04%)3E-622-13920-15924341140ref|WP_002026814.1|peptidyl-tRNA hydrolase [Bacillus cereus] gb|EEL02769.1| Pep...
1046596Lactobacillus mali KCTC 3596 = DSM 204441 (0.04%)8E-754-1881-18628540187ref|WP_003687302.1|peptidyl-tRNA hydrolase [Lactobacillus mali] gb|EJF01983.1| ...
655812Aerococcus viridans ATCC 115631 (0.04%)2E-743-18834-22128440188ref|WP_003142477.1|peptidyl-tRNA hydrolase [Aerococcus viridans] gb|EFG49684.1|...
1182762Enterococcus sp. C11 (0.04%)3E-744-1871-18628340186ref|WP_008380153.1|peptidyl-tRNA hydrolase [Enterococcus sp. C1] gb|EJF49250.1|...
1259825Enterococcus casseliflavus 14-MB-W-141 (0.04%)3E-744-1871-18628340186ref|YP_007754142.1|peptidyl-tRNA hydrolase [Enterococcus casseliflavus EC20] re...
1260358Enterococcus faecalis 06-MB-DW-091 (0.04%)5E-743-1876-19228240187ref|WP_005233344.1|peptidyl-tRNA hydrolase [Enterococcus] gb|EGC70522.1| aminoa...
362948Lactobacillus salivarius UCC1181 (0.04%)1E-724-1871-18527840186ref|YP_536249.1|peptidyl-tRNA hydrolase [Lactobacillus salivarius UCC118] re...
608538Hydrogenobacter thermophilus TK-61 (0.04%)5E-654-1882-18725240187ref|YP_003431784.1|peptidyl-tRNA hydrolase [Hydrogenobacter thermophilus TK-6] ...
562981Gemella haemolysans M3411 (0.04%)2E-644-1871-18525040186ref|WP_003146417.1|peptidyl-tRNA hydrolase [Gemella haemolysans] gb|EGF86564.1|...
546270Gemella haemolysans ATCC 103791 (0.04%)6E-644-1871-18524940186ref|WP_003144984.1|peptidyl-tRNA hydrolase [Gemella haemolysans] gb|EER67658.1|...
655186uncultured SUP05 cluster bacterium1 (0.04%)2E-493-1352-13720040136gb|EEZ80198.1|peptidyl-tRNA hydrolase [uncultured SUP05 cluster bacterium]






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