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Features and Secondary Structure
	1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330 . 340 . 350 .
	MDFDKQLFFNVEKIVELTEQLEKDLNKPNLSFEQIKVINKELKHKQPLIVKFKELQKLVENANEAEQILNNSSLKELHEEAKKELEKIKASLPSLEEEIKFLLLPVDENNQKNVIVEIRPAAGGDESCIFLSDLFNMYKNYCTSKNWTVELNEIIPASVGINFVSFAVNGTDVFAKLKFESGVHRVQRVPLTEAKGRVHTSTVTVAVLPQLEEVEITINPSDLRIDTYRASGAGGQHVNRTESAVRITHLPTGIVVACQEGKSQFSNRDKAMKMLRAKLWENAQNKQLSTQADLRKSQVGSGERAEKIRTYNYPQNRITDHRIKLTINKLNTVILGDLDEIIEALQADEKKQQLEKFIS
tmhmm (0)	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (6%)	-----------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXX---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
coiled-coils (13%)	---------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (11%)	XXXXX---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXX-X----------XXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------------------XXX
psipred	----HHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------EEEE-------HHHHHHHHHHHHHHHHHHH----EEEE--------EEEEEEEE----HHHHHHH----EEEEEE----------EEEEEEEEE-----------HHHHHHEEE---------------EEEEEE----EEEEEEE---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------EEEE-------------EE--HHHHH---HHHHHHHHHHHHHHHHHHHH--

# SignalP-4.0 euk predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    61	    0.107
  max. Y     2	    0.112
  max. S     1	    0.124
  mean S     1-1    0.124
       D     1-1    0.119    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.119 D-cutoff=0.450 Networks=SignalP-noTM

Domain Repeats Prediction
Boundary	STD (+/-)	Consensus
--	--	--

Ginzu Domain Prediction 1
Domain	Span	Source	Reference Parent	Parent Span	Confidence	Annotations
	1-359	alignment	4v67AX_302	1-362	0.5643	--

PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA
TaxID	Species	Alignments	PSI-Blast Data (alignment with lowest E value)
			E value	Query Span	Sbjct Span	Bit Score	Identity	HSP Length	Accession	Description
565575	Ureaplasma urealyticum serovar 10 str. ATCC 33699	1 (0.03%)	1E-108	1-357	1-357	396	56	357	ref|YP_002284416.1|	peptide chain release factor 1 [Ureaplasma urealyticum serov...
626096	Ureaplasma urealyticum serovar 2 str. ATCC 27814	1 (0.03%)	1E-108	1-357	1-357	396	56	357	ref|WP_004026000.1|	peptide chain release factor 1 [Ureaplasma urealyticum] gb|E...
561177	Anaerococcus hydrogenalis DSM 7454	1 (0.03%)	1E-100	99-357	1-260	373	52	260	ref|WP_004815192.1|	peptide chain release factor 1 [Anaerococcus hydrogenalis] g...
866629	Mycoplasma leachii 99/014/6	1 (0.03%)	1E-115	3-356	1-357	421	51	357	ref|YP_004046951.1|	peptide chain release factor 1 [Mycoplasma leachii PG50] ref...
766747	synthetic Mycoplasma mycoides JCVI-syn1.0	1 (0.03%)	1E-114	3-356	1-357	418	51	357	gb|ACU78690.1|	peptide chain release factor 1 [Mycoplasma mycoides subsp. c...
862259	Mycoplasma mycoides subsp. capri LC str. 95010	1 (0.03%)	1E-114	3-356	1-357	418	51	357	ref|YP_004399840.1|	peptide chain release factor 1 [Mycoplasma mycoides subsp. c...
406557	Streptococcus pneumoniae SP6-BS73	2 (0.05%)	8E-98	70-357	4-292	363	51	289	ref|WP_001809568.1|	peptide chain release factor 1 [Streptococcus pneumoniae] gb...
720554	Clostridium clariflavum DSM 19732	1 (0.03%)	1E-136	7-356	1-353	491	50	353	ref|YP_005044950.1|	peptide chain release factor 1 (bRF-1) [Clostridium clarifla...
1161424	Fusobacterium necrophorum subsp. funduliforme Fnf 1007	1 (0.03%)	1E-119	7-356	1-355	434	50	355	ref|WP_005952801.1|	peptide chain release factor 1 [Fusobacterium necrophorum] g...
1204476	Fusobacterium nucleatum CTI-3	1 (0.03%)	1E-115	7-356	1-354	421	50	354	ref|WP_008700024.1|	peptide chain release factor 1 [Fusobacterium nucleatum] gb|...
1316586	Fusobacterium nucleatum CTI-5	1 (0.03%)	1E-115	7-356	1-354	421	50	354	ref|YP_008019047.1|	peptide chain release factor 1 [Fusobacterium nucleatum subs...
999414	Fusobacterium nucleatum subsp. animalis F0419	1 (0.03%)	1E-114	7-356	1-354	419	50	354	ref|WP_005909560.1|	peptide chain release factor 1 [Fusobacterium nucleatum] gb|...
936562	Fusobacterium sp. CM21	1 (0.03%)	1E-114	7-356	1-354	418	50	354	ref|YP_008477076.1|	peptide chain release factor 1 [Fusobacterium nucleatum subs...
860	Fusobacterium periodonticum	2 (0.05%)	1E-114	7-356	1-354	418	50	354	ref|WP_008793421.1|	peptide chain release factor 1 [Fusobacterium periodonticum]...
620833	Fusobacterium periodonticum D10	1 (0.03%)	1E-114	7-356	1-354	417	50	354	ref|WP_005968985.1|	peptide chain release factor 1 [Fusobacterium periodonticum]...
1032505	Fusobacterium sp. OBRC1	1 (0.03%)	1E-114	7-356	1-354	416	50	354	ref|WP_005896109.1|	peptide chain release factor 1 [Fusobacterium nucleatum] gb|...
401526	Thermosinus carboxydivorans Nor1	2 (0.05%)	1E-136	7-357	1-355	489	49	355	ref|WP_007289548.1|	peptide chain release factor 1 [Thermosinus carboxydivorans]...
81464	Anaeromusa acidaminophila	1 (0.03%)	1E-132	7-358	1-355	476	49	355	ref|WP_018702856.1|	peptide chain release factor 1 [Anaeromusa acidaminophila]
35830	Acetivibrio cellulolyticus	1 (0.03%)	1E-132	7-354	1-351	476	49	351	ref|WP_010246372.1|	peptide chain release factor 1 [Acetivibrio cellulolyticus]
626939	Phascolarctobacterium succinatutens YIT 12067	1 (0.03%)	1E-131	7-357	1-354	474	49	354	ref|WP_009146079.1|	peptide chain release factor 1 [Phascolarctobacterium succin...