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Job 81207 [SSGCID - MygeA.20059.a] [2018-02-01] [D-172-16-30-137.dhcp4.x.x] [Structure] [Complete] Probable cytosol aminopeptidase - BATCH:81172

Full Structure Predictions  
Model 1

 chemical/x-pdb  MIME type  PDB file
Model 2

 chemical/x-pdb  MIME type  PDB file
Model 3

 chemical/x-pdb  MIME type  PDB file
Model 4

 chemical/x-pdb  MIME type  PDB file
Model 5

 chemical/x-pdb  MIME type  PDB file

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Features and Secondary Structure  
 
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MRINKPFSDDSNTVVFVSSKTYGVKEEAAHNPNVEFGVVLPTDFPAFNRALVQFLKRKKTKLNINLDSLIELYKKNENSGCFHTAIKTVITSVTFCETTPFTMKTKPEKNVEVAVQCAVEYHNLVKEYETVGEYVNLARELQDTPSDLLYSEVFVKHFEKAASKLPVKIKVLKQSDLIKKKMGLLLGVNQGSEREARLLVISYQANKNSKEKLAFVGKGITYDSGGMNIKTGDYMRGMKYDMSGAAIVCSTVLALAKNKVKTNVVAVAALTENLPGAKAQRPDDIKIAYNGKSVEIDNTDAEGRLVLADAITYAAKDLAATHIIDVATLTGLMSYILSTTYTGIFSTCDHQWESFKKAACSAGEPVWRLPMHPDYLKPLQLTKLADLQNSTSARGAGSSRAACFLAEFREGVSLIHCDIASTASIENLGQGVLVRTLYERASQLANK
tmhmm (0)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (7%)
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXX----------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXX---------------------------------------------
coiled-coils (5%)
---------------------------------------------------XXXXXXXXXXXXXXXXXXXXX---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (4%)
XXX------------------------------------------------------------------------------------------------XXXXXXXXXXXX----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XX
psipred
-------------EEEE------HHHHHHHH-HHHEEE-----HHHHHHHHHHHHHH------EEEHHHHHH----HHHHHHHHHHHHHHHHHEE---------------EEEEE---HHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH----EEEE--HHHHH---EEEEE---------EEEEEEE--------EEEEE--EEEEE----------HHHH-------HHHHHHHHHHHHHH----EEEEEEE-HHH-----------EEEE----EEEEE-------HHHHHHHHHHHH-----EEE----HHHHHHHH------------HHHHHHHHHHHHHH----------HHHHH------HHHH-------------HHHHHH-------EEEEE-------------HHHHHHHHHHHHHH--

# SignalP-4.0 gram+ predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    29	    0.194
  max. Y    29	    0.204
  max. S     1	    0.302
  mean S     1-28   0.204
       D     1-28   0.204    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.204 D-cutoff=0.450 Networks=SignalP-TM


Domain Repeats Prediction     Top
  Boundary     STD (+/-)     Consensus  
------


Ginzu Domain Prediction 1       Top
Domain Span Source Reference Parent   Parent Span     Confidence     Annotations  
  1-447     alignment     4zi6A_303     1-484   0.8195   --


PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA       Top
TaxID Species Alignments PSI-Blast Data (alignment with lowest E value)
E value Query Span Sbjct Span Bit Score Identity HSP Length Accession Description
662947Mycoplasma genitalium M22881 (0.03%)1E-1331-4471-447482100447ref|YP_006599942.1|multifunctional aminopeptidase A [Mycoplasma genitalium M232...
488339synthetic Mycoplasma genitalium JCVI-1.01 (0.03%)1E-1321-4471-447478100447ref|NP_073064.1|leucyl aminopeptidase [Mycoplasma genitalium G37] ref|WP_009...
1006581Mycoplasma gallisepticum S61 (0.03%)1E-1025-4386-43837853440ref|YP_005880655.1|cytosol aminopeptidase [Mycoplasma gallisepticum str. F] ref...
710128Mycoplasma gallisepticum str. R(high)1 (0.03%)1E-1015-4386-43837652440ref|NP_853235.2|leucyl aminopeptidase [Mycoplasma gallisepticum str. R(low)]...
280702Mycoplasma phage phiMFV11 (0.03%)1E-10476-4412-37338442372gb|AAT65057.1|putative leucine aminopeptidase, partial [Mycoplasma phage p...
554373Moniliophthora perniciosa FA5531 (0.03%)3E-37159-2953-13916342137ref|XP_002396291.1|hypothetical protein MPER_03506 [Moniliophthora perniciosa F...
626096Ureaplasma urealyticum serovar 2 str. ATCC 278141 (0.03%)1E-1145-44414-45241741444ref|YP_002284954.1|leucyl aminopeptidase [Ureaplasma urealyticum serovar 10 str...
2133Spiroplasma citri1 (0.03%)1E-1131-44311-45041439445emb|CAK99734.1|putative leucyl aminopeptidase transmembrane protein [Spirop...
872331Mycoplasma hyorhinis HUB-11 (0.03%)1E-11120-44131-45640939426ref|YP_003856044.1|aminopeptidase [Mycoplasma hyorhinis HUB-1] ref|WP_013301869...
766747synthetic Mycoplasma mycoides JCVI-syn1.02 (0.06%)1E-11025-43932-44740439420gb|ACU78585.1|leucyl aminopeptidase [Mycoplasma mycoides subsp. capri str....
326424Frankia alni ACN14a2 (0.06%)2E-95134-441271-60135639332ref|YP_716233.1|leucine aminopeptidase [Frankia alni ACN14a] ref|WP_01160714...
467200Streptomyces griseoflavus Tu40001 (0.03%)1E-89116-44550-38433639339ref|WP_004932059.1|leucyl aminopeptidase, partial [Streptomyces griseoflavus] g...
4577Zea mays2 (0.06%)1E-87182-4431-26633039269ref|NP_001168170.1|uncharacterized protein LOC100381923 [Zea mays] gb|ACN27317....
4043Petroselinum crispum1 (0.03%)1E-86167-44110-28932739283emb|CAA68143.1|cytosol aminopeptidase [Petroselinum crispum]
496833Mycoplasma fermentans PG182 (0.06%)1E-1163-44126-46542438446ref|YP_007762156.1|hypothetical protein [Mycoplasma fermentans PG18] ref|WP_015...
943945Mycoplasma fermentans M641 (0.03%)1E-1163-44116-45542338446ref|YP_003923203.1|cytosol aminopeptidase [Mycoplasma fermentans JER] ref|YP_00...
747682Mycoplasma alligatoris A21JP22 (0.06%)1E-1112-44313-45540738449ref|WP_005683402.1|peptidase M17 [Mycoplasma alligatoris] gb|EFF41692.1| cytoso...
243272Mycoplasma arthritidis 158L3-12 (0.06%)1E-10817-44330-45739938429ref|YP_002000248.1|leucyl aminopeptidase [Mycoplasma arthritidis 158L3-1] ref|W...
1003195Streptomyces cattleya NRRL 8057 = DSM 464881 (0.03%)1E-9789-443134-50136338372ref|YP_004910829.1|cytosol aminopeptidase [Streptomyces cattleya NRRL 8057 = DS...
417399Vibrio cholerae NCTC 84572 (0.06%)4E-89216-4461-23133538234ref|WP_001900713.1|aminopeptidase [Vibrio cholerae] gb|EAZ71640.1| aminopeptida...






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