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Features and Secondary Structure
	1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 .
	MVPPTIPELVARAGKLPFLCDHLALADGAQGAYARLRDFRLESVYEPIYDVSMPGAPQSTSLSDAIERYGDELGFQAVTHAGGAPFDPIGAVADDQELVALDRLARSLHAINFFGAQRHGLLFLRVHERLLKSVKYDHGKHFSTVLKGFGLPPERIVIELPAAAVAHKTFLGYLTKSYQHYGFKVADKLPDPGRILAVESDMARPDYIKMDAAIALREGMVKALVGYAQRVRIPLIFDHVVDETQFELLRQYDVRLVQGPVFSQPAAV
tmhmm (0)	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (0%)	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
coiled-coils (0%)	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (1%)	X--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------X
psipred	-----HHHHHHHHH--HHHHHHHHHHHHHHHHHHHH---EEEEEE---EE-----EEEEEEEEEE------EE-HHHH------HHHHHHHHHH---HHHHHHHHHHHHHHHHHH-----EEEEEE-HHHH------HHHHHHHHHHHH---HHHEEEEE-------HHHHHHHHHHHHH---EEEEE-------HHHHHHH----EEEE-HHHH--HHHHHHHHHHHHH---EEEEE----HHHHHHHHH----EE-----------

# SignalP-4.0 gram- predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    27	    0.247
  max. Y    27	    0.205
  max. S    26	    0.243
  mean S     1-26   0.168
       D     1-26   0.187    0.570  NO
Name=tmp_signalp_seq	SP='NO' D=0.187 D-cutoff=0.570 Networks=SignalP-noTM

Domain Repeats Prediction
Boundary	STD (+/-)	Consensus
--	--	--

Ginzu Domain Prediction 1
Domain	Span	Source	Reference Parent	Parent Span	Confidence	Annotations
	1-268	alignment	4rnhA_201	1-423	0.7099	--

PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA
TaxID	Species	Alignments	PSI-Blast Data (alignment with lowest E value)
			E value	Query Span	Sbjct Span	Bit Score	Identity	HSP Length	Accession	Description
1249659	Burkholderia pseudomallei MSHR520	2 (0.05%)	1E-63	1-268	1-268	249	100	268	ref|YP_002898034.1|	cyclic diguanylate phosphodiesterase [Burkholderia pseudomal...
1249471	Burkholderia pseudomallei MSHR146	4 (0.1%)	3E-63	1-268	1-268	248	100	268	ref|YP_109340.1|	hypothetical protein BPSL2744 [Burkholderia pseudomallei K96...
320372	Burkholderia pseudomallei 1710b	1 (0.03%)	4E-63	1-268	39-306	247	100	268	ref|YP_103641.1|	diguanylate phosphodiesterase [Burkholderia mallei ATCC 2334...
28450	Burkholderia pseudomallei	7 (0.18%)	4E-63	1-268	1-268	247	99	268	ref|WP_009966980.1|	diguanylate phosphodiesterase [Burkholderia pseudomallei]
271848	Burkholderia thailandensis E264	1 (0.03%)	8E-64	1-268	55-322	250	97	268	ref|YP_441939.1|	EAL domain-containing protein [Burkholderia thailandensis E2...
1249661	Burkholderia thailandensis MSMB121	2 (0.05%)	3E-63	1-268	1-268	248	97	268	ref|YP_007917370.1|	EAL domain protein [Burkholderia thailandensis MSMB121] ref|...
441157	Burkholderia thailandensis MSMB43	4 (0.1%)	3E-63	1-268	1-268	247	97	268	ref|WP_006025449.1|	diguanylate phosphodiesterase [Burkholderia thailandensis] g...
1249663	Burkholderia thailandensis H0587	1 (0.03%)	7E-63	1-268	1-268	247	97	268	ref|WP_009904139.1|	diguanylate phosphodiesterase [Burkholderia thailandensis] g...
1241582	Burkholderia thailandensis 2002721723	2 (0.05%)	5E-63	1-268	1-268	247	97	268	ref|WP_009889409.1|	diguanylate phosphodiesterase [Burkholderia thailandensis] g...
1249662	Burkholderia thailandensis E444	3 (0.07%)	3E-62	1-268	1-268	244	96	268	gb|AHI79190.1|	EAL domain protein [Burkholderia thailandensis E444]
342113	Burkholderia oklahomensis	6 (0.15%)	3E-61	1-268	1-268	241	95	268	ref|WP_010106018.1|	diguanylate phosphodiesterase [Burkholderia oklahomensis]
1177928	Thalassospira profundimaris WP0211	1 (0.03%)	4E-58	24-267	107-348	231	25	253	ref|WP_008890678.1|	signal peptide protein [Thalassospira profundimaris] gb|EKF0...
626418	Burkholderia glumae BGR1	5 (0.12%)	2E-58	23-267	15-256	231	25	253	ref|YP_002910915.1|	diguanylate phosphodiesterase [Burkholderia glumae BGR1] ref...
572477	Allochromatium vinosum DSM 180	5 (0.12%)	8E-65	1-268	13-266	253	24	276	ref|YP_003442861.1|	diguanylate phosphodiesterase [Allochromatium vinosum DSM 18...
985076	Burkholderia cenocepacia K56-2Valvano	1 (0.03%)	4E-60	5-267	2-259	237	24	271	ref|WP_006492237.1|	cyclic diguanylate phosphodiesterase (EAL) domain protein [B...
985077	Burkholderia cenocepacia BC7	4 (0.1%)	4E-60	5-267	2-259	237	24	271	ref|YP_002229810.1|	putative diguanylate phosphodiesterase [Burkholderia cenocep...
482957	Burkholderia lata	4 (0.1%)	1E-59	5-267	2-259	236	24	271	ref|YP_370528.1|	diguanylate phosphodiesterase [Burkholderia lata] ref|WP_011...
350702	Burkholderia cenocepacia PC184	2 (0.05%)	2E-59	5-267	2-259	235	24	271	ref|WP_006477642.1|	diguanylate phosphodiesterase [Burkholderia cenocepacia] gb|...
196015	Caldimonas manganoxidans	1 (0.03%)	1E-58	26-268	10-252	232	24	253	ref|WP_019559889.1|	hypothetical protein [Caldimonas manganoxidans]
331272	Burkholderia cenocepacia HI2424	2 (0.05%)	7E-58	10-265	3-253	230	24	264	ref|YP_620620.1|	diguanylate phosphodiesterase [Burkholderia cenocepacia AU 1...