Features and Secondary Structure |
| 1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330 . 340 . 350 . 360 . 370 . 380 . 390 . 400 . 410 . |
| MHLSELKSLHVSELIEMANGLEIENANRLRKQELMFAILKKRAKTGETIFGDGTLEVLPDGFGFLRSPEMSYLASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVNGQPPEASKHKIMFENLTPLHPNKPLWLEREMRGEENVTGRIIDMIAPIGKGQRGLLVASPKSGKTVMLQHIAHAIKQNHPDVILFVLLIDERPEEVTEMQRSVAGEVIASTFDEPATRHVQVAEMVIEKAKRLVEMKHDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINLNKSGTRREEMLIKPEILQKIWVLRKFIHDMDEVEAMEFLLDKIRQTKNNAEFFDLMRRGG |
tmhmm (0) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
low complexity (0%) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
coiled-coils (0%) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
disordered (4%) | X-XX-XX--------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXX-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XX |
psipred | --HHHHH---HHHHHHHHHH----------HHHHHHHHHHH------EEEEEEEEEE---------------------EEE-HHH----------EEEE------------EEEEEE------HHH-------------------HHH----------HHHHHHH-------EEEEE-----HHHHHHHHHHHHHHH----EEEEEEEE------HHHHHHH----EEEE-----HHHHHHHHHHHHHHHHHHHH----EEEEE-HHHHHHHHHHHHHHH----------HHHHHHHHHHHHH--------HHHEEEEEEE--------HHHHHHHH----EEEEEHHHHH----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHH-- |
PSI-BLAST Sequence Hits (Top 20 by Identity) ALL DATA
|
TaxID |
Species |
Alignments |
PSI-Blast Data (alignment with lowest E value) |
E value |
Query Span |
Sbjct Span |
Bit Score |
Identity |
HSP Length |
Accession |
Description |
1249659 | Burkholderia pseudomallei MSHR520 | 2 (0.05%) | 1E-169 | 1-420 | 1-420 | 602 | 100 | 420 | ref|YP_108115.1| | transcription termination factor Rho [Burkholderia pseudomal... |
1249662 | Burkholderia thailandensis E444 | 1 (0.03%) | 1E-169 | 1-420 | 1-420 | 602 | 100 | 420 | ref|YP_442738.1| | transcription termination factor Rho [Burkholderia thailande... |
342113 | Burkholderia oklahomensis | 2 (0.05%) | 1E-169 | 1-420 | 1-420 | 601 | 100 | 420 | ref|WP_010103198.1| | transcription termination factor Rho [Burkholderia oklahomen... |
436115 | Burkholderia mallei PRL-20 | 1 (0.03%) | 1E-169 | 1-420 | 1-420 | 600 | 100 | 420 | ref|YP_103024.1| | transcription termination factor Rho [Burkholderia mallei AT... |
441157 | Burkholderia thailandensis MSMB43 | 1 (0.03%) | 1E-162 | 14-420 | 1-407 | 579 | 100 | 407 | ref|WP_006026982.1| | transcription termination factor Rho [Burkholderia thailande... |
1335307 | Burkholderia pseudomallei MSHR305 | 1 (0.03%) | 1E-162 | 14-420 | 1-407 | 578 | 100 | 407 | ref|YP_008340223.1| | transcription termination factor Rho [Burkholderia pseudomal... |
398577 | Burkholderia ambifaria MC40-6 | 2 (0.05%) | 1E-169 | 1-420 | 1-420 | 601 | 99 | 420 | ref|YP_773657.1| | transcription termination factor Rho [Burkholderia ambifaria... |
1055524 | Burkholderia cenocepacia H111 | 1 (0.03%) | 1E-169 | 1-420 | 1-420 | 600 | 99 | 420 | ref|YP_369368.1| | transcription termination factor Rho [Burkholderia lata] ref... |
985079 | Burkholderia multivorans ATCC BAA-247 | 2 (0.05%) | 1E-169 | 1-420 | 1-420 | 600 | 99 | 420 | ref|YP_001579629.1| | transcription termination factor Rho [Burkholderia multivora... |
626418 | Burkholderia glumae BGR1 | 2 (0.05%) | 1E-168 | 1-420 | 1-420 | 598 | 99 | 420 | ref|YP_002911285.1| | transcription termination factor Rho [Burkholderia glumae BG... |
60550 | Burkholderia pyrrocinia | 1 (0.03%) | 1E-161 | 17-420 | 1-404 | 575 | 99 | 404 | ref|WP_017332242.1| | transcription termination factor Rho [Burkholderia pyrrocini... |
667632 | Burkholderia sp. JPY347 | 1 (0.03%) | 1E-160 | 17-420 | 1-404 | 572 | 98 | 404 | ref|WP_020566293.1| | transcription termination factor Rho [Burkholderia sp. JPY34... |
1323664 | Burkholderia caribensis MBA4 | 1 (0.03%) | 1E-160 | 14-420 | 1-407 | 572 | 98 | 407 | gb|ETY76496.1| | Transcription termination factor Rho [Burkholderia caribensi... |
89498 | Burkholderia kururiensis | 1 (0.03%) | 1E-167 | 1-420 | 1-420 | 594 | 97 | 420 | ref|WP_017773748.1| | transcription termination factor Rho [Burkholderia kururiens... |
391038 | Burkholderia phymatum STM815 | 2 (0.05%) | 1E-167 | 1-420 | 1-420 | 594 | 97 | 420 | ref|YP_001857184.1| | transcription termination factor Rho [Burkholderia phymatum ... |
1144309 | Burkholderia sp. BT03 | 1 (0.03%) | 1E-167 | 1-420 | 1-420 | 593 | 97 | 420 | ref|WP_007586495.1| | transcription termination factor Rho [Burkholderia] gb|EIM97... |
1097668 | Burkholderia sp. YI23 | 1 (0.03%) | 1E-169 | 1-420 | 1-420 | 601 | 96 | 420 | ref|YP_004977384.1| | transcription termination factor Rho [Burkholderia sp. YI23]... |
406819 | Burkholderia sp. SJ98 | 1 (0.03%) | 1E-169 | 1-420 | 1-420 | 600 | 96 | 420 | ref|WP_008349328.1| | transcription termination factor Rho [Burkholderia sp. SJ98]... |
640512 | Burkholderia sp. CCGE1003 | 1 (0.03%) | 1E-167 | 1-420 | 1-420 | 594 | 96 | 420 | ref|YP_003906798.1| | transcription termination factor Rho [Burkholderia sp. CCGE1... |
1229205 | Burkholderia phenoliruptrix BR3459a | 1 (0.03%) | 1E-167 | 1-420 | 1-420 | 594 | 96 | 420 | ref|YP_558659.1| | transcription termination factor Rho [Burkholderia xenovoran... |