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Features and Secondary Structure
	1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330 . 340 . 350 . 360 . 370 . 380 . 390 . 400
	MLRIGLTGGIGAGKSALSSAFAQCGAVIVDGDVIAREVVRPGTEGLAALVEAFGRDILLADGSLDRPALAAKAFADDAARQTLNGIVHPLVGARRAEIIASVPADSVVVEDIPLLVESGMAPLFPLVVIVYADVEVRLRRLVEQRGMAEADARARIAAQASDEQRRAVADIWLDNSGSPAELVQRAQQVWNERIVPFAHNLSTRQIARAPVRLVPPDPEWPAQAQRIVNRLKTASGHRALRVDHVGSTALPGDPDFAAKDVIDIQITVESLAAADELVEPLLAAGYPRLEHITADVAKPDARSTVERYDHTDDPALWHKRIHASADPGRPTNVHIRVDGWPGQQFALLFVDWLTADPDARADYLAVKRSAEQQADGDIDAYVAVKEPWFRDAYRRAWDWADSTGWKP
tmhmm (0)	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (9%)	-------------------------------------------------------------------XXXXXXXXXXXX------------------------------------------------------XXXXXXXXXX----XXXXXXXXXXXXXXXX----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
coiled-coils (0%)	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (5%)	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXX---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XX
psipred	-EEEEEE------HHHHHHHHHH---EEEE--HHHHHHHHH--HHHHHHHHHH------------HHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH----EEEEEE-EE----------EEEEEEE-HHHHHHHHHHH----HHHHHHHHHH---HHHHH---EEEEE-----HHHHHHHHHHHHH-------------------------HHHHHHHHHHHHHHHHH------EEEEE----------------EEEEEEE--HHHHHHHHHHHHH---EE------------------------------EEEE-------EEEEEEEEE--HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHH----
sam	--EEEE----HH-HHHHHHHHHHH---EE-HHHHHHHHH----HHHHHHHHHHHHHHH-------HHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHH-----EEEEE--HHHHH-------EEEEEE--HHHHHHHHHHHH---HHHHHHHHHH---HHHHHHHHHEEE-----HHHHHHHHHHHHHHHH-HHHHHHH---------EEE------HHHHHHHHHHHHHHH---EEEEEEEE----------------EEEEEE--HHHHHHHHHHHHHH------------------------------HHHHHHH--------EEEEEEEE----HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHH---HHHHHHHH-HHHHHHHHHHHHHHHHH----
jufo	-EEEEEE------HHHHHHHHHHH-EEEEEHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHH--HHHHHHHH---HHHHHHHHHHHHH------EEEEE--------------EEEEEEE-HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHEEE-----HHHHHHHHHHHHHHH----------------------------HHHHHHHHHHHHH-----EEEEEEE----------------EEEEEEE---HHHHHHHHHHHH-EEE------------------------------EEEE-------EEEEEEEEE---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH------

# SignalP-4.0 gram+ predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    23	    0.208
  max. Y    23	    0.259
  max. S    17	    0.432
  mean S     1-22   0.315
       D     1-22   0.281    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.281 D-cutoff=0.450 Networks=SignalP-TM

Domain Repeats Prediction
Boundary	STD (+/-)	Consensus
--	--	--

Ginzu Domain Prediction 1
Domain	Span	Source	Reference Parent	Parent Span	Confidence	Annotations
	1-207	alignment	1vhlA_303	1-208	0.843300	Transferase
	208-407	alignment	2nrkA_101	1-165	0.798300	STRUCTURAL GENOMICS, UNKNOWN FUNCTION

PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA
TaxID	Species	Alignments	PSI-Blast Data (alignment with lowest E value)
			E value	Query Span	Sbjct Span	Bit Score	Identity	HSP Length	Accession	Description
1764	Mycobacterium avium	5 (0.14%)	1E-137	1-407	3-409	494	100	407	ref|WP_023867646.1|	dephospho-CoA kinase, partial [Mycobacterium avium] gb|ETB00...
1199187	Mycobacterium avium subsp. paratuberculosis MAP4	1 (0.03%)	1E-136	1-407	1-407	493	100	407	ref|NP_960260.1|	fused dephospho-CoA kinase/unknown domain-containing protein...
1299330	Mycobacterium avium 2285 (R)	1 (0.03%)	1E-136	1-407	1-407	492	100	407	ref|YP_882335.1|	dephospho-CoA kinase/protein folding accessory domain-contai...
0	UNIDENTIFIED	83 (2.4%)	1E-136	1-407	1-407	492	100	407	gb|ETB52269.1|	dephospho-CoA kinase [Mycobacterium avium 10-5560]
1335419	Mycobacterium avium MAV_120709_2344	1 (0.03%)	1E-136	1-407	1-407	491	100	407	ref|WP_023869395.1|	dephospho-CoA kinase [Mycobacterium avium] gb|ETA96848.1| de...
1335420	Mycobacterium avium MAV_120809_2495	1 (0.03%)	1E-137	1-407	1-407	494	99	407	gb|ETZ35260.1|	dephospho-CoA kinase [Mycobacterium avium MAV_120809_2495]
1335322	Mycobacterium sp. MAC_080597_8934	1 (0.03%)	1E-136	1-407	1-407	491	99	407	gb|ETZ64142.1|	dephospho-CoA kinase [Mycobacterium sp. MAC_011194_8550] gb|...
1335421	Mycobacterium intracellulare MIN_052511_1280	1 (0.03%)	1E-134	1-407	1-404	483	86	407	gb|ETZ29438.1|	dephospho-CoA kinase [Mycobacterium intracellulare MIN_05251...
487521	Mycobacterium intracellulare ATCC 13950	1 (0.03%)	1E-133	1-407	1-404	482	86	407	ref|YP_005338524.1|	dephospho-CoA kinase domain fusion protein [Mycobacterium in...
1138382	Mycobacterium intracellulare MOTT-02	1 (0.03%)	1E-134	1-407	1-404	484	85	407	ref|YP_005343677.1|	dephospho-CoA kinase domain fusion protein [Mycobacterium in...
1299331	Mycobacterium intracellulare 1956	1 (0.03%)	1E-134	1-407	1-404	484	85	407	gb|EUA32422.1|	dephospho-CoA kinase [Mycobacterium avium 2285 (S)] gb|EUA54...
1335422	Mycobacterium intracellulare MIN_061107_1834	1 (0.03%)	1E-134	1-407	1-404	484	85	407	ref|YP_005348892.1|	dephospho-CoA kinase domain fusion protein [Mycobacterium in...
1138871	Mycobacterium yongonense 05-1390	1 (0.03%)	1E-133	1-407	1-404	480	85	407	ref|YP_008188780.1|	dephospho-CoA kinase domain fusion protein [Mycobacterium yo...
1041522	Mycobacterium colombiense CECT 3035	1 (0.03%)	1E-132	1-407	1-404	479	85	407	ref|WP_007776134.1|	dephospho-CoA kinase [Mycobacterium colombiense] gb|EJO86841...
1232724	Mycobacterium indicus pranii MTCC 9506	1 (0.03%)	1E-132	1-407	1-404	477	82	407	ref|YP_006730098.1|	dephospho-CoA kinase [Mycobacterium indicus pranii MTCC 9506...
525368	Mycobacterium parascrofulaceum ATCC BAA-614	1 (0.03%)	1E-127	1-407	1-404	461	79	407	ref|WP_007169712.1|	dephospho-CoA kinase [Mycobacterium parascrofulaceum] gb|EFG...
1205674	Mycobacterium canettii CIPT 140070010	1 (0.03%)	1E-129	1-407	1-407	470	78	407	ref|YP_007264353.1|	Putative dephospho-CoA kinase coaE (dephosphocoenzyme A kina...
1205676	Mycobacterium canettii CIPT 140060008	1 (0.03%)	1E-129	1-407	1-407	468	78	407	ref|YP_004745088.1|	putative dephospho-CoA kinase COAE [Mycobacterium canettii C...
1205675	Mycobacterium canettii CIPT 140070008	1 (0.03%)	1E-129	1-407	1-407	467	78	407	ref|YP_007287528.1|	Putative dephospho-CoA kinase coaE (dephosphocoenzyme A kina...
33894	Mycobacterium africanum	1 (0.03%)	1E-128	1-407	1-407	466	77	407	ref|WP_003910405.1|	dephospho-CoA kinase [Mycobacterium africanum] gb|EFD43307.1...