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Job 82011 [SSGCID - ChtrB.00944.a] [2018-03-09] [D-172-16-30-137.dhcp4.x.x] [Structure] [Complete] Ribose-5-phosphate isomerase A (EC 5.3.1.6) (Phosphoriboisomerase A) (PRI) - BATCH:82003

Full Structure Predictions  
Model 1

 chemical/x-pdb  MIME type  PDB file
Model 2

 chemical/x-pdb  MIME type  PDB file
Model 3

 chemical/x-pdb  MIME type  PDB file
Model 4

 chemical/x-pdb  MIME type  PDB file
Model 5

 chemical/x-pdb  MIME type  PDB file

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Features and Secondary Structure  
 
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MSKQPENSFSSDKFFPIKQKLALEAVALVEPGMCVGLGSGSTAREFILALGDRVRTERLVITAVASSRISQLLAEAVGIPLSDHSLLQDVDLVVDGADEVDPCLRMIKGGGGALFREKILLQSGKRNVILVDERKLVPTLGKFSLPIEIAPFGCSSVQRILNKQGYFGEWRETSAGERFITDNGNYIYDVRTPDSYANPEEDMIRLLQIRGIIDVGFVIAKAEVWVGYADGSIVRKKEHNEY
tmhmm (0)
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low complexity (0%)
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coiled-coils (0%)
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disordered (11%)
XXXXXXXXXXXXXXXX-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXX
psipred
------------HHHHHHHHHHHHHHHH-----EEEE---HHHHHHHHHHHHHHHH---EEEEE---HHHHHHHHH-------HHH-----EEEE--HHH-----EEE------HHHHHHHHH--EEEEEE----EEEE-------EEE-HHHHHHHHHHHHHH---EEE-------EEEE----EEEEE--------HHHHHHHHH----EEEE-------EEEEEE---EEEEE------

# SignalP-4.0 gram+ predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    44	    0.155
  max. Y    33	    0.149
  max. S    24	    0.274
  mean S     1-32   0.179
       D     1-32   0.161    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.161 D-cutoff=0.450 Networks=SignalP-TM


Domain Repeats Prediction     Top
  Boundary     STD (+/-)     Consensus  
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Ginzu Domain Prediction 1       Top
Domain Span Source Reference Parent   Parent Span     Confidence     Annotations  
  1-242     alignment     4x84B_204     1-229   0.9311   --


PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA       Top
TaxID Species Alignments PSI-Blast Data (alignment with lowest E value)
E value Query Span Sbjct Span Bit Score Identity HSP Length Accession Description
813Chlamydia trachomatis2 (0.08%)2E-761-2421-242291100242ref|YP_001654541.1|ribose-5-phosphate isomerase A [Chlamydia trachomatis 434/Bu...
580047Chlamydia trachomatis A24971 (0.04%)1E-771-24216-25729599242ref|YP_005813040.1|Ribose 5-phosphate isomerase [Chlamydia trachomatis A2497] r...
907269Chlamydia trachomatis RC-F(s)/3421 (0.04%)8E-771-2421-24229399242ref|YP_008345146.1|ribose-5-phosphate isomerase A [Chlamydia trachomatis RC-F(s...
1071753Chlamydia trachomatis A/3631 (0.04%)1E-761-2421-24229299242ref|YP_328021.1|ribose-5-phosphate isomerase A [Chlamydia trachomatis A/HAR-...
1112249Chlamydia psittaci C6/981 (0.04%)2E-689-2371-22926559229ref|YP_004422466.1|ribose 5-phosphate isomerase A [Chlamydia psittaci 6BC] ref|...
406984Chlamydophila pneumoniae LPCoLN1 (0.04%)2E-629-2361-22824455228ref|YP_005662196.1|ribose 5-phosphate isomerase A [Chlamydophila pneumoniae LPC...
324057Paenibacillus sp. JDR-21 (0.04%)3E-8415-2331-21831748220ref|YP_003011421.1|ribose 5-phosphate isomerase [Paenibacillus sp. JDR-2] ref|W...
765953Waddlia chondrophila 2032/991 (0.04%)1E-6627-23621-23025946211ref|YP_003709695.1|Ribose 5-phosphate isomerase [Waddlia chondrophila WSU 86-10...
349520Paenibacillus polymyxa E6811 (0.04%)2E-8115-2381-22230845225ref|YP_003870185.1|ribose-5-phosphate isomerase A (phosphoriboisomerase A) (PRI...
1034769Paenibacillus sp. HW5671 (0.04%)5E-8118-2416-22730645225ref|WP_019911386.1|hypothetical protein [Paenibacillus sp. HW567]
1227350Paenibacillus sp. FSL H8-2371 (0.04%)3E-8018-2356-22130445219gb|ETT49479.1|ribose-5-phosphate isomerase A [Paenibacillus sp. FSL H8-237...
1227352Paenibacillus sp. FSL R7-2771 (0.04%)3E-7918-2356-22130145219gb|ETT63344.1|ribose-5-phosphate isomerase A [Paenibacillus sp. FSL R7-277...
1308Streptococcus thermophilus1 (0.04%)6E-2771-1611-911274591emb|CAC21178.1|putative ribose-5P-isomerase [Streptococcus thermophilus]
1050222Paenibacillus sp. Aloe-111 (0.04%)6E-8215-2383-22431044225ref|WP_007429937.1|ribose 5-phosphate isomerase [Paenibacillus sp. Aloe-11] gb|...
985665Paenibacillus terrae HPL-0031 (0.04%)2E-8115-2381-22230844225ref|YP_005076475.1|ribose-5-phosphate isomerase a [Paenibacillus terrae HPL-003...
1052684Paenibacillus polymyxa M11 (0.04%)3E-8115-2381-22230744225ref|YP_003946223.1|ribose-5-phosphate isomerase a [Paenibacillus polymyxa SC2] ...
59893Paenibacillus peoriae1 (0.04%)3E-8115-2381-22230744225ref|WP_010345083.1|ribose 5-phosphate isomerase [Paenibacillus peoriae]
1406Paenibacillus polymyxa1 (0.04%)9E-8115-2381-22230644225ref|YP_008911434.1|ribose 5-phosphate isomerase [Paenibacillus polymyxa CR1] re...
44249Paenibacillus1 (0.04%)1E-8015-2381-22230544225ref|WP_016819237.1|ribose 5-phosphate isomerase [Paenibacillus] gb|AHM65536.1| ...
369333Paenibacillus terrigena1 (0.04%)2E-7718-2366-22229544220ref|WP_018759238.1|hypothetical protein [Paenibacillus terrigena]






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