Features and Secondary Structure |
| 1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330 . 340 . 350 . |
| MEIKVLECLKRLEEVEKQISDPNIFSNPKEYSSLSKEHARLSEIKNAHESLVATKKILQDDKLALSTEKDPEIVAMLEEGVLVGEEAVERLSKQLENLLIPPDPDDDLSVIMELRAGTGGDEAALFVGDCVRMYHLYAASKGWQCEVLSTSESDLGGYKEYVMGISGASVKRFLQYEAGTHRVQRVPETETQGRVHTSAVTVAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNVTDSAVRITHIPSGVVVTCQDERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRSAQVGSGDRSERIRTYNFPQNRVTDHRIGLTLYNLDRVMEGELDMITTALVTHVHRQLFGHEETA |
tmhmm (0) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
low complexity (6%) | -------------------------------------------------------------------------XXXXXXXXXXXXXXXX-----------XXXXXXX------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
coiled-coils (6%) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXX-------------------------------------------------------------------- |
disordered (11%) | X------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXX-X---------XXXXXXXXXXXXXXXXXXXXXXXXX------------------------------------------------X--XXXXX |
psipred | --HHHHHHHHHHHHHHHHH----HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------EEEEEE-----HHHHHHHHHHHHHHHHHHHH----EEEEE----------EEEEEE----HHHHHHHH--EEEEE------------EEEEEEEEEEE--------------EEEEEE--------------EEEEEEE-----EEEEE----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------EEEEEEE---EEEEEE---EE--HHHHH---HHHHHHHHHHHHHHHHHHHH--- |
PSI-BLAST Sequence Hits (Top 20 by Identity) ALL DATA
|
TaxID |
Species |
Alignments |
PSI-Blast Data (alignment with lowest E value) |
E value |
Query Span |
Sbjct Span |
Bit Score |
Identity |
HSP Length |
Accession |
Description |
813 | Chlamydia trachomatis | 3 (0.08%) | 1E-121 | 1-359 | 1-359 | 442 | 100 | 359 | ref|YP_001654362.1| | peptide chain release factor 1 [Chlamydia trachomatis 434/Bu... |
580049 | Chlamydia trachomatis B/Jali20/OT | 1 (0.03%) | 1E-121 | 1-359 | 1-359 | 441 | 100 | 359 | ref|YP_002887651.1| | peptide chain release factor 1 [Chlamydia trachomatis B/Jali... |
1100833 | Chlamydia trachomatis F/SWFPminus | 1 (0.03%) | 1E-121 | 1-359 | 1-359 | 441 | 99 | 359 | ref|YP_005809223.1| | peptide chain release factor 1 [Chlamydia trachomatis E/1102... |
1112260 | Chlamydia psittaci 02DC24 | 1 (0.03%) | 1E-119 | 1-355 | 1-355 | 436 | 81 | 355 | ref|YP_004422488.1| | peptide chain release factor 1 [Chlamydia psittaci 6BC] ref|... |
1234369 | Chlamydia pecorum P787 | 1 (0.03%) | 1E-117 | 1-359 | 1-360 | 429 | 77 | 361 | ref|YP_004377655.1| | peptide chain release factor 1 [Chlamydophila pecorum E58] r... |
765952 | Parachlamydia acanthamoebae UV-7 | 1 (0.03%) | 1E-116 | 1-354 | 1-353 | 424 | 63 | 354 | ref|YP_004652686.1| | peptide chain release factor 1 [Parachlamydia acanthamoebae ... |
765953 | Waddlia chondrophila 2032/99 | 1 (0.03%) | 1E-114 | 1-351 | 1-350 | 418 | 59 | 351 | ref|YP_003709068.1| | Peptide chain release factor 1 [Waddlia chondrophila WSU 86-... |
470 | Acinetobacter baumannii | 2 (0.05%) | 1E-106 | 67-357 | 2-291 | 391 | 55 | 291 | ref|YP_001085183.1| | peptide chain release factor 1 [Acinetobacter baumannii ATCC... |
45351 | Nematostella vectensis | 4 (0.11%) | 1E-89 | 95-356 | 1-262 | 336 | 54 | 264 | ref|XP_001634780.1| | predicted protein [Nematostella vectensis] gb|EDO42717.1| pr... |
281689 | Desulfuromonas acetoxidans DSM 684 | 1 (0.03%) | 1E-132 | 1-359 | 3-358 | 478 | 53 | 359 | ref|WP_005998558.1| | peptide chain release factor 1 [Desulfuromonas acetoxidans] ... |
555088 | Dethiobacter alkaliphilus AHT 1 | 2 (0.05%) | 1E-128 | 1-358 | 1-356 | 464 | 53 | 358 | ref|WP_008516604.1| | peptide chain release factor 1 [Dethiobacter alkaliphilus] g... |
749219 | Moraxella catarrhalis RH4 | 1 (0.03%) | 1E-126 | 1-354 | 5-354 | 456 | 53 | 354 | ref|YP_003626948.1| | peptide chain release factor 1 [Moraxella catarrhalis RH4] r... |
857575 | Moraxella catarrhalis BC7 | 1 (0.03%) | 1E-125 | 1-354 | 5-354 | 455 | 53 | 354 | ref|WP_003669771.1| | peptide chain release factor 1 [Moraxella catarrhalis] gb|EG... |
1199191 | Legionella pneumophila subsp. pneumophila str. Thunder Bay | 1 (0.03%) | 1E-125 | 1-356 | 5-358 | 454 | 53 | 356 | ref|YP_096345.1| | peptide chain release factor 1 [Legionella pneumophila subsp... |
555778 | Halothiobacillus neapolitanus c2 | 2 (0.05%) | 1E-125 | 1-346 | 6-349 | 454 | 53 | 346 | ref|YP_003262927.1| | peptide chain release factor 1 [Halothiobacillus neapolitanu... |
869211 | Spirochaeta thermophila DSM 6578 | 1 (0.03%) | 1E-125 | 2-353 | 4-353 | 454 | 53 | 352 | ref|YP_006045949.1| | Peptide chain release factor 1 [Spirochaeta thermophila DSM ... |
423212 | Legionella pneumophila 2300/99 Alcoy | 2 (0.05%) | 1E-125 | 1-356 | 5-358 | 453 | 53 | 356 | ref|YP_001251083.1| | peptide chain release factor 1 [Legionella pneumophila str. ... |
665571 | Spirochaeta thermophila DSM 6192 | 1 (0.03%) | 1E-124 | 2-353 | 4-353 | 452 | 53 | 352 | ref|YP_003875136.1| | peptide chain release factor 1 [Spirochaeta thermophila DSM ... |
525146 | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 | 2 (0.05%) | 1E-124 | 1-358 | 1-355 | 452 | 53 | 358 | ref|YP_002480872.1| | peptide chain release factor 1 [Desulfovibrio desulfuricans ... |
665942 | Desulfovibrio sp. 6_1_46AFAA | 1 (0.03%) | 1E-123 | 1-358 | 1-355 | 448 | 53 | 358 | ref|WP_008683134.1| | peptide chain release factor 1 [Desulfovibrio] gb|EFL87089.1... |