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Job 83552 [CrneC.19313.a] [2018-05-24] [64.146.x.x] [Structure] [Complete]

Full Structure Predictions  
Model 1

 chemical/x-pdb  MIME type  PDB file
Model 2

 chemical/x-pdb  MIME type  PDB file
Model 3

 chemical/x-pdb  MIME type  PDB file
Model 4

 chemical/x-pdb  MIME type  PDB file
Model 5

 chemical/x-pdb  MIME type  PDB file

Click the icons below each image to download the prediction in PDB format ( PDB file )

Images were produced using MolScript and Raster3D!



Features and Secondary Structure  
 
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MASKQHAHILSLARSMIPPLHPKLHKGQAGRIGVLGGSGDYSGAPYFSSMGAMRFGADLAHVICEPSAGAVIKTYSPDLIVHTILDPQKSREDIRSALKGVMSRLHVLIIGPGLGRDDHMQSCAKIAFELAKDMEQMGVVVDADGLWLVQNEPKVVMDWPGVPRIILTPNVMEFKRLCDTMKINASGPHTSLCPQLATALGNATIIQKGPSDIISNGLKIPFALLSDESEEEQNYLEVKVEGGLKRVGGQGDILSGSTGVLLAWGSEWVRGTYEHVGHPPPQDKAIKENIPVLAAYGASTFNRTVSKRGFQKKGRSMVTGDLVDMVGEVYEEVFGNPGEVEGRGKL
tmhmm (0)
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (0%)
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
coiled-coils (0%)
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (9%)
XXXXXX-XXXX--------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXX-----------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXX
psipred
----HHHHHHHHHHHH--------------EEEEEE-------HHHHHHHHHHH----EEEEEE-HHHHHHHHH----EEEE-------HHHHHHHHHHHHHH---EEEEE------HHHHHHHHHHHHHHHH------EE--HHHHHHHHHHHHHH-------EEE---HHHHHHH----------HHHHHHHHHHHHH---EEEE----EEEE----EEE-----------EEEE-----HHH-----HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHH------------

# SignalP-4.0 gram+ predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    28	    0.114
  max. Y    12	    0.212
  max. S     4	    0.534
  mean S     1-11   0.449
       D     1-11   0.305    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.305 D-cutoff=0.450 Networks=SignalP-TM


Domain Repeats Prediction     Top
  Boundary     STD (+/-)     Consensus  
------


Ginzu Domain Prediction 1       Top
Domain Span Source Reference Parent   Parent Span     Confidence     Annotations  
  1-346     alignment     3nl2A_308     1-505   0.7223   TRANSFERASE


PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA       Top
TaxID Species Alignments PSI-Blast Data (alignment with lowest E value)
E value Query Span Sbjct Span Bit Score Identity HSP Length Accession Description
235443Cryptococcus neoformans var. grubii H991 (0.03%)1E-1011-3461-346374100346gb|AFR94362.1|YjeF family protein [Cryptococcus neoformans var. grubii H99...
214684Cryptococcus neoformans var. neoformans JEC213 (0.08%)2E-951-3461-36335594364ref|XP_568064.1|cytoplasm protein [Cryptococcus neoformans var. neoformans J...
367775Cryptococcus gattii WM2761 (0.03%)4E-981-3461-35336493353ref|XP_003193337.1|cytoplasm protein [Cryptococcus gattii WM276] gb|ADV21550.1|...
578456Tremella mesenterica DSM 15581 (0.03%)2E-901-3461-34533973346ref|XP_007003249.1|hypothetical protein TREMEDRAFT_29037 [Tremella mesenterica ...
1220162Trichosporon asahii var. asahii CBS 89041 (0.03%)1E-7910-33514-33030359326gb|EJT45197.1|cytoplasm protein [Trichosporon asahii var. asahii CBS 2479]...
425265Malassezia globosa CBS 79661 (0.03%)5E-409-1781-16617153170ref|XP_001731570.1|hypothetical protein MGL_0838 [Malassezia globosa CBS 7966] ...
1086054Rhizoctonia solani AG-3 Rhs1AP1 (0.03%)4E-821-3449-32831150344gb|EUC54848.1|ATP-dependent (S)-NAD(P)H-hydrate dehydratase [Rhizoctonia s...
1130832Rhodosporidium toruloides NP111 (0.03%)4E-774-3382-31329550336gb|EMS18730.1|carbohydrate kinase-related domain protein [Rhodosporidium t...
745407Dacryopinax sp. DJM-731 SS11 (0.03%)1E-772-3361-31229649336gb|EJU03686.1|Ribokinase-like protein [Dacryopinax sp. DJM-731 SS1]
671144Wallemia sebi CBS 633.661 (0.03%)7E-746-3341-30628349330ref|XP_006957787.1|Ribokinase-like protein [Wallemia sebi CBS 633.66] gb|EIM219...
983506Rhizoctonia solani AG-1 IA1 (0.03%)3E-641-3269-30725249326gb|ELU36682.1|YjeF domain-containing protein [Rhizoctonia solani AG-1 IA]
764103Mixia osmundae IAM 143241 (0.03%)8E-821-3351-30931048335dbj|GAA99273.1|hypothetical protein E5Q_05968 [Mixia osmundae IAM 14324]
694068Fomitiporia mediterranea MF3/221 (0.03%)6E-779-3467-32629448338ref|XP_007269744.1|Ribokinase-like protein [Fomitiporia mediterranea MF3/22] gb...
741275Punctularia strigosozonata HHB-11173 SS51 (0.03%)2E-752-3464-33728947349gb|EIN03827.1|YjeF domain-containing protein [Punctularia strigosozonata H...
732165Dichomitus squalens LYAD-421 SS11 (0.03%)5E-837-343241-57131446342gb|EJF57227.1|hypothetical protein DICSQDRAFT_163516 [Dichomitus squalens ...
561896Postia placenta Mad-698-R2 (0.05%)6E-807-3445-32730446338ref|XP_002469228.1|predicted protein [Postia placenta Mad-698-R] gb|EED85530.1|...
936046Agaricus bisporus var. bisporus H971 (0.03%)4E-627-2745-27624546276ref|XP_006461843.1|hypothetical protein AGABI2DRAFT_143608 [Agaricus bisporus v...
578457Serpula lacrymans var. lacrymans S7.91 (0.03%)2E-5310-2538-25621646253gb|EGO22446.1|hypothetical protein SERLADRAFT_473270 [Serpula lacrymans va...
743788Fomitopsis pinicola FP-58527 SS11 (0.03%)7E-807-3465-33230445343gb|EPT03036.1|hypothetical protein FOMPIDRAFT_1143035 [Fomitopsis pinicola...
717944Trametes versicolor FP-101664 SS11 (0.03%)9E-797-3445-33730045344gb|EIW58577.1|Ribokinase-like protein [Trametes versicolor FP-101664 SS1]






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