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Features and Secondary Structure
	1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330 . 340 . 350 . 360 . 370 . 380 . 390 . 400 . 410 . 420 . 430 . 440 . 450 . 460 . 470 . 480 . 490 . 500 . 510 . 520 . 530 . 540 . 550 . 560 . 570 . 580 . 590 . 600 . 610 . 620 . 630 . 640
	MAKVIGIDLGTTNSCLAISENGQTKVIENAEGARTTPSIIAYLDGGEILVGAPAKRQAVTNAKNTIYAAKRLIGHKFEDKEVQRDIESMPFEIIKADNGDAWVKAQGKELSPPQISAEVLRKMKEAAEAYLGEKVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAFGMDKGDNKDRKIAVYDLGGGTFDISIIEIANLDGDKQFEVLATNGDTFLGGEDFDQRLIDYIIDEFKKEQGIDLKQDVMALQRLKEAAEKAKIELSSGQQTEINLPYITMDATGPKHLAMKITRAKFESLVEDLIARSIEPCRTALKDAGLSTGDIDDVILVGGQSRMPKVQEAVKDFFGKEPRKDVNPDEAVAVGAAIQGEVLSGGRSDVLLLDVTPLSLGIETMGGVMTKLIQKNTTIPTKASQVFSTAEDNQSAVTIHVLQGERERASANKSLGQFNLGDIAPAPRGMPQIEVTFDIDANGILHVSAKDKGTGKAANITIQGSSGLSEEEIERMVKDAEANAEEDKKLTELVASRNQAEALIHSVKKSLADYGDKLDAAEKEKIEAALKEAEEAVKGDDKTAIDAKAEALGTASQKLGEMVYAQAQAEAQAGEGAQANASAKKDDDVVDADFEEVKDDKK
tmhmm (0)	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (9%)	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXX----------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
coiled-coils (14%)	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXX-------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------------------------
disordered (13%)	X-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXX---------------------------------X-XX--XXXXXXXXXXX--X---------------------------------------XXXXXXXXXXXXXX--------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---X--XXXXX
psipred	---EEEE----HHEEEEEEE--EEEE------------EEEE-----EE--HHHHHHHHH-------HHHHH-------HHHHHHHH---EEEEE-----EEEEE---EE-HHHHHHHHHHHHHHHHHHH-------EEEE------HHHHHHHHHHHHH----EEEEE-HHHHHHHHH----------EEEEEE-----EEEEEEEEE------EEEEEE-----------HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHH-----EEEEEE----------EEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH----HHH--EEEEE------HHHHHHHHHHH---------HHHHHHHHHHHHHHHH------EEEEE------EEEE---EEEEEE-----------EEEEE-----EEEEEEEEE----------EE-EEEE------------EEEEEEE-----EEEEEEE-------EEEEE------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHH-------------------------EEEE------

# SignalP-4.0 gram+ predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    30	    0.150
  max. Y    30	    0.192
  max. S    16	    0.535
  mean S     1-29   0.250
       D     1-29   0.215    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.215 D-cutoff=0.450 Networks=SignalP-TM

Domain Repeats Prediction
Boundary	STD (+/-)	Consensus
--	--	--

Ginzu Domain Prediction 1
Domain	Span	Source	Reference Parent	Parent Span	Confidence	Annotations
	1-642	alignment	3d2eA_309	1-629	0.8914	CHAPERONE

PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA
TaxID	Species	Alignments	PSI-Blast Data (alignment with lowest E value)
			E value	Query Span	Sbjct Span	Bit Score	Identity	HSP Length	Accession	Description
528351	Neisseria gonorrhoeae F62	1 (0.03%)	0.0	1-642	1-642	771	100	642	ref|YP_208484.1|	molecular chaperone DnaK [Neisseria gonorrhoeae FA 1090] ref...
528358	Neisseria gonorrhoeae PID332	1 (0.03%)	0.0	1-642	1-642	770	100	642	ref|WP_003700270.1|	molecular chaperone DnaK [Neisseria gonorrhoeae] gb|EEZ55348...
940296	Neisseria gonorrhoeae TCDC-NG08107	1 (0.03%)	0.0	1-642	1-642	769	100	642	ref|YP_005890160.1|	molecular chaperone DnaK [Neisseria gonorrhoeae TCDC-NG08107...
521006	Neisseria gonorrhoeae NCCP11945	1 (0.03%)	0.0	16-642	1-627	732	100	627	ref|YP_002002314.1|	molecular chaperone DnaK [Neisseria gonorrhoeae NCCP11945] r...
1095699	Neisseria meningitidis 98080	1 (0.03%)	0.0	1-642	1-642	769	99	642	ref|WP_002244876.1|	chaperone protein DnaK [Neisseria meningitidis] gb|ELK61570....
1145177	Neisseria meningitidis NM134	1 (0.03%)	0.0	1-642	1-642	769	99	642	ref|WP_002239840.1|	molecular chaperone DnaK [Neisseria meningitidis] gb|EJU7110...
1145176	Neisseria meningitidis 2007461	1 (0.03%)	0.0	1-642	1-642	769	99	642	ref|YP_005879128.1|	chaperone protein DnaK (heat shock protein 70; heat shock 70...
1145190	Neisseria meningitidis NM3164	1 (0.03%)	0.0	1-642	1-642	768	99	642	ref|WP_002260521.1|	chaperone protein DnaK [Neisseria meningitidis] gb|EOC66556....
1145134	Neisseria meningitidis 97027	1 (0.03%)	0.0	1-642	1-642	767	99	642	ref|YP_002342189.1|	molecular chaperone DnaK [Neisseria meningitidis Z2491] ref|...
1145131	Neisseria meningitidis 70082	1 (0.03%)	0.0	1-642	1-642	767	99	642	ref|WP_002236759.1|	molecular chaperone DnaK [Neisseria meningitidis] gb|EJU6566...
1069616	Neisseria meningitidis 98008	1 (0.03%)	0.0	1-642	1-642	767	99	642	ref|WP_002237746.1|	molecular chaperone DnaK [Neisseria meningitidis] gb|EJU6834...
1145144	Neisseria meningitidis NM607	1 (0.03%)	0.0	1-642	1-642	766	99	642	ref|YP_005891391.1|	chaperone protein DnaK (heat shock protein 70; heat shock 70...
1069608	Neisseria meningitidis 93003	1 (0.03%)	0.0	1-642	1-642	766	99	642	ref|WP_002231921.1|	molecular chaperone DnaK [Neisseria meningitidis] gb|EJU5418...
1069622	Neisseria meningitidis NM3001	1 (0.03%)	0.0	1-642	1-642	766	99	642	ref|YP_001598654.1|	molecular chaperone DnaK [Neisseria meningitidis 053442] ref...
1190578	Neisseria meningitidis NM518	1 (0.03%)	0.0	1-642	1-642	766	99	642	ref|WP_021439295.1|	chaperone protein DnaK [Neisseria meningitidis] gb|EQD16616....
1190573	Neisseria meningitidis NM045	1 (0.03%)	0.0	1-642	1-642	766	99	642	ref|WP_021438324.1|	chaperone protein DnaK [Neisseria meningitidis] gb|EQD05099....
1190581	Neisseria meningitidis NM2866	1 (0.03%)	0.0	1-642	1-642	766	99	642	ref|YP_005882189.1|	chaperone protein DnaK [Neisseria meningitidis alpha710] ref...
295996	Neisseria meningitidis alpha275	1 (0.03%)	0.0	1-642	1-642	765	99	642	emb|CBA08739.1|	Molecular chaperone [Neisseria meningitidis alpha275]
1069621	Neisseria meningitidis NM3081	1 (0.03%)	0.0	1-641	1-641	765	99	641	ref|WP_002242386.1|	molecular chaperone DnaK [Neisseria meningitidis] gb|EJU8076...
1069620	Neisseria meningitidis NM2795	1 (0.03%)	0.0	1-642	1-642	765	99	642	ref|WP_002241204.1|	molecular chaperone DnaK [Neisseria meningitidis] emb|CCI721...