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Features and Secondary Structure
	1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310
	MSQHRKLIILGSGPAGYTAAVYAARANLNPVIITGIAQGGQLMTTTEVDNWPADADGVQGPELMARFLAHAERFGTEIIFDQINAVDLQKRPFALKGDMGEYTCDALIVATGASAKYLGLPSEEAFAGKGVSACATCDGFFYKNQDVAVVGGGNTAVEEALYLANIAKTVTLIHRRSEFRAEKIMIDKLMKRVEEGKIILKLESNLQEVLGDDRGVNGALLKNNDGSDQQIAVSGIFIAIGHKPNTDIFKGQLEMDEAGYLKTKGGTADNVGATNIEGVWAAGDVKDHTYRQAITSAASGCQAALDAERWLGSQNI
tmhmm (0)	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (4%)	--------------XXXXXXXXXXXX--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
coiled-coils (0%)	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (2%)	XXX-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XX
psipred	------EEEE---HHHHHHHHHHHH----EEEE--------------------------HHHHHHHHHHHHHH---EEEEEEEEEEEE----EEEEE---EEEEEEEEE------------HHHHH----EEEEEE--HHH----EEEEEE---HHHHHHHHHHHH--EEEEE---------HHHHHHHHHHH----EEEEEEEEEEEEE----EEEEEEEE-----EEEEE--EEEEE-------HHHHHHHHH-----EEE---------------EEEEEE-------HHHHHHHHHHHHHHHHHHHHHH---

# SignalP-4.0 gram- predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    24	    0.244
  max. Y    24	    0.327
  max. S    17	    0.639
  mean S     1-23   0.418
       D     1-23   0.369    0.570  NO
Name=tmp_signalp_seq	SP='NO' D=0.369 D-cutoff=0.570 Networks=SignalP-noTM

Domain Repeats Prediction
Boundary	STD (+/-)	Consensus
--	--	--

Ginzu Domain Prediction 1
Domain	Span	Source	Reference Parent	Parent Span	Confidence	Annotations
	1-316	alignment	1f6mA_305	1-320	0.9868	OXIDOREDUCTASE

PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA
TaxID	Species	Alignments	PSI-Blast Data (alignment with lowest E value)
			E value	Query Span	Sbjct Span	Bit Score	Identity	HSP Length	Accession	Description
489653	Neisseria lactamica 020-06	1 (0.03%)	1E-102	1-316	1-316	379	100	316	ref|YP_004048745.1|	thioredoxin reductase [Neisseria lactamica 020-06] ref|WP_00...
940296	Neisseria gonorrhoeae TCDC-NG08107	1 (0.03%)	1E-102	1-316	1-316	377	100	316	ref|YP_207723.1|	thioredoxin reductase [Neisseria gonorrhoeae FA 1090] ref|YP...
1190579	Neisseria meningitidis NM3173	1 (0.03%)	1E-103	1-316	1-316	380	99	316	ref|NP_274343.1|	thioredoxin reductase [Neisseria meningitidis MC58] ref|YP_9...
1145144	Neisseria meningitidis NM607	1 (0.03%)	1E-102	1-316	1-316	379	99	316	ref|YP_002342856.1|	thioredoxin reductase [Neisseria meningitidis Z2491] ref|YP_...
1145181	Neisseria meningitidis 2003051	1 (0.03%)	1E-102	1-316	1-316	379	99	316	ref|YP_005878448.1|	thioredoxin reductase (TRXR) [Neisseria meningitidis 8013] r...
1145124	Neisseria meningitidis 94018	1 (0.03%)	1E-102	1-316	1-316	377	99	316	ref|WP_002252594.1|	thioredoxin-disulfide reductase [Neisseria meningitidis] gb|...
1145177	Neisseria meningitidis NM134	1 (0.03%)	1E-102	1-316	1-316	377	99	316	ref|WP_002239799.1|	thioredoxin reductase [Neisseria] gb|EFH22729.1| thioredoxin...
1095699	Neisseria meningitidis 98080	1 (0.03%)	1E-102	1-316	1-316	377	99	316	ref|WP_002245073.1|	thioredoxin-disulfide reductase [Neisseria meningitidis] gb|...
374833	Neisseria meningitidis 053442	1 (0.03%)	3E-85	43-316	1-274	321	99	274	ref|YP_001599369.1|	thioredoxin reductase [Neisseria meningitidis 053442] ref|WP...
486	Neisseria lactamica	1 (0.03%)	1E-101	1-314	1-314	376	97	314	ref|WP_019271791.1|	thioredoxin reductase [Neisseria lactamica]
1069608	Neisseria meningitidis 93003	1 (0.03%)	1E-100	1-316	1-316	370	97	316	ref|WP_002232589.1|	thioredoxin reductase [Neisseria meningitidis] gb|EJU52630.1...
546262	Neisseria cinerea ATCC 14685	1 (0.03%)	8E-99	1-314	34-347	366	94	314	ref|WP_003678150.1|	thioredoxin reductase [Neisseria cinerea] gb|EEZ70867.1| thi...
1095748	Neisseria sicca VK64	1 (0.03%)	1E-101	1-316	1-316	373	88	316	ref|WP_003767378.1|	thioredoxin reductase [Neisseria sicca] gb|EIG26819.1| thior...
546266	Neisseria mucosa ATCC 25996	1 (0.03%)	1E-100	1-316	1-316	372	88	316	ref|WP_003743113.1|	thioredoxin reductase [Neisseria mucosa] gb|EFC88153.1| thio...
490	Neisseria sicca	2 (0.05%)	1E-100	1-316	1-316	372	88	316	ref|WP_019271237.1|	thioredoxin reductase [Neisseria sicca]
665946	Neisseria sp. GT4A_CT1	1 (0.03%)	1E-101	1-316	1-316	374	87	316	ref|WP_009311993.1|	thioredoxin reductase [Neisseria sp. GT4A_CT1] gb|EGY60698.1...
997348	Neisseria macacae ATCC 33926	1 (0.03%)	1E-101	1-316	1-316	373	87	316	ref|WP_003778074.1|	thioredoxin reductase [Neisseria macacae] gb|EGQ76966.1| thi...
435832	Neisseria mucosa C102	1 (0.03%)	1E-101	1-316	1-316	373	87	316	ref|WP_003746139.1|	thioredoxin reductase [Neisseria mucosa] gb|EFV81757.1| thio...
547045	Neisseria sicca ATCC 29256	1 (0.03%)	1E-100	1-316	1-316	372	87	316	ref|WP_003755404.1|	thioredoxin reductase [Neisseria sicca] gb|EET46108.1| thior...
1051985	Neisseria weaveri LMG 5135	1 (0.03%)	1E-100	2-312	3-313	372	87	311	ref|WP_004284282.1|	thioredoxin reductase [Neisseria weaveri] gb|EGV35248.1| thi...