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Click the icons below each image to download the prediction in PDB format ( )

Features and Secondary Structure
	1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330 . 340 . 350 . 360 . 370 . 380 . 390 . 400 . 410 . 420 . 430 . 440 . 450 . 460 . 470 . 480 . 490 .
	MFSSTERHLTQKDPIMKPTIALIGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYFVIDTGGFEPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNKGEGGDRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEILENFPEPEAEEADAKHPVFAVIGRPNVGKSTLVNAILGEKRVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVAVNKWDGISEERREQVKRDISRKLYFLDFAKFHFISALKERGIDGLFESIQAAYNAAMIKMPTPKITRVLQTAVGRQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRIQYNVSENPYENAEDKPKKKPLRRVSLSNRIEKREGRKEEKNRFKKKTKVSVKKQFSK
tmhmm (0)	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (11%)	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
coiled-coils (0%)	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (15%)	XXXXX--XXXXX---------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXX----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXX------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
psipred	------------------EEEEE------HHHHHHHHH---EEE----------EEEEEEEE--EEEEEEE----------HHHHHHHHHHHHHHHH--EEEEEEE------HHHHHHHHHHHH----EEEEEE------HHHHHHHHHH------EEEEE---------HHHHHHHH------------EEEEEEE--HHHHHHHHHHHH---EEEEE-----EEEEEEEEEEE--EEEEEEE--------HHHHHHHHHHHHHHHHHHHH--EEEEEE-------HHHHHHHHHHHH----EEEE--HHHH----HHHHHHHHHHHHHH------EEEEEHHH---HHHHHHHHHHHHHH------HHHHHHHHHHHHHH----HH---EEEEEEEEE------EEEEEE-------HHHHHHHHHHHHHH-----EEEEEEEE------------------HHHHHHHHHHHH---------HH------HHHH---

# SignalP-4.0 gram+ predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    46	    0.107
  max. Y    18	    0.141
  max. S    11	    0.217
  mean S     1-17   0.177
       D     1-17   0.155    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.155 D-cutoff=0.450 Networks=SignalP-TM

Domain Repeats Prediction
Boundary	STD (+/-)	Consensus
--	--	--

Ginzu Domain Prediction 1
Domain	Span	Source	Reference Parent	Parent Span	Confidence	Annotations
	1-500	alignment	5dn8A_201	1-405	0.871700	--

PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA
TaxID	Species	Alignments	PSI-Blast Data (alignment with lowest E value)
			E value	Query Span	Sbjct Span	Bit Score	Identity	HSP Length	Accession	Description
528352	Neisseria gonorrhoeae FA19	1 (0.03%)	1E-156	1-500	1-500	557	100	500	ref|YP_008502161.1|	GTP-binding protein EngA [Neisseria gonorrhoeae MS11] ref|WP...
528351	Neisseria gonorrhoeae F62	1 (0.03%)	1E-155	1-500	3-502	556	100	500	ref|WP_003690874.1|	GTP-binding protein Der [Neisseria gonorrhoeae] gb|EEZ43283....
242231	Neisseria gonorrhoeae FA 1090	1 (0.03%)	1E-148	16-500	1-485	532	100	485	ref|YP_207579.1|	GTP-binding protein EngA [Neisseria gonorrhoeae FA 1090] ref...
940296	Neisseria gonorrhoeae TCDC-NG08107	1 (0.03%)	1E-148	16-500	1-485	531	100	485	ref|YP_002001217.1|	GTP-binding protein EngA [Neisseria gonorrhoeae NCCP11945] r...
1095748	Neisseria sicca VK64	1 (0.03%)	1E-149	16-500	1-485	536	98	485	ref|WP_003762980.1|	GTP-binding protein Der [Neisseria sicca] gb|EIG30347.1| rib...
1190578	Neisseria meningitidis NM518	1 (0.03%)	1E-149	16-500	1-485	535	98	485	ref|WP_002219473.1|	GTP-binding protein Der [Neisseria meningitidis] gb|EGC52808...
665946	Neisseria sp. GT4A_CT1	1 (0.03%)	1E-149	16-500	1-485	534	98	485	ref|WP_009311940.1|	GTP-binding protein Der [Neisseria sp. GT4A_CT1] gb|EGY60753...
1069613	Neisseria meningitidis NM2781	1 (0.03%)	1E-149	16-500	1-485	534	98	485	ref|WP_002236503.1|	GTP-binding protein Der [Neisseria meningitidis] gb|EJU61661...
1145146	Neisseria meningitidis NM23	1 (0.03%)	1E-149	16-500	1-485	534	98	485	ref|WP_002254459.1|	ribosome-associated GTPase EngA [Neisseria meningitidis] gb|...
1069608	Neisseria meningitidis 93003	1 (0.03%)	1E-149	16-500	1-485	534	98	485	ref|WP_002232225.1|	GTP-binding protein Der [Neisseria meningitidis] gb|EJU53435...
489653	Neisseria lactamica 020-06	1 (0.03%)	1E-148	16-500	1-485	532	98	485	ref|YP_004048965.1|	GTP-binding protein [Neisseria lactamica 020-06] ref|WP_0134...
935590	Neisseria meningitidis M0579	1 (0.03%)	1E-154	1-500	37-536	553	97	500	ref|WP_002223886.1|	GTP-binding protein Der [Neisseria meningitidis] gb|EGC58544...
374833	Neisseria meningitidis 053442	2 (0.05%)	1E-154	1-500	37-536	553	97	500	ref|YP_001598955.1|	GTP-binding protein EngA [Neisseria meningitidis 053442] ref...
663926	Neisseria meningitidis alpha153	1 (0.03%)	1E-154	1-500	37-536	552	97	500	emb|CBA06089.1|	putative GTP-binding protein [Neisseria meningitidis alpha15...
862513	Neisseria meningitidis ATCC 13091	1 (0.03%)	1E-154	1-500	37-536	551	97	500	ref|WP_002213907.1|	GTP-binding protein Der [Neisseria meningitidis] gb|EFM04240...
935595	Neisseria meningitidis M01-240013	1 (0.03%)	1E-154	1-500	37-536	551	97	500	ref|WP_002227450.1|	GTP-binding protein Der [Neisseria meningitidis] gb|EGC66428...
486	Neisseria lactamica	1 (0.03%)	1E-150	15-500	1-486	537	97	486	ref|WP_019272611.1|	GTP-binding protein Der [Neisseria lactamica]
546264	Neisseria flavescens NRL30031/H210	1 (0.03%)	1E-150	15-500	1-486	537	97	486	ref|WP_003681997.1|	GTP-binding protein Der [Neisseria flavescens] gb|EEG32733.1...
641149	Neisseria sp. oral taxon 014 str. F0314	1 (0.03%)	1E-150	9-500	1-492	537	97	492	ref|WP_009173184.1|	GTP-binding protein Der [Neisseria sp. oral taxon 014] gb|EF...
1145158	Neisseria meningitidis 73704	1 (0.03%)	1E-149	16-500	1-485	534	97	485	ref|YP_003082944.1|	GTP-binding protein EngA [Neisseria meningitidis alpha14] re...