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Job 85043 [SSGCID - NegoA.01197.a] [2018-08-01] [D-172-16-30-137.dhcp4.x.x] [Structure] [Complete] adenylate kinase - BATCH:85027

Full Structure Predictions  
Model 1

 chemical/x-pdb  MIME type  PDB file
Model 2

 chemical/x-pdb  MIME type  PDB file
Model 3

 chemical/x-pdb  MIME type  PDB file
Model 4

 chemical/x-pdb  MIME type  PDB file
Model 5

 chemical/x-pdb  MIME type  PDB file

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Features and Secondary Structure  
 
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MKALLLGAPGAGKGTQAQFITAAFGIPQISTGDMLRAAIKAGTPLGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKNGFLFDGFPRTLAQAEAMVEAGVGLDAVVEIDVSDSVIVDRMSGRRVHLASGRTYHVTYNPPKTEGKDDVTGEDLIQRDDDKEETVKKRLAVYHEQTEVLVDFYSKLEGEHAPKYIKVDGTQAVEAVKAEVLGALGK
tmhmm (0)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (12%)
--XXXXXXXXXX-------------------------------------------------------------------------------------------XXXXXXXXXXXXXXX-------------------------------------------------------------------------------------------------
coiled-coils (0%)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (0%)
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------X
psipred
-EEEEE------HHHHHHHHHHHH---EE---HHHHHHHH---HHHHHHHHHHHH--EE-HHHHHHHHHHHH------------HHHHHHHHHHHHHHH-------------HHHHHHHHH---------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHH---EEEEEE----HHHHHHHHHHHH--

# SignalP-4.0 gram+ predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    23	    0.246
  max. Y    23	    0.221
  max. S    17	    0.280
  mean S     1-22   0.191
       D     1-22   0.209    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.209 D-cutoff=0.450 Networks=SignalP-TM


Domain Repeats Prediction     Top
  Boundary     STD (+/-)     Consensus  
------


Ginzu Domain Prediction 1       Top
Domain Span Source Reference Parent   Parent Span     Confidence     Annotations  
  1-215     alignment     1ak2A_201     1-220   0.7473   PHOSPHOTRANSFERASE


PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA       Top
TaxID Species Alignments PSI-Blast Data (alignment with lowest E value)
E value Query Span Sbjct Span Bit Score Identity HSP Length Accession Description
528348Neisseria gonorrhoeae DGI21 (0.03%)1E-771-2151-215295100215ref|WP_003696842.1|adenylate kinase [Neisseria gonorrhoeae] gb|EEZ49740.1| aden...
940296Neisseria gonorrhoeae TCDC-NG081071 (0.03%)8E-781-2151-215295100215ref|YP_207556.1|adenylate kinase [Neisseria gonorrhoeae FA 1090] ref|YP_0020...
485Neisseria gonorrhoeae1 (0.03%)9E-741-2031-203282100203gb|AAO19901.1|adenlylate kinase [Neisseria gonorrhoeae]
1190579Neisseria meningitidis NM31731 (0.03%)1E-781-2151-21529899215ref|NP_273865.1|adenylate kinase [Neisseria meningitidis MC58] ref|YP_005898...
1069608Neisseria meningitidis 930031 (0.03%)5E-791-2151-21529998215ref|WP_002232195.1|adenylate kinase [Neisseria] gb|EFC87682.1| adenylate kinase...
1190569Neisseria meningitidis 960371 (0.03%)6E-791-2151-21529998215ref|YP_974853.1|adenylate kinase [Neisseria meningitidis FAM18] ref|YP_00159...
1190581Neisseria meningitidis NM28661 (0.03%)7E-791-2151-21529998215ref|YP_005882453.1|adenylate kinase [Neisseria meningitidis alpha710] ref|YP_00...
1069621Neisseria meningitidis NM30811 (0.03%)1E-781-2151-21529898215ref|WP_002242447.1|adenylate kinase [Neisseria meningitidis] gb|EJU80451.1| ade...
935598Neisseria meningitidis 961-59451 (0.03%)9E-661-1801-18025598180ref|WP_002261725.1|adenylate kinase, partial [Neisseria meningitidis] gb|EGC644...
546263Neisseria elongata subsp. glycolytica ATCC 293151 (0.03%)5E-801-21546-26030397215ref|WP_003774721.1|adenylate kinase [Neisseria elongata] gb|EFE48681.1| adenyla...
546265Neisseria lactamica ATCC 239701 (0.03%)1E-791-21572-28630197215ref|WP_003707340.1|adenylate kinase [Neisseria lactamica] gb|EEZ76603.1| adenyl...
547045Neisseria sicca ATCC 292561 (0.03%)3E-791-2151-21530097215ref|WP_003756137.1|adenylate kinase [Neisseria sicca] gb|EET45864.1| adenylate ...
546262Neisseria cinerea ATCC 146851 (0.03%)4E-791-21543-25730097215ref|WP_003677676.1|adenylate kinase [Neisseria cinerea] gb|EEZ71248.1| adenylat...
665946Neisseria sp. GT4A_CT11 (0.03%)4E-791-2151-21530097215ref|WP_009311234.1|adenylate kinase [Neisseria sp. GT4A_CT1] gb|EGY62616.1| ade...
869214Neisseria lactamica Y92-10091 (0.03%)7E-791-2151-21529997215ref|WP_003712784.1|adenylate kinase [Neisseria lactamica] emb|CBX21960.1| unnam...
1095748Neisseria sicca VK641 (0.03%)7E-791-2151-21529997215ref|WP_003769075.1|adenylate kinase [Neisseria sicca] gb|EIG24119.1| adenylate ...
490Neisseria sicca1 (0.03%)1E-781-2151-21529897215ref|WP_016688203.1|adenylate kinase [Neisseria sicca]
546267Neisseria polysaccharea ATCC 437681 (0.03%)1E-781-21572-28629897215ref|WP_003751483.1|adenylate kinase [Neisseria polysaccharea] gb|EFH23169.1| ad...
489653Neisseria lactamica 020-061 (0.03%)1E-781-2151-21529897215ref|YP_004048989.1|adenylate kinase [Neisseria lactamica 020-06] ref|WP_0134492...
596320Neisseria flavescens SK1141 (0.03%)1E-781-2151-21529897215ref|WP_003682888.1|adenylate kinase [Neisseria flavescens] gb|EER57471.1| adeny...






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