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Job 85045 [SSGCID - NegoA.17127.a] [2018-08-01] [D-172-16-30-137.dhcp4.x.x] [Structure] [Complete] glucose-6-phosphate isomerase 1 - BATCH:85027

Full Structure Predictions  
Model 1

chemical/x-pdb MIME type  PDB file 		Model 2

chemical/x-pdb MIME type  PDB file 		Model 3

chemical/x-pdb MIME type  PDB file 		Model 4

chemical/x-pdb MIME type  PDB file 		Model 5

chemical/x-pdb MIME type  PDB file

Click the icons below each image to download the prediction in PDB format ( PDB file )

Images were produced using MolScript and Raster3D!




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Features and Secondary Structure  
  
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MKHLHDLPAWSKLWNHFDDSKTLHMREMFEQDPQRAERYWLQVGGLTLDYSKNRINDETMSLLFELAREAGVPERMRQMFHGEKINTTENRAVLHVALRNRTNSPIMVDGEDVMPKVNRVLQRMGEFAHEVRSGSWLGYTNQVITDVVNIGIGGSDLGPLTMCTALKPFGHPRLNMHFVSNVDGSQLRDVLSKVHPETTLFIIASKTFTTQETLTNALTAREWFLNHAGDEEAVAKHFAAVSTNRKAVAEFGIDIANMFEFWDWVGGRYSLWSAIGLPIMLYLGEENFIEMLNGAHLMDQHFINTPLERNLPVILALIGIWYINYYGGGSHVIAPYDQHLHRLPKFIQQLDMESNGKQVTLDGKAVGHETSPIIWGETGINGQHAFFQLLHQGTHITPIDLIASLEKRSNLPGHHEILLANVFAQAEAFMCGKTPDEVRAELKAQGMDEARIEELVPHKTFSGNRPTNLILMDKVNPRNMGSLIAMYEHKTFVQGIIWGINSFDQWGVELGKQLAKTILGELTGETEPQKHDSSTERLINLYLQTNRK
tmhmm (0) 
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (2%) 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXX---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
coiled-coils (0%) 
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (5%) 
XXXX---X---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXX-------------------------------------------------------------------------XXXXXXXXX--------------XX
psipred 
-------HHHHHHHHHHHH-----HHHHHHH-HHHHHHH-EE---EEEEHHH----HHHHHHHHHHHHH--HHHHHHHHH-----------HHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHH-------EEEEEEE-------HHHHHHHHH--------EEEE-----HHHHHHHHH------EEEEEE------HHHHHHHHHHHHHHHH-------EEEEEE-----HHHHHHH-----------------EEHHH---HHHHHHH--HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHH-----------------------EE--------HHHHHHHHHH----EEEEEEEE-------------------HHHHHHH----HHHHHHHHHH----HHHHHHHHHHHHH-----EEEEEE----HHHHHHHHHHHHHHHHHHEEE--------HHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHH---

# SignalP-4.0 gram+ predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    39	    0.111
  max. Y     2	    0.117
  max. S     1	    0.138
  mean S     1-1    0.138
       D     1-1    0.125    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.125 D-cutoff=0.450 Networks=SignalP-TM


Domain Repeats Prediction     Top
  Boundary     STD (+/-)     Consensus  
------

Ginzu Domain Prediction 1       Top
Domain Span Source Reference Parent   Parent Span     Confidence     Annotations  
  1-548     alignment     2cxnA_202     1-557   0.9881   ISOMERASE


PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA       Top
TaxID Species Alignments PSI-Blast Data (alignment with lowest E value)
E value Query Span Sbjct Span Bit Score Identity HSP Length Accession Description
528352Neisseria gonorrhoeae FA191 (0.03%)0.01-5481-548823100548ref|WP_003693054.1|glucose-6-phosphate isomerase [Neisseria gonorrhoeae] gb|EEZ...
528359Neisseria gonorrhoeae SK-92-6791 (0.03%)0.01-5481-548822100548ref|WP_003691225.1|glucose-6-phosphate isomerase [Neisseria gonorrhoeae] gb|EEZ...
528351Neisseria gonorrhoeae F622 (0.06%)0.01-5481-548822100548ref|YP_207851.1|glucose-6-phosphate isomerase [Neisseria gonorrhoeae FA 1090...
521006Neisseria gonorrhoeae NCCP119451 (0.03%)0.01-5481-548822100548ref|YP_002001794.1|glucose-6-phosphate isomerase [Neisseria gonorrhoeae NCCP119...
940296Neisseria gonorrhoeae TCDC-NG081072 (0.06%)0.015-5483-536802100534ref|YP_005889729.1|glucose-6-phosphate isomerase [Neisseria gonorrhoeae TCDC-NG...
1145159Neisseria meningitidis 818581 (0.03%)0.01-5481-54882699548ref|WP_002256713.1|phosphoglucose isomerase family protein [Neisseria meningiti...
1190580Neisseria meningitidis NM32302 (0.06%)0.01-5481-54882599548ref|YP_003083403.1|glucose-6-phosphate isomerase [Neisseria meningitidis alpha1...
1069617Neisseria meningitidis 801791 (0.03%)0.01-5481-54882499548ref|WP_002239169.1|glucose-6-phosphate isomerase [Neisseria meningitidis] gb|EJ...
1069620Neisseria meningitidis NM27951 (0.03%)0.01-5481-54882499548ref|WP_002241709.1|glucose-6-phosphate isomerase [Neisseria meningitidis] emb|C...
1190581Neisseria meningitidis NM28662 (0.06%)0.01-5481-54882499548ref|YP_005882956.1|glucose-6-phosphate isomerase [Neisseria meningitidis alpha7...
1145176Neisseria meningitidis 20074612 (0.06%)0.01-5481-54882399548ref|WP_002234987.1|glucose-6-phosphate isomerase [Neisseria meningitidis] emb|C...
1145181Neisseria meningitidis 20030511 (0.03%)0.01-5481-54882399548ref|YP_005897538.1|glucose-6-phosphate isomerase [Neisseria meningitidis M04-24...
562020Neisseria meningitidis N15681 (0.03%)0.01-5481-54882299548ref|WP_002216976.1|glucose-6-phosphate isomerase [Neisseria meningitidis] gb|EG...
1069619Neisseria meningitidis NM26572 (0.06%)0.01-5481-54882299548ref|WP_002240610.1|glucose-6-phosphate isomerase [Neisseria meningitidis] gb|EJ...
1190579Neisseria meningitidis NM31731 (0.03%)0.01-5481-54882299548ref|NP_274402.1|glucose-6-phosphate isomerase [Neisseria meningitidis MC58] ...
1145130Neisseria meningitidis 611061 (0.03%)0.01-5481-54882299548ref|YP_001599432.1|glucose-6-phosphate isomerase [Neisseria meningitidis 053442...
1069608Neisseria meningitidis 930031 (0.03%)0.01-5481-54882299548ref|WP_002232644.1|glucose-6-phosphate isomerase [Neisseria meningitidis] gb|EJ...
1145177Neisseria meningitidis NM1341 (0.03%)0.01-5481-54882199548ref|WP_002220807.1|glucose-6-phosphate isomerase [Neisseria meningitidis] emb|C...
1095699Neisseria meningitidis 980801 (0.03%)0.01-5481-54882199548ref|YP_005878392.1|glucose-6-phosphate isomerase 1 (GPI 1; phosphoglucose isome...
1069613Neisseria meningitidis NM27811 (0.03%)0.01-5481-54882398548ref|WP_002235903.1|glucose-6-phosphate isomerase [Neisseria meningitidis] gb|EJ...



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