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Features and Secondary Structure
	1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330 . 340 . 350 .
	MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQSDLADAEEMLSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEIRAGTGGGEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRTDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREVQAKEAAERKSLIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQAELLAAMGD
tmhmm (0)	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (7%)	-----------------------------------------------------------------------------XXXXXXXXXXXX------XXXXXXXXXXXXXX---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
coiled-coils (13%)	--------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXX-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------------------------------------
disordered (12%)	XXX----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXX--------XXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------------------XXX
psipred	--HHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHEEEE------HHHHHHHHHHHHHHHHHHH---EEEE-----------EEEEE--HHHHHHHHHHH---EEEEE-----------EEEEEEEEEE---------------EEEEEE--------------EEEEEEE-----EEE------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------EEEEE-------------EE--HHHHH---HHHHHHHHHHHHHHHHHHH---

# SignalP-4.0 gram+ predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    66	    0.133
  max. Y    33	    0.104
  max. S    28	    0.128
  mean S     1-32   0.101
       D     1-32   0.103    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.103 D-cutoff=0.450 Networks=SignalP-TM

Domain Repeats Prediction
Boundary	STD (+/-)	Consensus
--	--	--

Ginzu Domain Prediction 1
Domain	Span	Source	Reference Parent	Parent Span	Confidence	Annotations
	1-358	alignment	4v67AX_301	1-362	0.8231	--

PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA
TaxID	Species	Alignments	PSI-Blast Data (alignment with lowest E value)
			E value	Query Span	Sbjct Span	Bit Score	Identity	HSP Length	Accession	Description
528351	Neisseria gonorrhoeae F62	1 (0.03%)	1E-139	1-358	1-358	500	100	358	ref|WP_003705858.1|	peptide chain release factor 1 [Neisseria gonorrhoeae] gb|EF...
528355	Neisseria gonorrhoeae PID1	1 (0.03%)	1E-138	1-358	1-358	499	100	358	ref|YP_208399.1|	peptide chain release factor 1 [Neisseria gonorrhoeae FA 109...
940296	Neisseria gonorrhoeae TCDC-NG08107	1 (0.03%)	1E-138	1-358	1-358	498	100	358	ref|YP_002002187.1|	peptide chain release factor 1 [Neisseria gonorrhoeae NCCP11...
1145172	Neisseria meningitidis 2005079	1 (0.03%)	1E-139	1-358	1-358	502	99	358	ref|WP_002259072.1|	peptide chain release factor 1 [Neisseria meningitidis] gb|E...
1145149	Neisseria meningitidis NM36	1 (0.03%)	1E-139	1-358	1-358	501	99	358	ref|YP_975572.1|	peptide chain release factor 1 [Neisseria meningitidis FAM18...
546265	Neisseria lactamica ATCC 23970	2 (0.05%)	1E-139	1-358	1-358	500	99	358	ref|WP_003706887.1|	peptide chain release factor 1 [Neisseria lactamica] gb|EEZ7...
935595	Neisseria meningitidis M01-240013	1 (0.03%)	1E-142	1-358	28-385	510	98	358	ref|WP_002224980.1|	peptide chain release factor 1 [Neisseria meningitidis] gb|E...
1190579	Neisseria meningitidis NM3173	1 (0.03%)	1E-140	1-358	1-358	503	98	358	ref|NP_274690.1|	peptide chain release factor 1 [Neisseria meningitidis MC58]...
1095699	Neisseria meningitidis 98080	1 (0.03%)	1E-139	1-358	1-358	502	98	358	ref|WP_002234185.1|	peptide chain release factor 1 [Neisseria meningitidis] gb|E...
546267	Neisseria polysaccharea ATCC 43768	2 (0.05%)	1E-139	1-358	1-358	502	98	358	ref|WP_003750072.1|	peptide chain release factor 1 [Neisseria polysaccharea] gb|...
1069621	Neisseria meningitidis NM3081	1 (0.03%)	1E-139	1-358	1-358	501	98	358	ref|WP_002242926.1|	peptide chain release factor 1 [Neisseria meningitidis] gb|E...
862513	Neisseria meningitidis ATCC 13091	1 (0.03%)	1E-139	1-358	1-358	501	98	358	ref|WP_002212636.1|	peptide chain release factor 1 [Neisseria meningitidis] gb|E...
1190581	Neisseria meningitidis NM2866	2 (0.05%)	1E-139	1-358	1-358	501	98	358	ref|YP_005883259.1|	peptide chain release factor I [Neisseria meningitidis alpha...
1190570	Neisseria meningitidis 2002030	1 (0.03%)	1E-139	1-358	1-358	501	98	358	ref|YP_002343218.1|	peptide chain release factor 1 [Neisseria meningitidis Z2491...
1069608	Neisseria meningitidis 93003	1 (0.03%)	1E-139	1-358	1-358	500	98	358	ref|WP_002232936.1|	peptide chain release factor 1 [Neisseria meningitidis] gb|E...
1145144	Neisseria meningitidis NM607	1 (0.03%)	1E-139	1-358	1-358	500	98	358	ref|YP_005892398.1|	peptide chain release factor I (RF-1) [Neisseria meningitidi...
487	Neisseria meningitidis	1 (0.03%)	1E-139	1-358	1-358	500	98	358	ref|WP_019742997.1|	peptide chain release factor 1 [Neisseria meningitidis]
996307	Neisseria meningitidis alpha522	1 (0.03%)	1E-137	1-358	15-372	494	98	358	emb|CCA44134.1|	peptide chain release factor 1 RF-1 [Neisseria meningitidis ...
663926	Neisseria meningitidis alpha153	1 (0.03%)	1E-136	1-358	15-372	492	98	358	emb|CBA09383.1|	peptide chain release factor 1 [Neisseria meningitidis alpha...
1069620	Neisseria meningitidis NM2795	1 (0.03%)	1E-135	1-358	1-358	489	98	358	ref|WP_002241876.1|	peptide chain release factor 1 [Neisseria meningitidis] gb|E...