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Features and Secondary Structure
	1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 .
	MAIANNKKAFHDFFIEDRIEAGLVLEGWEVKAIRAARVQLKESYIYWKKDAFYLVGCHITALPTASTHIKPDAVRPRKLLLKQSEINKLIGKTERAGYTIVPLDLHFSRGKIKMEIGLAKGKKQHDKRQSMKEADWKREKQRLIKHTR
tmhmm (0)	----------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (0%)	----------------------------------------------------------------------------------------------------------------------------------------------------
coiled-coils (0%)	----------------------------------------------------------------------------------------------------------------------------------------------------
disordered (11%)	-------------------------------------------------------------------------------------------------------------------------------XX-XXXXXXX-XXX--XXXXX
psipred	-EEE--------EEEEEEEEEEEEE--HHHHHHHH--------EEEEE--EEEEEE----HHHH-----------HHHHH--HHHHHHHHHHHH----EEEEEEEEE---EEEEEEEEE-------HHHHHHHHHHHHHHHHHHHH--

# SignalP-4.0 euk predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    36	    0.248
  max. Y    36	    0.163
  max. S     5	    0.164
  mean S     1-35   0.111
       D     1-35   0.135    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.135 D-cutoff=0.450 Networks=SignalP-noTM

Domain Repeats Prediction
Boundary	STD (+/-)	Consensus
--	--	--

Ginzu Domain Prediction 1
Domain	Span	Source	Reference Parent	Parent Span	Confidence	Annotations
	1-148	alignment	1k8hA_201	1-133	0.7342	RNA BINDING PROTEIN

PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA
TaxID	Species	Alignments	PSI-Blast Data (alignment with lowest E value)
			E value	Query Span	Sbjct Span	Bit Score	Identity	HSP Length	Accession	Description
940296	Neisseria gonorrhoeae TCDC-NG08107	1 (0.04%)	2E-55	1-148	3-150	220	100	148	ref|YP_208083.1|	SsrA-binding protein [Neisseria gonorrhoeae FA 1090] ref|YP_...
528354	Neisseria gonorrhoeae MS11	1 (0.04%)	4E-55	1-148	1-148	219	100	148	ref|YP_008502711.1|	SsrA-binding protein [Neisseria gonorrhoeae MS11] ref|WP_010...
935589	Neisseria meningitidis NZ-05/33	1 (0.04%)	8E-56	1-148	3-150	222	99	148	ref|YP_975442.1|	SsrA-binding protein [Neisseria meningitidis FAM18] ref|YP_0...
1190581	Neisseria meningitidis NM2866	1 (0.04%)	1E-55	1-148	1-148	220	99	148	ref|NP_274533.1|	SsrA-binding protein [Neisseria meningitidis MC58] ref|YP_00...
489653	Neisseria lactamica 020-06	1 (0.04%)	1E-54	1-148	1-148	217	99	148	ref|YP_004048373.1|	small protein B [Neisseria lactamica 020-06] ref|WP_01344871...
295996	Neisseria meningitidis alpha275	1 (0.04%)	9E-29	63-148	61-146	131	99	86	emb|CBA05517.1|	SsrA-binding protein [Neisseria meningitidis alpha275]
546262	Neisseria cinerea ATCC 14685	1 (0.04%)	2E-55	1-148	1-148	220	98	148	ref|WP_003674814.1|	single-stranded DNA-binding protein [Neisseria cinerea] gb|E...
490	Neisseria sicca	1 (0.04%)	4E-57	1-148	1-148	226	93	148	ref|WP_016687651.1|	single-stranded DNA-binding protein [Neisseria sicca]
1095748	Neisseria sicca VK64	1 (0.04%)	3E-58	1-148	1-148	229	92	148	ref|WP_003760109.1|	single-stranded DNA-binding protein [Neisseria] gb|EET43579....
546266	Neisseria mucosa ATCC 25996	1 (0.04%)	5E-58	1-146	1-146	228	92	146	ref|WP_003740866.1|	single-stranded DNA-binding protein [Neisseria mucosa] gb|EF...
435832	Neisseria mucosa C102	1 (0.04%)	1E-57	1-148	1-148	227	91	148	ref|WP_003679566.1|	single-stranded DNA-binding protein [Neisseria] gb|EEG34356....
1051972	Neisseria weaveri ATCC 51223	1 (0.04%)	8E-57	1-148	1-148	225	91	148	ref|WP_004286260.1|	single-stranded DNA-binding protein [Neisseria weaveri] gb|E...
1051985	Neisseria weaveri LMG 5135	1 (0.04%)	9E-57	1-148	1-148	225	91	148	ref|WP_004284980.1|	single-stranded DNA-binding protein [Neisseria weaveri] gb|E...
1030841	Neisseria wadsworthii 9715	1 (0.04%)	1E-56	1-148	1-148	224	88	148	ref|WP_009116642.1|	single-stranded DNA-binding protein [Neisseria wadsworthii] ...
641149	Neisseria sp. oral taxon 014 str. F0314	1 (0.04%)	2E-57	1-148	1-148	227	87	148	ref|WP_009173331.1|	single-stranded DNA-binding protein [Neisseria sp. oral taxo...
1032488	Neisseria shayeganii 871	1 (0.04%)	2E-57	1-148	1-148	227	86	148	ref|WP_009118114.1|	single-stranded DNA-binding protein [Neisseria shayeganii] g...
629741	Kingella oralis ATCC 51147	1 (0.04%)	1E-59	1-148	1-148	234	85	148	ref|WP_003796084.1|	single-stranded DNA-binding protein [Kingella oralis] gb|EEP...
1073362	Eikenella corrodens CC92I	1 (0.04%)	5E-57	1-147	1-147	225	85	147	ref|WP_003823084.1|	single-stranded DNA-binding protein [Eikenella corrodens] gb...
888741	Kingella denitrificans ATCC 33394	1 (0.04%)	2E-58	1-148	49-196	230	84	148	ref|WP_003780789.1|	SsrA-binding protein [Kingella denitrificans] gb|EGC18506.1|...
1127694	Neisseria sp. oral taxon 020 str. F0370	1 (0.04%)	4E-58	1-148	1-148	229	84	148	ref|WP_009751849.1|	SsrA-binding protein [Neisseria sp. oral taxon 020] gb|EKY09...