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Job 85107 [SSGCID - MygeA.00588.a] [2018-08-03] [D-172-16-30-137.dhcp4.x.x] [Structure] [Complete] Signal recognition particle receptor FtsY (MG_297) - BATCH:85100

Full Structure Predictions  
Model 1

 chemical/x-pdb  MIME type  PDB file
Model 2

 chemical/x-pdb  MIME type  PDB file
Model 3

 chemical/x-pdb  MIME type  PDB file
Model 4

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Model 5

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Features and Secondary Structure  
 
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MGFLSKLIAKLKPKKSVAKQLKEEVEKQSLFQTNNKTYYQGLKKSATTFAKTINELSKRYVNVDEQFKENLFEGLVLLDVGYHAANKICDAIIEQIKLNRITDFQLIKELIIDQIIVYYIQDKLFDTDLIVKPNFTNVYLFVGVNGVGKTTTLAKIADFFIKQNKRVLLVAGDTFRAGAIEQLNQWAKLLNCDIVLPNPKEQTPAVIFRGVKKGIDDKYDFVLCDTSGRLQNKLNLMNELQKIYQIIQKVSGSEPSETLLVLDGTVGQTGLSQAKVFNEFSKLTGIVLTKMDGSAKGGIILAIKDMFNLPVKLIGFGEKTSDLAIFDLEKYVLGLLNNLNLDNKEN
tmhmm (0)
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (8%)
--------------------------------------------------------------------------------------------------------------XXXXXXXXXXXX------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXX
coiled-coils (0%)
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (12%)
X--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XX-XXXXXX
psipred
-------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHH----------------EEEEEE------HHHHHHHHHHHHHH----EEEEEE----HHHHHHHHHHHHH---EEE-------HHHHHHHHHHHHHH----EEEEE-------HHHHHHHHHHHHHHHHH-------EEEEEEE----HHHHHHHHHHHH-----EEEEE--------HHHHHHHHHH---EEEEE----HHH-----HHHHHHHH-----HH----

# SignalP-4.0 gram+ predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    19	    0.142
  max. Y    19	    0.284
  max. S     3	    0.707
  mean S     1-18   0.602
       D     1-18   0.408    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.408 D-cutoff=0.450 Networks=SignalP-TM


Domain Repeats Prediction     Top
  Boundary     STD (+/-)     Consensus  
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Ginzu Domain Prediction 1       Top
Domain Span Source Reference Parent   Parent Span     Confidence     Annotations  
  1-346     alignment     2q9aA_205     1-304   0.8678   SIGNALING PROTEIN


PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA       Top
TaxID Species Alignments PSI-Blast Data (alignment with lowest E value)
E value Query Span Sbjct Span Bit Score Identity HSP Length Accession Description
708616Mycoplasma gallisepticum str. F1 (0.03%)1E-1031-3421-34238154342ref|YP_005880463.1|signal recognition particle receptor ftsY [Mycoplasma gallis...
710128Mycoplasma gallisepticum str. R(high)1 (0.03%)1E-1021-3421-34237954342ref|NP_852953.2|signal recognition particle receptor ftsY [Mycoplasma gallis...
626095Ureaplasma urealyticum serovar 8 str. ATCC 276181 (0.03%)1E-931-3441-35135051351ref|YP_002284564.1|signal recognition particle-docking protein FtsY [Ureaplasma...
519849Ureaplasma urealyticum serovar 7 str. ATCC 278191 (0.03%)2E-931-3441-35134951351ref|WP_004026692.1|cell division protein FtsY [Ureaplasma urealyticum] gb|EDU57...
550773Ureaplasma urealyticum serovar 9 str. ATCC 331751 (0.03%)2E-931-3441-35134951351ref|WP_004026840.1|cell division protein FtsY [Ureaplasma urealyticum] gb|EDT49...
626096Ureaplasma urealyticum serovar 2 str. ATCC 278142 (0.05%)2E-931-3441-35134950351ref|WP_004026269.1|cell division protein FtsY [Ureaplasma urealyticum] gb|EDX53...
1154757Leuconostoc pseudomesenteroides 48821 (0.03%)1E-10829-339119-43139747313ref|WP_004910502.1|cell division protein FtsY [Leuconostoc pseudomesenteroides]...
33968Leuconostoc pseudomesenteroides1 (0.03%)1E-10728-33948-36139647314ref|WP_010292440.1|signal recognition particle-docking protein FtsY, partial [L...
1107880Leuconostoc mesenteroides subsp. mesenteroides J181 (0.03%)1E-10638-341140-44539047306ref|YP_005174810.1|signal recognition particle-docking protein FtsY [Leuconosto...
203120Leuconostoc mesenteroides subsp. mesenteroides ATCC 82932 (0.05%)1E-10638-341136-44139047306ref|YP_819028.1|signal recognition particle-docking protein FtsY [Leuconosto...
1246Leuconostoc lactis1 (0.03%)1E-10833-3393-31039846308ref|WP_010000175.1|signal recognition particle-docking protein FtsY, partial [L...
1229758Leuconostoc carnosum JB161 (0.03%)1E-10635-34195-40239046308ref|YP_006795353.1|signal recognition particle-docking protein FtsY [Leuconosto...
888027Lactobacillus delbrueckii subsp. lactis DSM 200721 (0.03%)6E-9938-339119-42236746304ref|YP_004034327.1|signal recognition particle-docking protein ftsy [Lactobacil...
784613Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-41 (0.03%)2E-9838-339128-43136546304ref|WP_003612051.1|cell division protein FtsY [Lactobacillus delbrueckii] gb|EF...
1256208Lactobacillus paracasei subsp. paracasei Lpp411 (0.03%)1E-11229-3431-31640945316gb|EPC73274.1|signal recognition particle-docking protein FtsY, partial [L...
762051Leuconostoc kimchii IMSNU 111541 (0.03%)1E-10635-339147-45239145306ref|YP_003622129.1|signal recognition particle receptor FtsY [Leuconostoc kimch...
979982Leuconostoc sp. C21 (0.03%)1E-10635-339113-41839145306ref|YP_004705487.1|signal recognition particle-docking protein FtsY [Leuconosto...
525366Lactobacillus vaginalis ATCC 495402 (0.05%)1E-10531-343143-45638745314ref|WP_003717353.1|cell division protein FtsY [Lactobacillus vaginalis] gb|EEJ3...
1209372Bacillus sp. WBUNB0091 (0.03%)1E-10353-3441-29238245292ref|WP_017656602.1|cell division protein FtsY [Bacillus sp. WBUNB009]
349519Leuconostoc citreum KM202 (0.05%)1E-10232-34190-40037745311ref|YP_001728560.1|Signal recognition particle-docking protein FtsY [Leuconosto...






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