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Job 85110 [SSGCID - MygeA.01012.a] [2018-08-03] [D-172-16-30-137.dhcp4.x.x] [Structure] [Complete] Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (MG_100) - BATCH:85100

Full Structure Predictions  
Model 1

chemical/x-pdb MIME type  PDB file 		Model 2

chemical/x-pdb MIME type  PDB file 		Model 3

chemical/x-pdb MIME type  PDB file 		Model 4

chemical/x-pdb MIME type  PDB file 		Model 5

chemical/x-pdb MIME type  PDB file

Click the icons below each image to download the prediction in PDB format ( PDB file )

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Features and Secondary Structure  
  
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MINFEAIIGIEVHVVLNTASKMFSKAPNRVDNQKINHFIDPIDLGLPGTLPQVNELAVYKALLLADALKMKTVTNKLVFDRKHYFYQDLPKGFQITQQNYPFAKNGVVTINVDAIEKPIYIDRFHLEEDTAKQHFNHDQILLDFNRCGAPLIEVVTLPVINTAKEAKAYLQKLRQILIVNNISNAKLEDGSMRSDCNVSVRLKGQRQLGTKIEIKNINSLNNVEKAIDLEINRQVKALINGETLSQATLSFDDKTNNNVFMRKKDNTIDYRYFIEPNIMTSNIDDLLLEKPVAFQLEQFQKELIDSNVNPQLVQLVVDDATIFSAFQTINSVIKNPQETIRWLCIELIGQLNKTNSSLTANLIQDLITLIEMLKAAKVNQKQAKQLITLMIETKKDPKSLAKLHNLEQITDPKELQKIIKKIFQENEKEILKNIDRIERIQKLIIGQVMHKTNNRANPQQVFIIVENMLHEVRERDS
tmhmm (0) 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (6%) 
-------------------------------------------------------XXXXXXXXXXXXXXXX--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXX--------------------------------------------------------------------------------------------
coiled-coils (0%) 
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (2%) 
X------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------X-XXXXXX
psipred 
-----EEEEEEEEEE------EEEE------------EE---------------HHHHHHHHHHHHHH--HHH----EE-EE-----------------------EEEEEEE--EEEEEEEEEE---------------EEEE--------EEEE-------HHHHHHHHHHHHHHHHHHH-----------------------------EEEEE---HHHHHHHHHHHHHHHHHHHHH------------------EE-------HHHH---------EEEEHHHHHHH-----HHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH----HH------HHHHHHHHH-----HHHHHHHHHHHHH----HHHHHHHH-------HHHHHHHHHHHHHH-HHHHHHHH---HHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHH----

# SignalP-4.0 gram+ predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    22	    0.162
  max. Y    22	    0.181
  max. S    21	    0.283
  mean S     1-21   0.164
       D     1-21   0.175    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.175 D-cutoff=0.450 Networks=SignalP-TM


Domain Repeats Prediction     Top
  Boundary     STD (+/-)     Consensus  
------

Ginzu Domain Prediction 1       Top
Domain Span Source Reference Parent   Parent Span     Confidence     Annotations  
  1-477     alignment     3ip4B_201     1-482   0.9348   LIGASE


PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA       Top
TaxID Species Alignments PSI-Blast Data (alignment with lowest E value)
E value Query Span Sbjct Span Bit Score Identity HSP Length Accession Description
662947Mycoplasma genitalium M22881 (0.03%)1E-1451-4771-477521100477ref|NP_072762.1|aspartyl/glutamyl-tRNA amidotransferase subunit B [Mycoplasm...
482193Wolbachia endosymbiont of Jamides alecto1 (0.03%)2E-49165-2851-12120346121gb|ABX44406.1|glutamyl-tRNA(Gln) amidotransferase subunit B, partial [Wolb...
486908Wolbachia endosymbiont of Calyptratae sp. JKS-3741 (0.03%)2E-49165-2851-12120346121gb|ABY49531.1|glutamyl-tRNA (Gln) amidotransferase subunit B [Wolbachia en...
482218Wolbachia endosymbiont of Pheidole sp.1 (0.03%)2E-49165-2851-12120346121gb|ABX44415.1|glutamyl-tRNA(Gln) amidotransferase subunit B, partial [Wolb...
225363Wolbachia endosymbiont of Rhagoletis cerasi1 (0.03%)3E-49165-2851-12120246121gb|ABI36759.1|glutamyl-tRNA(Gln) amidotransferase subunit B [Wolbachia end...
400222Wolbachia endosymbiont of Incisitermes snyderi1 (0.03%)1E-48165-2851-12120146121gb|ABI36758.1|glutamyl-tRNA(Gln) amidotransferase subunit B [Wolbachia end...
486906Wolbachia endosymbiont of Calyptratae sp. JKS-3551 (0.03%)1E-48165-2831-11920146119gb|ABY49510.1|glutamyl-tRNA (Gln) amidotransferase subunit B [Wolbachia en...
482209Wolbachia endosymbiont of Pheidole coloradensis1 (0.03%)1E-48165-2851-12120146121gb|ABX44410.1|glutamyl-tRNA(Gln) amidotransferase subunit B, partial [Wolb...
482212Wolbachia endosymbiont of Pheidole minutula1 (0.03%)1E-48165-2851-12120146121gb|ABX44423.1|glutamyl-tRNA(Gln) amidotransferase subunit B, partial [Wolb...
482225Wolbachia endosymbiont of Rhytidoponera metallica1 (0.03%)2E-48165-2851-12120046121gb|ABX44440.1|glutamyl-tRNA(Gln) amidotransferase subunit B, partial [Wolb...
482187Wolbachia endosymbiont of Crematogaster sp.1 (0.03%)3E-48165-2851-12119946121gb|ABX44416.1|glutamyl-tRNA(Gln) amidotransferase subunit B, partial [Wolb...
400216Wolbachia endosymbiont of Camponotus pennsylvanicus1 (0.03%)3E-48165-2851-12119946121gb|ABI36742.1|glutamyl-tRNA(Gln) amidotransferase subunit B [Wolbachia end...
955Wolbachia pipientis9 (0.3%)4E-51165-2851-12120945121gb|ABY49506.1|glutamyl-tRNA (Gln) amidotransferase subunit B [Wolbachia en...
482206Wolbachia endosymbiont of Ocymyrmex picardi1 (0.03%)5E-51165-2851-12120845121gb|ABX44459.1|glutamyl-tRNA(Gln) amidotransferase subunit B, partial [Wolb...
175927Wolbachia endosymbiont of Tetranychus kanzawai1 (0.03%)6E-51165-2851-12120845121gb|ABI36735.1|glutamyl-tRNA(Gln) amidotransferase subunit B [Wolbachia end...
644942Wolbachia endosymbiont of Colotis amata1 (0.03%)2E-50165-2851-12120745121gb|ABI36756.1|glutamyl-tRNA(Gln) amidotransferase subunit B [Wolbachia end...
486903Wolbachia endosymbiont of Apoica sp. JKS-3431 (0.03%)1E-50165-2851-12120745121gb|ABY49497.1|glutamyl-tRNA (Gln) amidotransferase subunit B [Wolbachia en...
644945Wolbachia endosymbiont of Eurema hecabe1 (0.03%)9E-51165-2851-12120745121gb|ABX44454.1|glutamyl-tRNA(Gln) amidotransferase subunit B, partial [Wolb...
679950Wolbachia endosymbiont of calyptrate muscoid fly1 (0.03%)2E-50165-2851-12120645121gb|ACX51168.1|aspartyl/glutamyl-tRNA(Gln) amidotransferase subunit B [Wolb...
486922Wolbachia endosymbiont of Chloropidae sp. JKS-3861 (0.03%)2E-50165-2851-12120645121gb|ABY49544.1|glutamyl-tRNA (Gln) amidotransferase subunit B [Wolbachia en...



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