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Job 85112 [SSGCID - MygeA.01187.a] [2018-08-03] [D-172-16-30-137.dhcp4.x.x] [Structure] [Complete] Glutamate--tRNA ligase (MG_462) - BATCH:85100

Full Structure Predictions  
Model 1

 chemical/x-pdb  MIME type  PDB file
Model 2

 chemical/x-pdb  MIME type  PDB file
Model 3

 chemical/x-pdb  MIME type  PDB file
Model 4

 chemical/x-pdb  MIME type  PDB file
Model 5

 chemical/x-pdb  MIME type  PDB file

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Features and Secondary Structure  
 
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MEKIRTRYAPSPTGYLHVGGTRTAIFNFLLAKHFNGEFIIRIEDTDTERNIKEGINSQFDNLRWLGVIADESVYNPGNYGPYLQSQKLAVYKKLAFDLIEKNLAYRCFCSKEKLESDRKQAINNHKTPKYLGHCRNLHSKKITNHLEKNDPFTIRLKINNEAEYSWNDLVRGQITIPGSALTDIVILKANGVATYNFAVVIDDYDMEITDVLRGAEHISNTAYQLAIYQALGFKRIPRFGHLSVIVDESGKKLSKRDEKTTQFIEQFKQQGYLPEALLNFLALLGWHPQYNQEFFNLKQLIENFSLSRVVSAPAFFDIKKLQWINANYIKQLTDNAYFNFIDNYLDVKVDYLKDKNREISLLFKNQITHGVQINELIRESFATKIGVENLAKKSHILFKNIKLFLEQLAKSLQGLEEWKAEQIKTTINKVGAVFNLKGKQLFMPIRLIFTNKEHGPDLAHIIEIFDKESAINLIKQFINATNLF
tmhmm (0)
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (2%)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXX--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
coiled-coils (0%)
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (7%)
X---------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXX--------XXXXXXXXXX--------------------------------------------------------------------------------------------------------XX-X------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
psipred
----EEEE-------HHHHHHHHHHHHHHHHHHH--EEEEEE---------HHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHH----EE----HHHHHHHHHHHHH---------------HHHHHHHHH----EEEEEE------EEEEE-EEEEEEE--------EEEEE---------------------EEE--HHHH--HHHHHHHHH-------EEEEEEEEE-----EE----------HHHHHH----HHHHHHHHHHH------------HHHHHH---HHH---------HHHHHHHHHHHHHH--HHHHHHHHHHHHHHH----HHHHHHHHHHHHHH---HHHHHHHHHHH---------HHHHHHH--HHHHHHHHHHHHHHH------HHHHHHHHHHHHHHH---HHHHHHHHHHHHH-------HHHHHHHH-HHHHHHHHHHHHHHH---

# SignalP-4.0 gram- predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    32	    0.155
  max. Y    32	    0.162
  max. S    11	    0.283
  mean S     1-31   0.207
       D     1-31   0.183    0.570  NO
Name=tmp_signalp_seq	SP='NO' D=0.183 D-cutoff=0.570 Networks=SignalP-noTM


Domain Repeats Prediction     Top
  Boundary     STD (+/-)     Consensus  
------


Ginzu Domain Prediction 1       Top
Domain Span Source Reference Parent   Parent Span     Confidence     Annotations  
  1-484     alignment     6brlA_202     1-503   0.9418   --


PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA       Top
TaxID Species Alignments PSI-Blast Data (alignment with lowest E value)
E value Query Span Sbjct Span Bit Score Identity HSP Length Accession Description
663918Mycoplasma genitalium M23211 (0.03%)1E-1591-4841-484568100484ref|YP_006600008.1|glutamyl-tRNA ligase [Mycoplasma genitalium M2321] ref|WP_01...
2097Mycoplasma genitalium1 (0.03%)2E-10188-2361-49749649emb|CAA43750.1|unnamed protein product [Mycoplasma genitalium]
722438Mycoplasma pneumoniae FH1 (0.03%)1E-1521-4841-48454672484ref|YP_005881665.1|glutamate--tRNA ligase [Mycoplasma pneumoniae FH] ref|WP_014...
1112856Mycoplasma pneumoniae 3091 (0.03%)1E-1521-4841-48454572484ref|YP_005175929.1|glutamyl-tRNA synthetase [Mycoplasma pneumoniae 309] ref|WP_...
400667Acinetobacter baumannii ATCC 179781 (0.03%)3E-173-562-55975654ref|YP_001086204.1|glutamyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978...
495036Geobacillus sp. G11MC161 (0.03%)1E-1152-2953-29642249295ref|WP_008882044.1|glutamyl-tRNA synthetase [Geobacillus sp. G11MC16] gb|EDY041...
708616Mycoplasma gallisepticum str. F1 (0.03%)1E-1391-4811-49450248494ref|YP_005881033.1|Glutamyl-tRNA synthetase (Glutamate--tRNA ligase) (GluRS) [M...
550748Ureaplasma urealyticum serovar 4 str. ATCC 278161 (0.03%)1E-1413-4822-48250847482ref|WP_004026426.1|glutamyl-tRNA synthetase [Ureaplasma urealyticum] gb|EDY7487...
626096Ureaplasma urealyticum serovar 2 str. ATCC 278141 (0.03%)1E-1413-4822-48250847482ref|YP_002285054.1|glutamyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 ...
51173Ureibacillus thermosphaericus1 (0.03%)1E-1772-4773-48462945484ref|WP_016838533.1|glutamyl-tRNA synthase [Ureibacillus thermosphaericus]
1276229Spiroplasma syrphidicola EA-11 (0.03%)1E-1603-4804-48457045482ref|YP_008026288.1|glutamyl-tRNA synthetase [Spiroplasma syrphidicola EA-1] ref...
766747synthetic Mycoplasma mycoides JCVI-syn1.01 (0.03%)1E-1435-4754-47951445478gb|ACU78939.1|glutamate--tRNA ligase [Mycoplasma mycoides subsp. capri str...
197Campylobacter jejuni1 (0.03%)2E-272-893-821304488emb|CAA05150.1|glutamine tRNA synthetase [Campylobacter jejuni]
3659Cucumis sativus1 (0.03%)8E-24176-2751-9711844100gb|ABK55710.1|L-glutamate:tRNA-Glu ligase [Cucumis sativus]
1136178Geobacillus thermoglucosidans TNO-09.0201 (0.03%)1E-1802-4783-48563743485ref|YP_003987554.1|glutamyl-tRNA synthetase [Geobacillus sp. Y4.1MC1] ref|YP_00...
471223Geobacillus sp. WCH701 (0.03%)1E-1802-4783-48563643485ref|YP_002948294.1|glutamyl-tRNA synthetase [Geobacillus sp. WCH70] ref|WP_0127...
1239783Bacillus atrophaeus UCMB-51371 (0.03%)1E-1793-4774-48363443482ref|YP_003975662.1|glutamyl-tRNA synthetase [Bacillus atrophaeus 1942] ref|WP_0...
1302650Bacillus subtilis subsp. subtilis str. BAB-11 (0.03%)1E-1783-4764-48263343481ref|YP_004206049.1|glutamyl-tRNA synthetase [Bacillus subtilis BSn5] ref|YP_005...
1147161Bacillus subtilis subsp. subtilis 6051-HGW1 (0.03%)1E-1793-4764-48263343481ref|NP_387973.1|glutamate--tRNA ligase [Bacillus subtilis subsp. subtilis st...
1236548Bacillus subtilis subsp. inaquosorum KCTC 134291 (0.03%)1E-1793-4764-48263343481ref|WP_003242037.1|glutamyl-tRNA synthetase [Bacillus subtilis] gb|ELS59270.1| ...






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