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Job 85113 [SSGCID - MygeA.01331.a] [2018-08-03] [D-172-16-30-137.dhcp4.x.x] [Structure] [Complete] Phosphoglycerate kinase (MG_300) - BATCH:85100

Full Structure Predictions  
Model 1

 chemical/x-pdb  MIME type  PDB file
Model 2

 chemical/x-pdb  MIME type  PDB file
Model 3

 chemical/x-pdb  MIME type  PDB file
Model 4

 chemical/x-pdb  MIME type  PDB file
Model 5

 chemical/x-pdb  MIME type  PDB file

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Features and Secondary Structure  
 
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MLNFKTLQAIDFQNKTVVLRSDFNVPMINGVISDSERILAGLDTIKFLVKKNCKIVLLSHLSRIKSLEDKLNNKKSLKPVAELLQQLLPTVKVQFSCKNTGAEVKQKVQALAFGEILLLENTRYCDVNDKGEIVKLESKNDPELAKFWASLGEIFVNDAFGTAHRKHASNAGIAKYVAKSCIGFLMEKELKNLSYLIQSPQKPFVVVLGGAKVSDKLKVVENLLKLADNILIGGGMVNTFLKAKGKATANSLVEKELIDVAKQILDKDTHNKIVLAIDQVMGSEFKDQTGITLDVSDKIQEQYQSYMSLDVGSKTIALFESYLKTAKTIFWNGPLGVFEFTNFAKGTSKIGEIIAKNKTAFSVIGGGDSAAAVKQMQLSDQFSFISTGGGASLALIGGEELVGISDIQKNS
tmhmm (0)
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low complexity (0%)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
coiled-coils (0%)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (4%)
XXX-------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXX----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XX
psipred
------HHH------EEEEEEE-------------HHHHHHHHHHHHHHH---EEEEE------------------HHHHHHHHHHH----EEEE------HHHHHHHHH-----EEEE----------------HHHHH-HHHHHHHHHH--EEEE----HHHH------------------HHHHHHHHHHHHHHH------EEEE-----HHHHHHHHHHHHHHHHH----HHHHHHHHH--------HHHHHHHHHHHHHHHHHH---------EEEE---------EEEE-----------------HHHHHHHHHHHH---EEEEE--------HHH--HHHHHHHHHHH----EEEE--HHHHHHHHHH------EEEE---HHHHHHH-------HHHHHH--

# SignalP-4.0 gram+ predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    21	    0.117
  max. Y    21	    0.143
  max. S     8	    0.253
  mean S     1-20   0.164
       D     1-20   0.151    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.151 D-cutoff=0.450 Networks=SignalP-TM


Domain Repeats Prediction     Top
  Boundary     STD (+/-)     Consensus  
------


Ginzu Domain Prediction 1       Top
Domain Span Source Reference Parent   Parent Span     Confidence     Annotations  
  1-411     alignment     5bt8B_202     1-397   0.7076   --


PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA       Top
TaxID Species Alignments PSI-Blast Data (alignment with lowest E value)
E value Query Span Sbjct Span Bit Score Identity HSP Length Accession Description
722438Mycoplasma pneumoniae FH1 (0.03%)1E-1411-4101-40950770410ref|YP_005881438.1|phosphoglycerate kinase [Mycoplasma pneumoniae FH] ref|WP_01...
766747synthetic Mycoplasma mycoides JCVI-syn1.01 (0.03%)1E-1503-4105-40453854410gb|ACU78555.1|phosphoglycerate kinase [Mycoplasma mycoides subsp. capri st...
340047Mycoplasma capricolum subsp. capricolum ATCC 273432 (0.07%)1E-1493-4105-40453554410ref|YP_424599.1|phosphoglycerate kinase [Mycoplasma capricolum subsp. capric...
880447Mycoplasma leachii PG501 (0.03%)1E-1483-4105-40453054410ref|YP_004047386.1|phosphoglycerate kinase [Mycoplasma leachii PG50] ref|WP_013...
862259Mycoplasma mycoides subsp. capri LC str. 950101 (0.03%)1E-1503-4105-40453753410ref|YP_004400343.1|phosphoglycerate kinase [Mycoplasma mycoides subsp. capri LC...
525367Listeria grayi DSM 206011 (0.03%)1E-1572-4101-39656250409ref|WP_003759023.1|phosphoglycerate kinase [Listeria grayi] gb|EFI84868.1| phos...
1033810Haloplasma contractile SSD-17B1 (0.03%)1E-1572-4101-39556150409ref|WP_008825106.1|phosphoglycerate kinase [Haloplasma contractile] gb|ERJ12318...
1130798Lactobacillus mucosae LM11 (0.03%)1E-1552-4101-40255650411ref|WP_006500393.1|phosphoglycerate kinase [Lactobacillus mucosae] gb|EHT15772....
525366Lactobacillus vaginalis ATCC 495401 (0.03%)1E-1552-4101-40355550412ref|WP_003717601.1|phosphoglycerate kinase [Lactobacillus vaginalis] gb|EEJ4081...
1297579Fusobacterium nucleatum CC531 (0.03%)1E-1524-4102-39854650409ref|YP_008476916.1|phosphoglycerate kinase [Fusobacterium nucleatum subsp. vinc...
851Fusobacterium nucleatum4 (0.13%)1E-1524-4102-39854450409ref|WP_008802839.1|phosphoglycerate kinase [Fusobacterium nucleatum] gb|EEO4003...
936562Fusobacterium sp. CM211 (0.03%)1E-1514-4102-39854250409ref|WP_005912197.1|phosphoglycerate kinase [Fusobacterium nucleatum] gb|EJG0968...
546275Fusobacterium periodonticum ATCC 336931 (0.03%)1E-1514-4102-39854150409ref|WP_005970498.1|phosphoglycerate kinase [Fusobacterium periodonticum] gb|EFE...
693991Fusobacterium nucleatum subsp. polymorphum F04011 (0.03%)1E-1514-4102-39854150409ref|WP_008700720.1|phosphoglycerate kinase [Fusobacterium nucleatum] gb|EEO4213...
1204476Fusobacterium nucleatum CTI-31 (0.03%)1E-1514-4102-39854150409ref|WP_005905899.1|phosphoglycerate kinase [Fusobacterium nucleatum] gb|EGN6479...
999414Fusobacterium nucleatum subsp. animalis F04191 (0.03%)1E-1514-4102-39854150409ref|WP_005908977.1|phosphoglycerate kinase [Fusobacterium nucleatum] gb|EHO7932...
393480Fusobacterium nucleatum subsp. polymorphum ATCC 109531 (0.03%)1E-1514-4102-39854050409ref|WP_005897733.1|phosphoglycerate kinase [Fusobacterium nucleatum] gb|EDK8907...
1292033Mycoplasma putrefaciens Mput92311 (0.03%)1E-1503-4105-40453850410ref|YP_004790101.1|phosphoglycerate kinase [Mycoplasma putrefaciens KS1] ref|YP...
265311Mesoplasma florum L11 (0.03%)1E-1494-4106-40453650409ref|YP_053819.1|phosphoglycerate kinase [Mesoplasma florum L1] ref|WP_011183...
526218Sebaldella termitidis ATCC 333861 (0.03%)1E-1632-4101-39958049411ref|YP_003307045.1|phosphoglycerate kinase [Sebaldella termitidis ATCC 33386] r...






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