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Features and Secondary Structure
	1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330 . 340 . 350 . 360 . 370 . 380 . 390 . 400 . 410 . 420 . 430 . 440 . 450 . 460 . 470
	MRSNILSLRAILDKKPSAINDVLTSINAKIELNKSSNFLLKNTVEIYSKKINKSDEKILLNNIPYVLKDNIATKDIVTTGGSLFLKNYLPPFSATVFELLEMNGALLVGKANMDEFGLGGTGSYSAFGVVHHPENSSLIAGGSSSGSAYAVAKDIVPFSIATDTGDSIRRPASICNVVGFKPTYGLISRNGVFPYAPSMDHVGIFAKFVSDIAIVSDVVIKHDKTDFSSQKSPDENQFFNELAIPFTRSIRFGYLKPLEKLFNKHLQKKWNNLKKTLEQKNYQLIPLDFDVELLKVIDSIYKIISYSEAVSCYSNLTGIVFGQKVFEPNSPSNFDQTITRNRDQFLGKQLKRRFVIGAFATDEKNFEKYFEKAQKIRRVLVDNFLNLFSDVDFVLSPSASCFASTIEDIQANKPYTNIIDDFLQLANFAGSPSITIPWLVQTKDQTIGLSISANCFEDKKLLQIAYWFEQLFDLNHD
tmhmm (0)	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (6%)	---------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXX----------------------------------------------------------XXXXXXXXXXXX-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
coiled-coils (0%)	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (3%)	XXXXXX-XX-----------------------------------------XX-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXX
psipred	------HHHHHHHHHHHHHHHHHHHH--EEEE-HHHHHHHHHHHHHHHHHHH-----------EEEEEE--------HHH--HHH--------HHHHHHHHH---EEEEH---HHH----------------------------HHHHHHHH-----EEEE-----HHHHHHHH---EEE--------------------EE-EE---HHHHHHHHHHH-----------------HHHHHH--------EEEEE--------HHHHHHHHHHHHHHHH---EEEEE-----HHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHH--HHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHH----EEEE----------------HHHHHHHHHHHHHHHHH--HHEEEE--------EEHHHH------HHHHHHHHHHHHHH------

# SignalP-4.0 gram+ predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    47	    0.118
  max. Y    20	    0.216
  max. S    18	    0.472
  mean S     1-19   0.409
       D     1-19   0.292    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.292 D-cutoff=0.450 Networks=SignalP-TM

Domain Repeats Prediction
Boundary	STD (+/-)	Consensus
--	--	--

Ginzu Domain Prediction 1
Domain	Span	Source	Reference Parent	Parent Span	Confidence	Annotations
	1-477	alignment	2dqnA_201	1-486	0.8955	LIGASE

PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA
TaxID	Species	Alignments	PSI-Blast Data (alignment with lowest E value)
			E value	Query Span	Sbjct Span	Bit Score	Identity	HSP Length	Accession	Description
2097	Mycoplasma genitalium	1 (0.03%)	1E-124	49-477	6-434	452	100	429	ref|WP_009885657.1|	aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycoplasm...
515608	Ureaplasma parvum serovar 1 str. ATCC 27813	1 (0.03%)	1E-89	2-473	3-473	337	44	483	ref|WP_006689272.1|	glutamyl-tRNA amidotransferase subunit A [Ureaplasma parvum]...
626096	Ureaplasma urealyticum serovar 2 str. ATCC 27814	1 (0.03%)	4E-99	2-473	3-473	369	43	480	ref|YP_002284992.1|	aspartyl/glutamyl-tRNA amidotransferase subunit A [Ureaplasm...
515611	Ureaplasma urealyticum serovar 13 str. ATCC 33698	1 (0.03%)	1E-98	2-473	3-473	367	43	480	ref|WP_004027144.1|	glutamyl-tRNA amidotransferase subunit A [Ureaplasma urealyt...
766747	synthetic Mycoplasma mycoides JCVI-syn1.0	1 (0.03%)	1E-105	2-476	6-480	387	38	482	gb|ACU78851.1|	glutamyl-tRNA(Gln) amidotransferase subunit A [Mycoplasma my...
347257	Mycoplasma agalactiae PG2	1 (0.03%)	1E-99	46-477	27-437	370	37	432	ref|YP_001256855.1|	amidase [Mycoplasma agalactiae PG2] ref|WP_011949870.1| amid...
469597	Coprobacillus sp. 8_2_54BFAA	1 (0.03%)	1E-124	25-476	37-476	451	35	455	ref|WP_003537816.1|	aspartyl-tRNA amidotransferase [Erysipelotrichaceae] gb|EDS1...
2133	Spiroplasma citri	1 (0.03%)	1E-115	4-476	5-480	421	35	482	emb|CAK99791.1|	putative glutamyl-trna(gln) amidotransferase subunit a trans...
518637	Eubacterium biforme DSM 3989	1 (0.03%)	1E-127	16-475	13-451	463	34	463	ref|WP_003864213.1|	aspartyl-tRNA amidotransferase [[Eubacterium] biforme] gb|EE...
451640	Catenibacterium mitsuokai DSM 15897	1 (0.03%)	1E-126	4-476	5-474	457	34	477	ref|WP_006506604.1|	aspartyl-tRNA amidotransferase [Catenibacterium mitsuokai] g...
428126	Clostridium spiroforme DSM 1552	1 (0.03%)	1E-124	4-476	5-476	452	34	479	ref|WP_004610226.1|	aspartyl-tRNA amidotransferase [[Clostridium] spiroforme] gb...
1116211	Mycoplasma hyopneumoniae 168-L	1 (0.03%)	2E-77	52-470	29-431	296	33	419	ref|YP_005888125.1|	Glutamyl-tRNA amidotransferase subunit A [Mycoplasma hyopneu...
754503	Mycoplasma hyopneumoniae 7422	1 (0.03%)	2E-76	52-470	29-431	293	33	419	ref|YP_008291434.1|	glutamyl-tRNA amidotransferase subunit A [Mycoplasma hyopneu...
289376	Thermodesulfovibrio yellowstonii DSM 11347	1 (0.03%)	1E-173	1-475	15-478	615	32	476	ref|YP_002248974.1|	glutamyl-tRNA(Gln) amidotransferase subunit A [Thermodesulfo...
167555	Prochlorococcus marinus str. NATL1A	1 (0.03%)	1E-169	1-471	10-472	601	32	473	ref|YP_001014756.1|	glutamyl-tRNA(Gln) amidotransferase A subunit [Prochlorococc...
423471	Crocosphaera watsonii WH 0003	1 (0.03%)	1E-165	49-476	1-421	589	32	429	ref|WP_007311091.1|	Aspartyl-tRNA(Asn) amidotransferase subunit A @ Glutamyl-tRN...
1041930	Methanocella conradii HZ254	1 (0.03%)	1E-161	9-474	6-456	575	32	467	ref|YP_005381460.1|	aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanoce...
351160	Methanocella arvoryzae MRE50	1 (0.03%)	1E-157	10-474	8-457	560	32	466	ref|YP_686842.1|	glutamyl-tRNA(Gln) amidotransferase, subunit A [Methanocella...
546269	Filifactor alocis ATCC 35896	1 (0.03%)	1E-156	1-475	15-478	557	32	476	ref|YP_005053901.1|	glutamyl-tRNA(Gln) amidotransferase subunit A [Filifactor al...
661367	Legionella longbeachae NSW150	1 (0.03%)	1E-153	1-475	13-475	546	32	476	ref|YP_003455761.1|	glutamyl-tRNA(Gln) amidotransferase subunit A [Legionella lo...