Features and Secondary Structure |
| 1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330 . 340 . 350 . 360 . 370 . 380 . 390 . 400 . 410 . 420 . 430 . 440 . 450 . 460 . 470 . 480 . 490 . 500 . 510 . 520 . 530 . 540 . 550 . 560 . 570 . 580 . 590 . 600 . 610 |
| MSFIITVIGAGHAGLEAAFIVSKFNIKVNLLVLDINHLGSCPCNPSIGGPAKGIVTREIDVLGGMQAIAADNNALQYKLLNSSKGPAVQAIRAQIDKIGYKNWFQSQVKLNKNINLIQSEAINLIVRNEKIKGVILKDGSELLSDAVIITTGTYLRSKTYCGNTVKNQGPDQSKNSEKLSTNLINRGFKTIRLKTGTPPRILKTSLDYNQMELEINNNQNLAFSTTNKNFLPLEKQIPCYLVHTNQKIHDLILKNLKKSAMFNGSISAQGPLYCPSIEDKVFKFSQKPRHQIFVEPESLSLDTIYLAGLSTSFTPEIQKEIIQLLPGFQNAEIKKFGYAIEYDAFLSNQLKPTLETKLIENLYFAGQINGTSGYEEAAGQGLMAGINAALKLLKKPPFILQRNEAYIGVMINDLVTKTISDPYRLLTSRAEYRLWLRNDNVQERLIKKSFELGLTDKKTYELFLKKEKKKQELISFLKNTQVGKVKALKFTNKNTAQSLYDFNKRSEINLDKLIKDLPEKYQLDSETLKQIEIEIKYEGYIKKNEKYFKGLDKLSKIKIPHTFDYHKVKNLASEAIFKLSNFKPSNLAIASQIAGVNFNDIIAIKHFLKTYE |
tmhmm (0) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
low complexity (6%) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXX---------------------------------------------------------XXXXXXXXXXXXXXXXX----------------------------------------------------------------- |
coiled-coils (0%) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
disordered (4%) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXX------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXX-------------------------------------------------------X-------------------------------------------------------------X |
psipred | ----EEEE---HHHHHHHHHHHH----EEEEE-----EEEE----------HHHHHHHHHH----EEEE-------HHH-----------HHHHHHHHHHHHHHHHHH-----EEEEEEEEEEEE----EEEEEE------------EE--------HHHHHHHHH-------HHHHHHHHHHHHH--HHEEE------EEE-----HHH--EE-----------------------EEHHHHH-------HHH----------------------------------EEEEEE--------EEEE--------HHHHHHHHH-------EEEE-----EEEEEE-HHH------------EEE---------HHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHH-------------------------HHH--HHHHHH----HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHH---------HHHHH------HHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHH-----HHHHHH-----HHHHHHHHHHHHHH- |
PSI-BLAST Sequence Hits (Top 20 by Identity) ALL DATA
|
TaxID |
Species |
Alignments |
PSI-Blast Data (alignment with lowest E value) |
E value |
Query Span |
Sbjct Span |
Bit Score |
Identity |
HSP Length |
Accession |
Description |
2096 | Mycoplasma gallisepticum | 1 (0.03%) | 0.0 | 6-610 | 5-609 | 716 | 56 | 606 | gb|AAF36757.1| | glucose inhibited division protein A [Mycoplasma galliseptic... |
626095 | Ureaplasma urealyticum serovar 8 str. ATCC 27618 | 1 (0.03%) | 0.0 | 2-612 | 3-612 | 757 | 53 | 611 | ref|YP_002284456.1| | tRNA uridine 5-carboxymethylaminomethyl modification enzyme ... |
626096 | Ureaplasma urealyticum serovar 2 str. ATCC 27814 | 1 (0.03%) | 0.0 | 2-612 | 3-612 | 756 | 53 | 611 | ref|WP_004027453.1| | tRNA uridine 5-carboxymethylaminomethyl modification protein... |
515609 | Ureaplasma parvum serovar 14 str. ATCC 33697 | 1 (0.03%) | 0.0 | 2-612 | 3-612 | 756 | 53 | 611 | ref|WP_006689091.1| | tRNA uridine 5-carboxymethylaminomethyl modification protein... |
519851 | Ureaplasma parvum serovar 6 str. ATCC 27818 | 1 (0.03%) | 0.0 | 2-612 | 3-612 | 754 | 53 | 611 | ref|WP_006688728.1| | tRNA uridine 5-carboxymethylaminomethyl modification protein... |
550773 | Ureaplasma urealyticum serovar 9 str. ATCC 33175 | 1 (0.03%) | 0.0 | 2-612 | 3-612 | 759 | 52 | 611 | ref|WP_004026735.1| | tRNA uridine 5-carboxymethylaminomethyl modification protein... |
59748 | Candidatus Phytoplasma australiense | 1 (0.03%) | 0.0 | 1-608 | 1-607 | 784 | 49 | 611 | ref|YP_001799227.1| | tRNA uridine 5-carboxymethylaminomethyl modification enzyme ... |
101513 | Sweet potato little leaf phytoplasma | 1 (0.03%) | 0.0 | 3-589 | 33-620 | 726 | 48 | 591 | gb|AAR88089.1| | glucose inhibited division protein A [Sweet potato little le... |
1033810 | Haloplasma contractile SSD-17B | 1 (0.03%) | 0.0 | 3-611 | 2-619 | 886 | 47 | 618 | ref|WP_008824870.1| | tRNA uridine 5-carboxymethylaminomethyl modification protein... |
665941 | Coprobacillus sp. 3_3_56FAA | 1 (0.03%) | 0.0 | 3-610 | 2-615 | 865 | 47 | 615 | ref|WP_003535126.1| | tRNA uridine 5-carboxymethylaminomethyl modification protein... |
428127 | Eubacterium dolichum DSM 3991 | 2 (0.06%) | 0.0 | 4-612 | 3-616 | 829 | 47 | 616 | ref|WP_004800721.1| | tRNA uridine 5-carboxymethylaminomethyl modification protein... |
37692 | Candidatus Phytoplasma mali | 1 (0.03%) | 0.0 | 1-611 | 1-615 | 800 | 47 | 618 | ref|YP_002004177.1| | tRNA uridine 5-carboxymethylaminomethyl modification protein... |
2133 | Spiroplasma citri | 5 (0.14%) | 0.0 | 2-612 | 3-621 | 791 | 47 | 619 | emb|CAK98511.1| | probable glucose inhibited division protein a [Spiroplasma c... |
496833 | Mycoplasma fermentans PG18 | 1 (0.03%) | 0.0 | 2-610 | 13-613 | 746 | 47 | 611 | ref|YP_007761803.1| | hypothetical protein [Mycoplasma fermentans PG18] ref|WP_015... |
428126 | Clostridium spiroforme DSM 1552 | 2 (0.06%) | 0.0 | 3-610 | 2-615 | 846 | 46 | 615 | ref|WP_004610730.1| | tRNA uridine 5-carboxymethylaminomethyl modification protein... |
45361 | Mycoplasma conjunctivae | 1 (0.03%) | 0.0 | 2-609 | 6-604 | 750 | 46 | 609 | ref|YP_002960527.1| | tRNA uridine 5-carboxymethylaminomethyl modification enzyme ... |
262719 | Mycoplasma hyopneumoniae J | 1 (0.03%) | 0.0 | 1-609 | 10-609 | 736 | 46 | 610 | sp|Q4AAU6.2|MNMG_MYCHJ | RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modifi... |
262722 | Mycoplasma hyopneumoniae 7448 | 1 (0.03%) | 0.0 | 1-609 | 10-609 | 736 | 46 | 610 | sp|Q4A909.2|MNMG_MYCH7 | RecName: Full=tRNA uridine 5-carboxymethylaminomethyl modifi... |
796606 | Bacillus methanolicus MGA3 | 1 (0.03%) | 0.0 | 2-611 | 7-621 | 962 | 45 | 617 | ref|WP_003347078.1| | tRNA uridine 5-carboxymethylaminomethyl modification protein... |
977905 | Bacillus sp. 17376 | 1 (0.03%) | 0.0 | 2-611 | 7-621 | 941 | 45 | 617 | ref|WP_023613374.1| | tRNA uridine 5-carboxymethylaminomethyl modification protein... |