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Job 88263 [SSGCID - MygeA.00232.a] [2019-01-18] [D-172-16-30-137.dhcp4.x.x] [Structure] [Complete] Glycerol kinase (MG_038) - BATCH:88256

Full Structure Predictions  
Model 1

 chemical/x-pdb  MIME type  PDB file
Model 2

 chemical/x-pdb  MIME type  PDB file
Model 3

 chemical/x-pdb  MIME type  PDB file
Model 4

 chemical/x-pdb  MIME type  PDB file
Model 5

 chemical/x-pdb  MIME type  PDB file

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Features and Secondary Structure  
 
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MDLKKQYIIALDEGTSSCRSIVFDHNLNQIAIAQNEFNTFFPNSGWVEQDPLEIWSAQLATMQSAKNKAQIKSHEVIAVGITNQRETIVLWNKENGLPVYNAIVWQDQRTAALCQKFNEDKLIQTKVKQKTGLPINPYFSATKIAWILKNVPLAKKLMEQKKLLFGTIDSWLIWKLTNGKMHVTDVSNASRTLLFDIVKMEWSKELCDLFEVPVSILPKVLSSNAYFGDIETNHWSSNAKGIVPIRAVLGDQQAALFGQLCTEPGMVKNTYGTGCFVLMNIGDKPTLSKHNLLTTVAWQLENHPPVYALEGSVFVAGAAIKWLRDALKIIYSEKESDFYAELAKENEQNLVFVPAFSGLGAPWWDASARGIILGIEASTKREHIVKASLESIAFQTNDLLNAMASDLGYKITSIKADGGIVKSNYLMQFQADIADVIVSIPKNKETTAVGVCFLAGLACGFWKDIHQLEKLTTLDKKFKSTMDPNIRKTKINSWHKAVERALKWKEID
tmhmm (0)
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (0%)
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
coiled-coils (0%)
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (3%)
XXXX---X----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXX-X-----------------XXXX
psipred
------EEEEEE-----EEEEEE-----EEEEEEEE----------EEE-HHHHHHHHHHHHHHHHHH----HHHEEEEEEE-----EEEEE----------EEE----HHHHHHHHHH---HHHHHHHHH------HHHHHHHHHHHH--HHHHHHHH---EEEE-HHHHHHHHHH---EEEEE------------------HHHHHHH---HHH---EE----EE----HHHHH--------EEEE---HHHHHHH--------EEEEE---EEEEEEE----EE------EEEEE-------EEEEHHHHHHHHHHHHHHHHHH----HHHHHHHHHHH--------EE-----------------EEEE-------HHHHHHHHHHHHHHHHHHHHHHHHHH------EEEEE------HHHHHHHHHHH--EEEE-----HHHHHHHHHHHHHH-----HHHHHHH-----EE-----HHHHHHHHHHHHHHHHHH-------

# SignalP-4.0 gram+ predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    36	    0.140
  max. Y    36	    0.175
  max. S    31	    0.417
  mean S     1-35   0.163
       D     1-35   0.170    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.170 D-cutoff=0.450 Networks=SignalP-TM


Domain Repeats Prediction     Top
  Boundary     STD (+/-)     Consensus  
------


Ginzu Domain Prediction 1       Top
Domain Span Source Reference Parent   Parent Span     Confidence     Annotations  
  1-508     alignment     3h45C_201     1-500   0.9519   TRANSFERASE


PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA       Top
TaxID Species Alignments PSI-Blast Data (alignment with lowest E value)
E value Query Span Sbjct Span Bit Score Identity HSP Length Accession Description
722438Mycoplasma pneumoniae FH1 (0.03%)1E-1731-5081-50861574508ref|YP_005881093.1|glycerol kinase [Mycoplasma pneumoniae FH] ref|WP_014574852....
708616Mycoplasma gallisepticum str. F1 (0.03%)0.01-5071-50465663508ref|YP_005880306.1|glycerol kinase [Mycoplasma gallisepticum str. F] ref|WP_014...
710127Mycoplasma gallisepticum str. R(low)1 (0.03%)0.01-5071-50465663508ref|NP_852797.2|glycerol kinase GlpK [Mycoplasma gallisepticum str. R(low)] ...
512564Mycoplasma crocodyli MP1451 (0.03%)1E-1785-5074-50763060504ref|YP_003560366.1|glycerol kinase [Mycoplasma crocodyli MP145] ref|WP_01305476...
747682Mycoplasma alligatoris A21JP21 (0.03%)1E-1781-5071-50863259508ref|WP_005683790.1|glycerol kinase [Mycoplasma alligatoris] gb|EFF41175.1| glyc...
45361Mycoplasma conjunctivae1 (0.03%)1E-1793-5071-50363458505ref|YP_002960544.1|glycerol kinase [Mycoplasma conjunctivae HRC/581] ref|WP_012...
29397Lactobacillus delbrueckii subsp. lactis2 (0.05%)1E-5545-2101-16522452166gb|AAQ07055.1|AF496369_1glycerol kinase [Lactobacillus delbrueckii subsp. lactis]
743722Sphingobacterium sp. 211 (0.03%)0.01-5081-49966951508ref|YP_004318125.1|glycerol kinase [Sphingobacterium sp. 21] ref|WP_013666175.1...
999436Treponema denticola SP321 (0.03%)0.04-5041-49566751501ref|WP_010697633.1|glycerol kinase [Treponema denticola] gb|EMB19534.1| glycero...
999434Treponema denticola OTK1 (0.03%)0.04-5051-49666651502ref|WP_002690454.1|glycerol kinase [Treponema denticola] gb|EMB24616.1| glycero...
699187Treponema denticola F04021 (0.03%)0.04-5051-49666651502ref|NP_972519.1|glycerol kinase [Treponema denticola ATCC 35405] ref|WP_0026...
999428Treponema denticola ATCC 335201 (0.03%)0.04-5051-49666651502ref|WP_010690285.1|glycerol kinase [Treponema denticola] gb|EMB41025.1| glycero...
999432Treponema denticola H-221 (0.03%)0.04-5041-49566551501ref|WP_002683380.1|glycerol kinase [Treponema denticola] gb|EMB34874.1| glycero...
999433Treponema denticola MYR-T1 (0.03%)0.04-5051-49666551502ref|WP_002688852.1|glycerol kinase [Treponema denticola] gb|EMB29850.1| glycero...
999426Treponema denticola AL-21 (0.03%)0.04-5051-49666551502ref|WP_002675005.1|glycerol kinase [Treponema denticola] gb|EMB42899.1| glycero...
999440Treponema denticola US-Trep1 (0.03%)0.04-5041-49566451501ref|WP_002675280.1|glycerol kinase [Treponema denticola] gb|EMB48059.1| glycero...
999435Treponema denticola SP231 (0.03%)0.04-5051-49666351502ref|WP_010699663.1|glycerol kinase [Treponema denticola] gb|EMB19898.1| glycero...
111823Caldanaerobacter subterraneus1 (0.03%)0.04-5071-49771850504ref|WP_022587917.1|glycerol kinase [Caldanaerobacter subterraneus] gb|ERM92050....
391606Carboxydibrachium pacificum DSM 126531 (0.03%)0.04-5071-49771650504ref|NP_623576.1|glycerol kinase [Thermoanaerobacter tengcongensis MB4] ref|W...
246194Carboxydothermus hydrogenoformans Z-29011 (0.03%)0.03-5081-50071650506ref|YP_360659.1|glycerol kinase [Carboxydothermus hydrogenoformans Z-2901] r...






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