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Features and Secondary Structure
	1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330 . 340 . 350 . 360 . 370 . 380 . 390 . 400 . 410 . 420 . 430 . 440 . 450 . 460 . 470 . 480 . 490 . 500 . 510 . 520 . 530 . 540 . 550 . 560 . 570 . 580 . 590 . 600 . 610 . 620 . 630 . 640 . 650 . 660 . 670 . 680 . 690 . 700 . 710 . 720 . 730 . 740 . 750 . 760 . 770 . 780 . 790 . 800 . 810 . 820 . 830
	MKDKFSFQKNYDFNLVSDGLYEIWNNAGFFKPKDKNNSFTAILPPPNLTGTLHIGHAFEVSITDQIMRFKKMQGFSINWIPGFDHAGIATQTKYEKIALKENQKYFDADDDKKSEMIMNWALNQSEIIKNQLKSLGVCLNWSETKFTLSEQANKIVNNCFKNLYENGFIYQAYTLVNWDTKLNTAISNIEVINKPVNQHLHYVVYKLANDSKQELIVATTRPETIFADVCLLVNPKDKRYTNFWNKLVVNPLTGKQIPVVTDSYVDIKFGTGILKCTPAHDFNDYEINTKYKFDFLSCIDSNGILNQNASKFQGLSVLQARNKIVKWLEKNKLLVKSIPLTSNVGFSERSGTVVEPMLSKQWFVDLPKLKDHLYLKKYPDFIPKRFNKQVSNWLNKLKPWCISRQLIWGHKIPVWFENNTGEIVVGEKPSKNLQNYTRSKDVLDTWFSSSLWPLICLNWEQDDSFHETELLVTGYDILFFWVLRMLFNSFFETKKLPFKTVLIHGLVRDEQNRKMSKSLNNGIDPVDLIRNYGADAVRLFLCSNHTPGDDLIFSEQKIKSAWNFLNKLWNVTKFVIQLENDQEISYDLDKLSLSETWILAKLDKVIQKITKLLDKFQLALANQILVKFVWDDFCNTFIEAIKKEPNQLKPQLFYTAKSVLSNIAILLSITVPFLSERIYQQFNNKSVMQATWPLATKIKIPKLFDLVLAAINDLRNYRKQYMLNSQQKLVVILSGKNAVDVKQYFNFSWIELKIETNKKVSFKYQIVDDTTQRLKSLQKQQAFFESEVKRSQAIVKNKSFLEKAPKEKVKSEFLKLEEYQKKLTETNQLIAKLTKAH
tmhmm (0)	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (0%)	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
coiled-coils (5%)	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXX----------------------------XXXXXXXXXXXXXXXXXXXXX-
disordered (4%)	XXXXXX-XXX---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXX-X---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXX-XXXXX---------XX---XXXX
psipred	------------HHHHHHHHHHHHHH------------EEEE-----------HHHHHHHHHHHHHHHHHH-------------------HHHHHHHHHH----HHH--HHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHH---EEE--------------------EEEEE---EEEEEEEEE-----EEEEEE-----HHHHH---------EEHH----EEEEE----EEEEEE-----------EEEE-----HHHHHHHHH------------EEEE----------HHHHHHHHHHHHHH---EE----------EE----EEEEEE----EEEE-HHHHHHHHH----EEE--HHHHHHHHHHH-----EEEEE--------EEEE----EEEEEE--------EEE----HHHHHH-----HHH------------------------HHHHHHHHHHHH-----HHHHEE--EEE----------------HHHHHHH----HHHHHHHH-------EE--HHHHHHHHHHHHHHHHHHHHHHH-----------HH--HHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH---HHEE-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----EEE-------HHHHHHHHHHHHHHHHHHHHHHHH--------EEEEEE---HHHHHHHH-HHHHHH------EEEEEE-----HHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--

# SignalP-4.0 gram- predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    58	    0.106
  max. Y     2	    0.118
  max. S    27	    0.164
  mean S     1-1    0.144
       D     1-1    0.130    0.570  NO
Name=tmp_signalp_seq	SP='NO' D=0.130 D-cutoff=0.570 Networks=SignalP-noTM

Domain Repeats Prediction
Boundary	STD (+/-)	Consensus
--	--	--

Ginzu Domain Prediction 1
Domain	Span	Source	Reference Parent	Parent Span	Confidence	Annotations
	1-837	alignment	1gaxA_201	1-862	0.9350	LIGASE/RNA

PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA
TaxID	Species	Alignments	PSI-Blast Data (alignment with lowest E value)
			E value	Query Span	Sbjct Span	Bit Score	Identity	HSP Length	Accession	Description
2097	Mycoplasma genitalium	1 (0.03%)	0.0	1-756	1-756	797	100	756	ref|WP_009885964.1|	valyl-tRNA synthetase [Mycoplasma genitalium]
708616	Mycoplasma gallisepticum str. F	1 (0.03%)	0.0	1-834	1-860	686	42	867	ref|YP_005880514.1|	valyl-tRNA synthetase [Mycoplasma gallisepticum str. F] ref|...
710128	Mycoplasma gallisepticum str. R(high)	1 (0.03%)	0.0	1-834	1-860	683	42	867	ref|NP_853350.2|	valyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]...
665937	Anaerostipes sp. 3_2_56FAA	1 (0.03%)	0.0	5-673	3-689	885	39	688	ref|WP_009290705.1|	valyl-tRNA synthase [Anaerostipes sp. 3_2_56FAA] gb|EFV21516...
59748	Candidatus Phytoplasma australiense	2 (0.05%)	0.0	7-826	1-850	782	39	854	ref|YP_001798820.1|	valyl-tRNA synthetase [Candidatus Phytoplasma australiense] ...
428126	Clostridium spiroforme DSM 1552	2 (0.05%)	0.0	4-833	7-878	945	38	873	ref|WP_004608648.1|	valyl-tRNA synthase [[Clostridium] spiroforme] gb|EDS75069.1...
441768	Acholeplasma laidlawii PG-8A	2 (0.05%)	0.0	4-832	2-857	888	38	861	ref|YP_001620535.1|	valyl-tRNA synthetase [Acholeplasma laidlawii PG-8A] ref|WP_...
766747	synthetic Mycoplasma mycoides JCVI-syn1.0	1 (0.03%)	0.0	4-834	2-870	799	38	870	gb|ACU78278.1|	valine--tRNA ligase [Mycoplasma mycoides subsp. capri str. G...
515608	Ureaplasma parvum serovar 1 str. ATCC 27813	1 (0.03%)	0.0	4-835	2-871	765	38	871	ref|WP_006689237.1|	valyl-tRNA synthetase [Ureaplasma parvum] gb|EDT48954.1| val...
626096	Ureaplasma urealyticum serovar 2 str. ATCC 27814	1 (0.03%)	0.0	4-835	2-871	764	38	871	ref|WP_004027285.1|	valyl-tRNA synthetase [Ureaplasma urealyticum] gb|EEH01883.1...
526347	Ureaplasma urealyticum serovar 11 str. ATCC 33695	1 (0.03%)	0.0	4-835	2-871	764	38	871	ref|WP_004027032.1|	valyl-tRNA synthetase [Ureaplasma urealyticum] gb|EDU66818.1...
626095	Ureaplasma urealyticum serovar 8 str. ATCC 27618	1 (0.03%)	0.0	4-835	2-871	764	38	871	ref|YP_002284667.1|	valyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str...
997296	Bacillus methanolicus PB1	1 (0.03%)	0.0	2-834	3-879	1044	37	878	ref|WP_004438371.1|	valyl-tRNA synthase [Bacillus methanolicus] gb|EIJ79058.1| v...
1131731	Bacillus azotoformans LMG 9581	1 (0.03%)	0.0	1-834	1-880	1040	37	881	ref|WP_003331842.1|	valyl-tRNA synthetase [Bacillus azotoformans] gb|EKN64999.1|...
941639	Bacillus coagulans 2-6	1 (0.03%)	0.0	2-834	3-879	1037	37	878	ref|YP_004569323.1|	valyl-tRNA synthetase [Bacillus coagulans 2-6] ref|WP_013859...
51173	Ureibacillus thermosphaericus	1 (0.03%)	0.0	1-835	1-880	1037	37	881	ref|WP_016838424.1|	valyl-tRNA synthase [Ureibacillus thermosphaericus]
1121864	Enterococcus cecorum DSM 20682 = ATCC 43198	1 (0.03%)	0.0	1-835	1-877	1032	37	880	ref|WP_016251701.1|	valyl-tRNA synthetase [Enterococcus cecorum] gb|EOX17645.1| ...
33018	Sporolactobacillus laevolacticus	1 (0.03%)	0.0	5-834	3-876	1026	37	875	ref|WP_023508592.1|	valyl-tRNA synthase [Sporolactobacillus laevolacticus] gb|ES...
526990	Bacillus cereus AH603	2 (0.05%)	0.0	15-835	2-867	1023	37	867	ref|WP_002067378.1|	valyl-tRNA synthase [Bacillus cereus] gb|EEL68811.1| Valyl-t...
526997	Bacillus mycoides DSM 2048	1 (0.03%)	0.0	15-835	2-867	1022	37	867	ref|WP_002034166.1|	valyl-tRNA synthase [Bacillus cereus group] gb|EEL04212.1| V...