| Features and Secondary Structure |
| | 1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330 . 340 . 350 . 360 . 370 . 380 . 390 . 400 . 410 . 420 . 430 . 440 . 450 . 460 . 470 . 480 . 490 . 500 . 510 . 520 . 530 . 540 . 550 . 560 . 570 . 580 . 590 . 600 |
| | MVNKSNSLDELLKQIKITEIIQHYGVKIQTKGNSLLALCPFHDDKNPSMSISSSKNIFKCWACNAAGNGIAFIQKHDQLDWKTALKKAIEICGIKLENWNSNLLTKVDPKQKRYWEINNALITYYQTRLKRETNPNGMNYLVEKRKLNKTLIEQFQLGLAFHNEDKYLCESMERYPFINPKIKPSELYLFSKTNQQGLGFFDFNTKKATFQNQIMIPIHDFNGNPVGFSARSVDNINKLKYKNSADHEFFKKGELLFNFHRLNKNLNQLFIVEGYFDVFTLTNSKFEAVALMGLALNDVQIKAIKAHFKELQTLVLALDNDASGQNAVFSLIEKLNNNNFIVEIVQWEHNYKDWDELYLNKGSEQVILQANKRQNLIEYLVSFFKKQQLDQRVITNKIIAFLTKNQTILNDHSFLIFLIKNLVKLLEYSDEKTLYETVLKHKEKLVSKFDNNRFYINTSGHAQPPQELQKTTAALVQTAFEEAVNELWKPEIFAFALIDKRFLVELKQSHLDEVFKECNFNLFDVELFIEKARIYWSENQTANWVGFESVLDQNYLLNNKARLLEIKDIFLDELTCYQANDFQNYLKTFQTLLKQQKQRLKNLKLTL |
| tmhmm (0) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| low complexity (4%) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXX |
| coiled-coils (3%) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXX- |
| disordered (13%) | X--------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXX------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXX------- |
| psipred | ----HHHHHHHHH---HHHHHHH----EEE---EEEEE----------EEEE-----EE-----------HHHHHHHHHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHHHH------HHHH--------HHHHHHHH----HHHHHHHHHHHHH-----HHHHHH-------------------------EEEEEEEEEE-----EEEEEEEEE-------EE-----------HHHHHHHHHHHH---EEEE--HHHHHHHHH----EEE------HHHHHHHHHHH-----EEEEEE----HHHHHHHHHHHHHHH---EEEEEE-------HHHHHHH--HHHHHHHHH----HHHHHHHHH-------HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH-------------------------HHHHHHHHHHHHHHHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--- |
PSI-BLAST Sequence Hits (Top 20 by Identity) ALL DATA
 |
| TaxID |
Species |
Alignments |
PSI-Blast Data (alignment with lowest E value) |
| E value |
Query Span |
Sbjct Span |
Bit Score |
Identity |
HSP Length |
Accession |
Description |
| 662947 | Mycoplasma genitalium M2288 | 1 (0.03%) | 1E-131 | 1-607 | 1-607 | 476 | 100 | 607 | ref|NP_072915.1| | DNA primase [Mycoplasma genitalium G37] ref|YP_006599788.1| ... |
| 1112856 | Mycoplasma pneumoniae 309 | 1 (0.03%) | 1E-104 | 2-604 | 1-615 | 384 | 46 | 617 | ref|YP_005175592.1| | DNA primase [Mycoplasma pneumoniae 309] ref|YP_005881371.1| ... |
| 454165 | Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480 | 1 (0.03%) | 3E-14 | 15-78 | 2-66 | 88 | 32 | 66 | ref|WP_001530407.1| | DNA primase [Salmonella enterica] gb|EDY29689.1| DNA primase... |
| 632245 | Clostridium butyricum E4 str. BoNT E BL5262 | 1 (0.03%) | 4E-9 | 12-106 | 4-100 | 70 | 26 | 100 | ref|WP_003409155.1| | DNA primase [Clostridium butyricum] gb|EDT75119.1| CHC2 zinc... |
| 1327779 | Mycobacterium phage Methuselah | 1 (0.03%) | 1E-8 | 17-110 | 7-103 | 69 | 26 | 98 | ref|NP_817647.1| | gp58 [Mycobacterium phage Bxz2] ref|YP_008126299.1| DNA prim... |
| 518637 | Eubacterium biforme DSM 3989 | 1 (0.03%) | 2E-85 | 3-429 | 4-416 | 323 | 25 | 433 | ref|WP_003864957.1| | hypothetical protein, partial [[Eubacterium] biforme] gb|EEC... |
| 422288 | Beggiatoa sp. SS | 1 (0.03%) | 5E-45 | 2-163 | 4-161 | 189 | 25 | 162 | gb|EDN72379.1| | DNA Primase [Beggiatoa sp. SS] |
| 35772 | Peanut witches'-broom phytoplasma | 1 (0.03%) | 5E-8 | 243-395 | 4-156 | 67 | 25 | 160 | gb|AAP44297.1| | putative DNA primase [Peanut witches'-broom phytoplasma] |
| 904296 | Oribacterium sp. oral taxon 108 str. F0425 | 1 (0.03%) | 1E-110 | 1-464 | 1-447 | 404 | 24 | 468 | ref|WP_009427746.1| | DNA polymerase III [Oribacterium sp. oral taxon 108] gb|EGL3... |
| 536231 | Roseburia intestinalis L1-82 | 1 (0.03%) | 1E-100 | 2-338 | 20-342 | 371 | 24 | 340 | ref|WP_006859181.1| | DNA primase [Roseburia intestinalis] gb|EEU99023.1| DNA prim... |
| 553220 | Campylobacter gracilis RM3268 | 1 (0.03%) | 1E-89 | 2-429 | 1-405 | 337 | 24 | 433 | ref|WP_005871478.1| | DNA primase [Campylobacter gracilis] gb|EEV17448.1| DNA prim... |
| 391597 | Limnobacter sp. MED105 | 2 (0.06%) | 2E-74 | 2-282 | 1-264 | 286 | 24 | 285 | ref|WP_008251941.1| | DNA primase [Limnobacter sp. MED105] gb|EDM82553.1| DNA prim... |
| 29397 | Lactobacillus delbrueckii subsp. lactis | 1 (0.03%) | 3E-52 | 117-358 | 13-245 | 213 | 24 | 248 | gb|AAQ07012.1|AF496332_1 | DNA primase [Lactobacillus delbrueckii subsp. lactis] |
| 657318 | Eubacterium rectale DSM 17629 | 1 (0.03%) | 1E-19 | 5-154 | 3-152 | 105 | 24 | 156 | ref|YP_007772053.1| | DNA primase (bacterial type) [Eubacterium rectale DSM 17629]... |
| 10760 | Enterobacteria phage T7 | 6 (0.17%) | 3E-13 | 219-377 | 112-261 | 84 | 24 | 163 | gb|AAP34085.1| | gene 4A [Enterobacteria phage T7] gb|AAP34138.1| gene 4A [En... |
| 532077 | Klebsiella phage K11 | 2 (0.06%) | 4E-11 | 219-377 | 120-269 | 77 | 24 | 163 | ref|YP_002003806.1| | gp4A [Klebsiella phage K11] gb|ACF15850.1| gp4A [Klebsiella ... |
| 376758 | Propionibacterium phage PA6 | 1 (0.03%) | 1E-6 | 20-113 | 18-111 | 62 | 24 | 94 | ref|YP_001285608.1| | gp32 [Propionibacterium phage PA6] gb|ABE68601.1| gp32 [Prop... |
| 365044 | Polaromonas naphthalenivorans CJ2 | 1 (0.03%) | 1E-5 | 269-368 | 227-333 | 59 | 24 | 110 | ref|YP_983538.1| | phage-like protein [Polaromonas naphthalenivorans CJ2] ref|W... |
| 470146 | Coprococcus comes ATCC 27758 | 4 (0.12%) | 1E-129 | 1-464 | 1-450 | 469 | 23 | 468 | ref|WP_008374886.1| | DNA primase [Coprococcus comes] gb|EEG89378.1| DNA primase [... |
| 1125778 | Clostridiales bacterium OBRC5-5 | 1 (0.03%) | 1E-120 | 1-607 | 1-578 | 438 | 23 | 610 | ref|WP_007591693.1| | DNA primase [Clostridiales bacterium OBRC5-5] gb|EJZ70745.1|... |
