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Features and Secondary Structure
	1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330 . 340 . 350 . 360 . 370 . 380 . 390 . 400 . 410
	MINTFTYFEPEYLIDKNLIFLYFDFDAFFASVEELENPELVNQPLIVGNRFSRSVVSTCNYVARSYGIRSGMSILKALELCPNAIFAHSNFRNYRKHSKRIFSVIESTFSLKIDVLSVDEGVACFQNISFKKAFLIAKKIKNFVFQNLRIKISIGISDHFLIAKIFSNQAKPFGIKSCSVKDIKKKLWPLPITEIPGIGEKHIDLVFKNNFYKINDLAVCEDASLLKKVFGNFWESLKAVSLGKWYTDNNNQVKSRSFAVSETLEDLNYSNNQLNKKLTQIFDQLFIRLQLSSQVCKGIVVQLKSNDFIVNSHSNKMKKYSNDYRKLLSITKRLFNRLLINTEKNVRLIGISFFDLKKIDTDEGQKKSLFYQFIPKSISKLSEESSLDKLIFDINESFGFEIIKRANKLKS
tmhmm (0)	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (7%)	---------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXX------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXX--------------------
coiled-coils (0%)	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (1%)	XXX---X------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XX
psipred	------------------EEEEEE--HHHHHHHHHH-------EEEEE------EEE-------EEEEE---------------EEE---HHHHHHHHHHHHHHHHHH---EEEE----------------HHHHHHHHHHHHHHHH---------------HHHHHHHH-----EEE-------------EEEHH---HHHHHHHHHHHHHHHHHHH---HHHHHHHHH--HHHHHHHHH---------------EEEEEE--------HHHHHHHHHHHHHHHHHHHHHH---EEEEEEEEEE---------EE-------HHHHHHHHHHHHHHHHH-----EEEEEEEE------------------------HHHHHHHHHHHHHHHHHHHHH--HHHHHHH----

# SignalP-4.0 gram- predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    33	    0.136
  max. Y    33	    0.147
  max. S    21	    0.201
  mean S     1-32   0.145
       D     1-32   0.146    0.570  NO
Name=tmp_signalp_seq	SP='NO' D=0.146 D-cutoff=0.570 Networks=SignalP-noTM

Domain Repeats Prediction
Boundary	STD (+/-)	Consensus
--	--	--

Ginzu Domain Prediction 1
Domain	Span	Source	Reference Parent	Parent Span	Confidence	Annotations
	1-411	alignment	3pzpA_201	1-440	0.756300	TRANSFERASE/DNA

PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA
TaxID	Species	Alignments	PSI-Blast Data (alignment with lowest E value)
			E value	Query Span	Sbjct Span	Bit Score	Identity	HSP Length	Accession	Description
2133	Spiroplasma citri	3 (0.08%)	5E-22	18-103	2-87	112	35	86	emb|CAK99126.1|	putative dna polymerase iv c-terminal truncated protein [Spi...
386415	Clostridium novyi NT	1 (0.03%)	5E-84	17-272	6-258	318	34	256	ref|YP_878523.1|	ImpB/MucB/SamB family protein [Clostridium novyi NT] ref|WP_...
406558	Streptococcus pneumoniae SP9-BS68	2 (0.05%)	8E-29	5-111	1-111	134	34	111	ref|WP_001810291.1|	DNA polymerase IV, partial [Streptococcus pneumoniae] gb|EDK...
525282	Finegoldia magna ATCC 53516	1 (0.03%)	2E-91	20-363	26-364	343	33	344	ref|WP_002835633.1|	DNA polymerase IV [Finegoldia magna] gb|EFH93177.1| ImpB/Muc...
334413	Finegoldia magna ATCC 29328	1 (0.03%)	5E-90	20-363	5-343	337	33	344	ref|YP_001691585.1|	DNA polymerase IV [Finegoldia magna ATCC 29328] ref|WP_01229...
266834	Sinorhizobium meliloti 1021	1 (0.03%)	7E-39	25-159	1-136	168	33	137	ref|YP_002000349.1|	hypothetical protein SMa5005 [Sinorhizobium meliloti 1021] r...
5141	Neurospora crassa	1 (0.03%)	3E-18	24-128	49-152	100	32	107	emb|CAD70389.1|	related to DNA Polymerase iota (POLI) [Neurospora crassa]
561177	Anaerococcus hydrogenalis DSM 7454	2 (0.05%)	6E-96	19-371	3-346	357	31	353	ref|WP_004814118.1|	DNA polymerase IV [Anaerococcus hydrogenalis] gb|EEB36073.1|...
272629	Mannheimia haemolytica PHL213	1 (0.03%)	5E-80	17-249	8-241	305	31	236	ref|WP_006249625.1|	DNA-directed DNA polymerase IV, partial [Mannheimia haemolyt...
863	Syntrophomonas wolfei	1 (0.03%)	1E-114	20-411	7-389	420	30	395	ref|YP_754040.1|	DNA-directed DNA polymerase [Syntrophomonas wolfei subsp. wo...
1046950	unclassified candidate division KSB1	1 (0.03%)	1E-113	18-369	8-359	414	30	355	ref|WP_020251684.1|	hypothetical protein [unclassified candidate division KSB1]
391603	Flavobacteriales bacterium ALC-1	2 (0.05%)	1E-111	18-356	8-344	409	30	341	ref|WP_008269806.1|	DNA polymerase IV [Flavobacteriales bacterium ALC-1] gb|EDP7...
688270	Cellulophaga algicola DSM 14237	1 (0.03%)	1E-110	18-356	8-344	404	30	341	ref|YP_004164084.1|	DNA polymerase iv [Cellulophaga algicola DSM 14237] ref|WP_0...
641107	Clostridium sp. DL-VIII	1 (0.03%)	1E-107	20-370	5-348	394	30	351	ref|WP_009172097.1|	DNA polymerase IV [Clostridium sp. DL-VIII] gb|EHJ01457.1| D...
638301	Granulicatella adiacens ATCC 49175	1 (0.03%)	1E-107	18-370	2-352	394	30	356	ref|WP_005605219.1|	DNA polymerase IV [Granulicatella adiacens] gb|EEW37998.1| p...
445337	Clostridium botulinum C str. Eklund	1 (0.03%)	1E-106	17-370	2-347	392	30	354	ref|WP_003367712.1|	DNA polymerase IV [Clostridium botulinum] gb|EDS76517.1| DNA...
997898	Clostridium butyricum 60E.3	1 (0.03%)	1E-104	20-370	5-348	384	30	351	ref|WP_002581970.1|	DNA polymerase IV [Clostridium butyricum] gb|EDT75293.1| DNA...
572479	Halanaerobium praevalens DSM 2228	1 (0.03%)	1E-104	20-409	6-383	384	30	394	ref|YP_005836023.1|	DNA-directed DNA polymerase [Halanaerobium praevalens DSM 22...
655811	Anaerococcus vaginalis ATCC 51170	1 (0.03%)	5E-98	19-371	3-346	364	30	353	ref|WP_004838384.1|	DNA polymerase IV [Anaerococcus vaginalis] gb|EEU13203.1| Im...
442346	Francisella novicida GA99-3548	1 (0.03%)	4E-97	14-370	1-349	361	30	360	ref|WP_003036634.1|	DNA polymerase IV [Francisella novicida] gb|EDN37766.1| hypo...