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Click the icons below each image to download the prediction in PDB format ( )

Features and Secondary Structure
	1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330 . 340 . 350 . 360 . 370 . 380 . 390 . 400 . 410 . 420 . 430 . 440 . 450 . 460 . 470 . 480 . 490 . 500 . 510 . 520 . 530 . 540 .
	MCFNQRILIGSISTEQLNKTIVIIGWIKRIKKLGEINFIIVGDKSGTIQVTCKDKEQIQQLTREDIVIVKAKLQRLDSVRFELINPTIKLFSKSKTPPLIIEDETDALEEVRLKYRYLDLRRRLMQKRLLLRHQFILAIRNWFNQQGFIEIETPTLSKSTPEGAQDFLVPARIRKDCFYALVQSPQIYKQLLMIAGVEKYFQIARVYRDEDSRKDRQPEHTQIDFEISFCNQKMIMNLVEKLFFSVFLDVFQIKIKKTFPVFKFSELFERFGSDKPDLRYGFEIKDFTSLFQDHQNQFTKLIEAKGIIGGIELTNIELSTDKIKALRKIAKDHDVSLEVHNKNNSTLKTSIKCDEKNTLLLVANKSKKKAWTALGAIRNELKYHLDIVKPNQYSFCWVVDFPLYDFDEKTNQWISNHNIFSKPKQEWIDNFESNKNEALSEQFDLVLNGFEIGSGSIRINDPIVQKRLMNSLNIDPNKFAFLLEAYQYGAPVHGGMGLGIDRLMMILNQTDNIREVIAFPKNNHGIEVHTNAPDKIDKEEVKWWIKELVK
tmhmm (0)	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (4%)	---------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXX----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
coiled-coils (0%)	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (0%)	XX--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
psipred	-----EEEHH---HHH---EEEEEEEEHHH------EEEEEEE---EEEEEE--HHHH-------EEEEEEEEEE-----EEEEEEEEEEEE----------------HHHHH--HHH----HHHHHHHHHHHHHHHHHHHHHHH---EEEE----------------EEEE------HHHHHHHHHHHHHHHH----EEEEEEEEEE--------------EEEEE----HHHHHHHHHHHHHHHHHHH-------------HHHHHHH------EEE----------HH----HHHHHHHHH------EE-------HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHH--HHH---------------HHHHHHHHH-------EEEEEEEE----EE-------------EE------HHHHH----HHHHHHHHHHH--EEE---HHH---HHHHHHHHHH----HHHHHHHHHHHH--------EEEHHHHHHHHH-----HHHEE--------------------HHHHHHH--EEE-

# SignalP-4.0 euk predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    21	    0.110
  max. Y     4	    0.124
  max. S     1	    0.149
  mean S     1-3    0.147
       D     1-3    0.136    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.136 D-cutoff=0.450 Networks=SignalP-noTM

Domain Repeats Prediction
Boundary	STD (+/-)	Consensus
--	--	--

Ginzu Domain Prediction 1
Domain	Span	Source	Reference Parent	Parent Span	Confidence	Annotations
	1-550	alignment	1l0wA_202	1-580	0.9211	LIGASE

PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA
TaxID	Species	Alignments	PSI-Blast Data (alignment with lowest E value)
			E value	Query Span	Sbjct Span	Bit Score	Identity	HSP Length	Accession	Description
663918	Mycoplasma genitalium M2321	1 (0.03%)	1E-170	1-550	7-556	606	100	550	ref|YP_006599552.1|	aspartyl-tRNA synthetase [Mycoplasma genitalium M2321] ref|W...
29397	Lactobacillus delbrueckii subsp. lactis	1 (0.03%)	4E-49	82-220	2-140	203	58	139	gb|AAQ07219.1|AF496527_1	aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp. l...
367791	Flammeovirga yaeyamensis	1 (0.03%)	8E-79	5-226	3-239	301	40	237	gb|ACA05124.1|	aspartyl-tRNA synthetase, partial [Flammeovirga yaeyamensis]
0	UNIDENTIFIED	200 (5.0%)	0.0	4-549	2-584	724	38	584	ref|WP_019120096.1|	aspartyl-tRNA synthase [Brevibacillus massiliensis]
580340	Thermovirga lienii DSM 17291	1 (0.03%)	0.0	3-537	10-582	648	38	573	ref|YP_004933266.1|	aspartyl-tRNA synthetase [Thermovirga lienii DSM 17291] ref|...
2133	Spiroplasma citri	3 (0.08%)	1E-178	4-549	2-577	632	38	577	emb|CAK99000.1|	probable aspartyl-trna synthetase protein [Spiroplasma citri...
626096	Ureaplasma urealyticum serovar 2 str. ATCC 27814	1 (0.03%)	1E-160	6-549	2-576	573	38	578	ref|YP_002284687.1|	aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 ...
589861	Thermoanaerobacter ethanolicus CCSD1	1 (0.03%)	1E-149	125-548	1-446	534	38	447	ref|WP_003868848.1|	aspartyl-tRNA synthetase [Thermoanaerobacter ethanolicus] gb...
491075	Enterococcus faecalis EnGen0297	2 (0.05%)	3E-99	4-272	3-286	369	38	284	ref|WP_002387296.1|	possible aspartyl-tRNA synthetase, partial [Enterococcus fae...
111823	Caldanaerobacter subterraneus	1 (0.03%)	0.0	3-548	8-590	714	37	584	ref|WP_022587796.1|	aspartyl-tRNA synthetase [Caldanaerobacter subterraneus] gb|...
583358	Thermoanaerobacter mathranii subsp. mathranii str. A3	1 (0.03%)	0.0	3-548	8-590	709	37	584	ref|YP_003676817.1|	aspartyl-tRNA synthetase [Thermoanaerobacter mathranii subsp...
580331	Thermoanaerobacter italicus Ab9	1 (0.03%)	0.0	3-548	8-590	709	37	584	ref|YP_003476862.1|	aspartyl-tRNA synthetase [Thermoanaerobacter italicus Ab9] r...
1118154	Brevibacillus laterosporus GI-9	1 (0.03%)	0.0	1-550	1-588	708	37	589	ref|WP_003338331.1|	aspartyl-tRNA synthase [Brevibacillus laterosporus] gb|EGP32...
573062	Thermoanaerobacter sp. X513	2 (0.05%)	0.0	3-548	8-590	703	37	584	ref|YP_001663096.1|	aspartyl-tRNA synthetase [Thermoanaerobacter sp. X514] ref|Y...
411471	Subdoligranulum variabile DSM 15176	1 (0.03%)	0.0	3-549	7-590	673	37	584	ref|WP_007046013.1|	aspartyl-tRNA synthase [Subdoligranulum variabile] gb|EFB769...
545696	Holdemania filiformis DSM 12042	1 (0.03%)	0.0	4-550	2-580	671	37	581	ref|WP_006058741.1|	aspartyl-tRNA synthetase [Holdemania filiformis] gb|EEF68259...
891968	Anaerobaculum mobile DSM 13181	1 (0.03%)	0.0	3-549	10-591	669	37	582	ref|YP_006444550.1|	aspartyl-tRNA synthetase [Anaerobaculum mobile DSM 13181] re...
309799	Dictyoglomus thermophilum H-6-12	1 (0.03%)	0.0	4-549	2-583	659	37	583	ref|YP_002250688.1|	aspartyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12] ...
656519	Halanaerobium hydrogeniformans	1 (0.03%)	0.0	3-549	8-590	656	37	585	ref|YP_003995414.1|	aspartyl-tRNA synthetase [Halanaerobium hydrogeniformans] re...
743525	Thermus scotoductus SA-01	1 (0.03%)	0.0	4-549	2-578	642	37	583	ref|YP_004202706.1|	aspartyl-tRNA synthetase [Thermus scotoductus SA-01] ref|WP_...