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Features and Secondary Structure
	1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330 . 340 . 350 . 360 . 370 . 380 . 390 . 400 . 410 . 420 . 430 . 440 . 450 . 460 . 470 . 480 . 490 . 500 . 510 . 520 . 530 . 540 . 550 . 560 . 570 . 580 . 590 . 600 . 610 . 620 . 630 . 640 . 650 . 660 . 670 . 680 . 690 . 700
	MNEQQKQAISCGKGVNVVYSGAGTGKTTIITNRFAYLVNKEKVDPSRILAITFTKKAAKEMQFRILKLIDSSLAEKTNIYTFHSFCNKFLIQTLKKRFIIDDDISYFLKEFLADSKLDINLAKQIIDNFKNTFADFEINKLDQDERLISLCEHSLLNKDEEYSTLKTQLINAFISYEKNKILNNKLDFHDLLIKTCNLLSNDNDLLNQWSEQFQHILVDEFQDTNQIQYELIKMLVTKNKNLFLVGDNNQMIYRWRGAVNGIITALKHDFNVPKSNEFFINQNYRCDQNILAVANQILLKIMAYEKQVKTEKNLLFSTLNSDKKPVYFQAESVENQANWIFNKIKALNQTEKINFKDMAILFRKNRDITTMVELIEADGTIPLPKQKSYFNQLVKLQRVLIAISTRTNLDIKRALQALKIWSNDLKELWKQSDKTNLFDFLKWSELNQKNHSSKLKATGYFNLLIKLAEDQQINLLFTELFKKLKVDQTIENLLWKKLTEFQKDKTEFSLSEFITSLALEFDSIIENSSDTINLLTVHAAKGLEFEAVFIYGMNQGDFPLFLSQNQNDEQHLIDELKLFYVAITRAKRFLFITAVLQINNNSIKPSSFLNYINKSEYLDIATINYVLEQDDDFFDSTKKTDYTKKLRKESLDIIVGDLVTSRYFGKGVVVEVRDKEVLVAFKDTRYGMKWILKNHKSLTKALY
tmhmm (0)	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (6%)	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXX--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXX-------------------XXXXXXXXXXXXXXX------------------------
coiled-coils (0%)	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (11%)	XXXX-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXX-XXXX---------------------------------XXXX------------------------------------------------------------------------------------------------X-X--------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXX--------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------------
psipred	--HHHHHHH------EEEEE-----HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHH-HHHHHHHHHH--EEEEEEHH----HHHHHHHHHH------EEE----EEE--------HHHHHHHHH-------EEE--------HHHHHHHHHHHHH------HHH-------HH------EEEEE---HHHHHHHHHHHHHHHHHH----HHHEEEEE--HHHHHHHHHHHHHH----------HHHHHHHHHHHHHHH-----HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH------HHHHHHHHHH------EEEEE-----------------HHHHHHHHHHHHEEE--HHHEEEEEEE------------------HHHHHHHHH-----------------------------------EE--------EEEEEE--EEEEEE-----EEEEEE------EEE--

# SignalP-4.0 gram+ predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    51	    0.123
  max. Y     9	    0.153
  max. S     2	    0.269
  mean S     1-8    0.215
       D     1-8    0.177    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.177 D-cutoff=0.450 Networks=SignalP-TM

Domain Repeats Prediction
Boundary	STD (+/-)	Consensus
--	--	--

Ginzu Domain Prediction 1
Domain	Span	Source	Reference Parent	Parent Span	Confidence	Annotations
	1-703	alignment	1w36B_208	1-1158	0.7001	RECOMBINATION

PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA
TaxID	Species	Alignments	PSI-Blast Data (alignment with lowest E value)
			E value	Query Span	Sbjct Span	Bit Score	Identity	HSP Length	Accession	Description
662947	Mycoplasma genitalium M2288	1 (0.03%)	1E-168	1-703	1-703	600	100	703	ref|NP_072909.1|	UvrD/REP helicase [Mycoplasma genitalium G37] ref|YP_0065997...
2097	Mycoplasma genitalium	1 (0.03%)	1E-148	1-634	1-634	531	100	634	ref|WP_009885780.1|	ATPase AAA [Mycoplasma genitalium]
1238993	Mycoplasma pneumoniae M129-B7	1 (0.03%)	1E-135	1-703	9-715	489	52	707	ref|NP_110029.1|	DNA helicase II [Mycoplasma pneumoniae M129] ref|YP_00517558...
29397	Lactobacillus delbrueckii subsp. lactis	1 (0.03%)	3E-37	157-301	6-148	163	32	145	gb|AAQ07163.1|AF496472_1	ATP-dependent helicase PcrA [Lactobacillus delbrueckii subsp...
59923	Prochlorococcus marinus subsp. pastoris str. NATL2	1 (0.03%)	6E-48	1-253	12-304	199	31	297	emb|CAB86224.1|	putative DNA helicase [Prochlorococcus marinus subsp. pastor...
908338	Peptoniphilus harei ACS-146-V-Sch2b	1 (0.03%)	1E-153	1-699	6-731	548	29	747	ref|WP_005956551.1|	ATP-dependent DNA helicase PcrA [Peptoniphilus harei] gb|EFR...
345076	Vibrio cholerae V52	1 (0.03%)	2E-82	1-367	3-354	314	29	367	ref|WP_000773963.1|	acriflavin resistance protein [Vibrio cholerae] gb|EAX60345....
9606	Homo sapiens	1 (0.03%)	4E-47	510-700	15-224	196	29	214	emb|CAA66919.1|	X-1 [Homo sapiens]
471223	Geobacillus sp. WCH70	1 (0.03%)	0.0	1-700	12-731	683	28	739	ref|YP_002948465.1|	ATP-dependent DNA helicase PcrA [Geobacillus sp. WCH70] ref|...
411490	Anaerostipes caccae DSM 14662	3 (0.08%)	1E-169	1-700	7-731	604	28	745	ref|WP_006568953.1|	ATP-dependent DNA helicase PcrA [Anaerostipes caccae] gb|EDR...
665937	Anaerostipes sp. 3_2_56FAA	1 (0.03%)	1E-169	1-700	7-731	603	28	745	ref|WP_009290440.1|	ATP-dependent DNA helicase PcrA [Anaerostipes] gb|EFV21846.1...
562982	Gemella morbillorum M424	1 (0.03%)	1E-160	1-700	7-726	570	28	739	ref|WP_004631973.1|	ATP-dependent helicase [Gemella morbillorum] gb|EFV36120.1| ...
562981	Gemella haemolysans M341	1 (0.03%)	1E-158	1-700	7-726	567	28	739	ref|WP_003146070.1|	ATP-dependent helicase [Gemella haemolysans] gb|EGF87358.1| ...
546270	Gemella haemolysans ATCC 10379	1 (0.03%)	1E-157	1-700	7-725	564	28	740	ref|WP_003145685.1|	ATP-dependent helicase [Gemella haemolysans] gb|EER68132.1| ...
562983	Gemella sanguinis M325	1 (0.03%)	1E-156	1-700	7-726	558	28	739	ref|WP_006365034.1|	ATP-dependent helicase [Gemella sanguinis] gb|EGF85915.1| AT...
436114	Sulfurihydrogenibium sp. YO3AOP1	1 (0.03%)	1E-149	1-697	10-704	535	28	720	ref|YP_001930440.1|	UvrD/REP helicase [Sulfurihydrogenibium sp. YO3AOP1] ref|WP_...
766747	synthetic Mycoplasma mycoides JCVI-syn1.0	1 (0.03%)	1E-134	1-700	10-721	486	28	735	gb|ACU78749.1|	UvrD/REP helicase domain protein [Mycoplasma mycoides subsp....
445987	Borrelia valaisiana VS116	2 (0.05%)	1E-122	1-630	10-658	445	28	676	ref|WP_006068598.1|	ATPase AAA [Borrelia valaisiana] gb|EEF81790.1| ATP-dependen...
83333	Escherichia coli K-12	1 (0.03%)	1E-63	1-257	10-258	252	28	257	emb|CAA25043.1|	unnamed protein product [Escherichia coli K-12]
1136178	Geobacillus thermoglucosidans TNO-09.020	1 (0.03%)	0.0	1-700	9-726	670	27	739	ref|WP_003253305.1|	ATP-dependent DNA helicase PcrA [Geobacillus thermoglucosida...