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Job 88326 [SSGCID - MygeA.19982.a] [2019-01-18] [D-172-16-30-137.dhcp4.x.x] [Structure] [Complete] Ribonuclease P protein component (MG_465) - BATCH:88256

Full Structure Predictions  
Model 1

 chemical/x-pdb  MIME type  PDB file
Model 2

 chemical/x-pdb  MIME type  PDB file
Model 3

 chemical/x-pdb  MIME type  PDB file
Model 4

 chemical/x-pdb  MIME type  PDB file
Model 5

 chemical/x-pdb  MIME type  PDB file

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Features and Secondary Structure  
 
1   .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .
 
MLNSRFPVSVKKSHSLRERKVFTTILQSKTRFFGTFINAYFIKNNHSTWRVAISIAKTKYKLAVQRNLIKRQIRSIFQQISNNLEPWDILVIVNKGFIELTFKEKQKLFLQLLKRIKEVDAYQTSANK
tmhmm (0)
--------------------------------------------------------------------------------------------------------------------------------
low complexity (13%)
--------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXX--------------
coiled-coils (0%)
--------------------------------------------------------------------------------------------------------------------------------
disordered (19%)
XXXXXXXXXXX--------------------------------------------------------------------------------------------------------XXXXXXXXXXXXX
psipred
-----------HHH----HHHHHHHHH---EEE---EEEEEE-------EEEEEEE--------HHHHHHHHHHHHHHHHHHH----EEEEEE--------HHHHHHHHHHHHHHHHHH---------

# SignalP-4.0 gram+ predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    40	    0.124
  max. Y    13	    0.252
  max. S     7	    0.722
  mean S     1-12   0.607
       D     1-12   0.391    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.391 D-cutoff=0.450 Networks=SignalP-TM


Domain Repeats Prediction     Top
  Boundary     STD (+/-)     Consensus  
------


Ginzu Domain Prediction 1       Top
Domain Span Source Reference Parent   Parent Span     Confidence     Annotations  
  1-128     alignment     2ljpA_202     1-119   0.8568   HYDROLASE


PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA       Top
TaxID Species Alignments PSI-Blast Data (alignment with lowest E value)
E value Query Span Sbjct Span Bit Score Identity HSP Length Accession Description
488339synthetic Mycoplasma genitalium JCVI-1.01 (0.04%)3E-241-1281-128116100128ref|NP_073135.1|ribonuclease P protein component [Mycoplasma genitalium G37]...
662947Mycoplasma genitalium M22881 (0.04%)3E-228-1281-12111099121ref|YP_006600011.1|ribonuclease P protein component [Mycoplasma genitalium M232...
1001585Pseudomonas mendocina NK-011 (0.04%)6E-1655-1182-65894564ref|YP_004382740.1|ribonuclease P, partial [Pseudomonas mendocina NK-01] ref|WP...
388919Streptococcus sanguinis SK361 (0.04%)4E-1842-1182-77973577ref|YP_001036057.1|ribonuclease P protein component [Streptococcus sanguinis SK...
1069628Streptococcus pneumoniae GA088251 (0.04%)3E-1738-1281-91943592ref|WP_001842744.1|ribonuclease P [Streptococcus pneumoniae] gb|EIA04083.1| rib...
1131630Streptococcus pneumoniae GA623311 (0.04%)2E-1738-1281-91943592ref|WP_001859630.1|ribonuclease P [Streptococcus pneumoniae] gb|EJH15086.1| rib...
760750Streptococcus pneumoniae GA060831 (0.04%)5E-1738-1281-91933592ref|WP_001841218.1|ribonuclease P [Streptococcus pneumoniae] gb|EHZ07958.1| rib...
1161416Streptococcus sp. SR11 (0.04%)8E-2810-1281-11912834120gb|EUC79504.1|ribonuclease P protein component [Streptococcus sp. SR1]
996285Pseudomonas stutzeri DSM 41661 (0.04%)1E-2434-1273-961183494ref|YP_005940965.1|ribonuclease P [Pseudomonas stutzeri DSM 4166] ref|WP_014598...
675812Grimontia hollisae CIP 1018861 (0.04%)9E-1256-1232-69753468ref|WP_005500792.1|ribonuclease P [Grimontia hollisae] gb|EEY74192.1| ribonucle...
1048830Mycoplasma iowae 6951 (0.04%)1E-1116-1172-1037534102ref|WP_004024633.1|ribonuclease P protein component [Mycoplasma iowae] gb|EGZ31...
936580Streptococcus sp. CM61 (0.04%)1E-2810-1281-11913133120ref|WP_000748118.1|ribonuclease P [Streptococcus oralis] gb|EGV02852.1| ribonuc...
1282664Streptococcus tigurinus AZ_3a1 (0.04%)4E-2810-1281-11913033120ref|YP_004325221.1|ribonuclease P [Streptococcus oralis Uo5] ref|WP_000748120.1...
862971Streptococcus anginosus C2381 (0.04%)5E-2810-1171-10712933108ref|YP_008501586.1|ribonuclease P [Streptococcus anginosus C238] ref|WP_0030264...
28037Streptococcus mitis1 (0.04%)9E-2710-1281-11912533120ref|WP_023947950.1|ribonuclease P [Streptococcus mitis] gb|ETD97741.1| ribonucl...
718251Edwardsiella tarda FL6-601 (0.04%)2E-1544-1152-73883372ref|YP_003297594.1|RNase P protein component, partial [Edwardsiella tarda EIB20...
998088Aeromonas veronii B5651 (0.04%)1E-1156-1182-64753363ref|YP_004394677.1|ribonuclease P protein component, partial [Aeromonas veronii...
360104Campylobacter concisus 138261 (0.04%)3E-461-1092-50503349ref|YP_001466645.1|hypothetical protein CCC13826_1621 [Campylobacter concisus 1...
699248Streptococcus ratti FA-1 = DSM 205641 (0.04%)8E-3110-1281-11813832119ref|WP_003089566.1|ribonuclease P [Streptococcus ratti] gb|EJN94506.1| ribonucl...
1076934Streptococcus lutetiensis 0331 (0.04%)3E-3010-1281-11813632119ref|YP_008357143.1|ribonuclease P [Streptococcus lutetiensis 033] ref|WP_020917...






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