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Features and Secondary Structure
	1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330
	MQTFIITSPVFNPYFNAALEEWLLTEFRKNELVKVIYFWQNANTIVVGRNQNTYAEVNLKELESDKVNLFRRFSGGGAVFHDLGNICFSIILPRTGKVMENAYEQTTRNVVKFLNSLNVPAVFHGRNDLEINNKKFSGLAEYIAKDRLLVHGTLLFDTDFSKLAKYLNVDKTKIASKGVDSVAKRVVNVKEYLPNWTTAKFLEEMINFFTVTEKAETIVLTKDALAKVEKRAKEHFQSWEWNFGKTYEYNFKNKRYFNNAGLFECNVQVEKGTVVDIKFYGDFLSVVDITPVTKKLIGQKYDYKTFEKLFNELDHFSDYFGSLKPEQLLGVIFDNK
tmhmm (0)	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (0%)	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
coiled-coils (0%)	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (1%)	X----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------X
psipred	-EEEEE------HHHHHHHHHHHHHH--------EEEEEE--------------HHHHHHHHHH----EEEE-----EEEE----EEEEEEE-----HHHHHHHHHHHHHHHHHHH---EEEE-----EEE---EEEEEEEEEE--EEEEEEEEE----HHHHHHHHHH-HHHHHH------HH-----HHH-----HHHHHHHHHHHHHH-----------HHHHHHHHHHHHHH----EE----------EEEEE----EEEEEEEE---EEEEEEEE-----HHHHHHHHHHH------HHHHHHHHHH---HHHHH----HHHHHHHHH---

# SignalP-4.0 gram- predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    18	    0.156
  max. Y    18	    0.167
  max. S     1	    0.271
  mean S     1-17   0.192
       D     1-17   0.179    0.570  NO
Name=tmp_signalp_seq	SP='NO' D=0.179 D-cutoff=0.570 Networks=SignalP-noTM

Domain Repeats Prediction
Boundary	STD (+/-)	Consensus
--	--	--

Ginzu Domain Prediction 1
Domain	Span	Source	Reference Parent	Parent Span	Confidence	Annotations
	1-336	alignment	4tvwA_302	1-337	0.9668	--

PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA
TaxID	Species	Alignments	PSI-Blast Data (alignment with lowest E value)
			E value	Query Span	Sbjct Span	Bit Score	Identity	HSP Length	Accession	Description
488339	synthetic Mycoplasma genitalium JCVI-1.0	1 (0.03%)	1E-106	1-336	1-336	391	100	336	ref|NP_072937.1|	lipoyltransferase/lipoate-protein ligase, [Mycoplasma genita...
662946	Mycoplasma genitalium M6282	1 (0.03%)	1E-106	1-336	1-336	392	99	336	ref|YP_006599812.1|	lipoyltransferase/lipoate-protein ligase [Mycoplasma genital...
662947	Mycoplasma genitalium M2288	1 (0.03%)	1E-106	1-336	1-336	392	99	336	ref|YP_006601308.1|	lipoyltransferase/lipoate-protein ligase [Mycoplasma genital...
662945	Mycoplasma genitalium M6320	1 (0.03%)	1E-106	1-336	1-336	390	99	336	ref|YP_006600804.1|	lipoyltransferase/lipoate-protein ligase [Mycoplasma genital...
1238993	Mycoplasma pneumoniae M129-B7	1 (0.03%)	1E-103	1-336	1-336	382	76	336	ref|NP_110077.1|	lipoate protein ligase [Mycoplasma pneumoniae M129] ref|YP_0...
722438	Mycoplasma pneumoniae FH	1 (0.03%)	1E-102	1-336	1-336	379	75	336	ref|YP_005881401.1|	lipoyltransferase and lipoate-protein ligase [Mycoplasma pne...
1112856	Mycoplasma pneumoniae 309	1 (0.03%)	1E-102	1-336	1-336	378	75	336	ref|YP_005175630.1|	lipoate protein ligase [Mycoplasma pneumoniae 309] ref|WP_01...
1006581	Mycoplasma gallisepticum S6	1 (0.03%)	4E-86	2-336	1-331	324	46	336	ref|YP_008894406.1|	lipoate--protein ligase [Mycoplasma gallisepticum S6] ref|WP...
708616	Mycoplasma gallisepticum str. F	1 (0.03%)	9E-86	2-336	1-331	323	46	336	ref|NP_853263.1|	lipoate-protein ligase A [Mycoplasma gallisepticum str. R(lo...
1159204	Mycoplasma gallisepticum NC08_2008.031-4-3P	1 (0.03%)	4E-87	2-336	1-331	328	45	336	ref|YP_006581364.1|	Lipoate-protein ligase A [Mycoplasma gallisepticum VA94_7994...
766146	Shigella flexneri K-218	1 (0.03%)	1E-62	3-203	4-202	246	41	205	ref|WP_005059840.1|	lipoate--protein ligase [Shigella flexneri] gb|EGJ79323.1| l...
766161	Shigella flexneri 6603-63	1 (0.03%)	9E-63	3-203	4-202	246	41	205	ref|WP_005053740.1|	lipoate--protein ligase [Shigella flexneri] gb|EFS10718.1| l...
1198630	Thermoanaerobacter thermohydrosulfuricus WC1	1 (0.03%)	1E-107	3-333	1-326	394	40	333	ref|WP_004400227.1|	lipoyltransferase and lipoate-protein ligase [Thermoanaeroba...
913071	Salmonella enterica subsp. enterica serovar Gaminara str. A4-567	1 (0.03%)	1E-66	3-214	4-213	259	40	216	gb|EHC29902.1|	Lipoate-protein ligase A, partial [Salmonella enterica subsp...
913069	Salmonella enterica subsp. enterica serovar Baildon str. R6-199	1 (0.03%)	1E-66	3-214	4-213	259	40	216	ref|WP_001595869.1|	lipoate--protein ligase [Salmonella enterica] gb|EHJ84790.1|...
586220	Leuconostoc mesenteroides subsp. cremoris ATCC 19254	1 (0.03%)	3E-54	46-243	2-199	218	40	199	ref|WP_004164251.1|	possible lipoate-protein ligase [Leuconostoc mesenteroides] ...
573062	Thermoanaerobacter sp. X513	2 (0.07%)	1E-107	3-333	1-326	395	39	333	ref|YP_001661887.1|	lipoyltransferase and lipoate-protein ligase [Thermoanaeroba...
880478	Thermoanaerobacter siderophilus SR4	1 (0.03%)	1E-107	3-333	1-326	394	39	333	ref|WP_003870814.1|	lipoate-protein ligase A [Thermoanaerobacter] gb|EGD51162.1|...
1125974	Thermoanaerobacter indiensis	1 (0.03%)	1E-107	3-333	1-326	394	39	333	ref|WP_019907266.1|	lipoate-protein ligase A [Thermoanaerobacter indiensis]
697303	Thermoanaerobacter wiegelii Rt8.B1	1 (0.03%)	1E-107	3-333	1-326	394	39	333	ref|YP_004819080.1|	lipoyltransferase and lipoate-protein ligase [Thermoanaeroba...