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Job 88334 [SSGCID - MygeA.20015.a] [2019-01-18] [D-172-16-30-137.dhcp4.x.x] [Structure] [Complete] Processive diacylglycerol beta-glycosyltransferase (MG_517) - BATCH:88256

Full Structure Predictions  
Model 1

 chemical/x-pdb  MIME type  PDB file
Model 2

 chemical/x-pdb  MIME type  PDB file
Model 3

 chemical/x-pdb  MIME type  PDB file
Model 4

 chemical/x-pdb  MIME type  PDB file
Model 5

 chemical/x-pdb  MIME type  PDB file

Click the icons below each image to download the prediction in PDB format ( PDB file )

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Features and Secondary Structure  
 
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MDKLVSILVPCYKSKPFLKRFFNSLLKQDLNQAKIIFFNDNVADETYEVLQKFKKEHNNLAIEVYCDKQNEGIGKVRDKLVNLVTTPYFYFIDPDDCFNNKNVIKEIVESIKKEDFDLGVLKSMVYLCFLKHDFIIKFLPLKGIFQGRVKLINNNNVNKLNYIKNNDQYIWNIVINTDFFRKLNLTFESRLFEDIPIWYPMFFSSQKIVFIDVIGTNYFIRNDSLSTTISAPRYLNLIQCYEKLYVNLSQNGSLASFIDPNHKIEARFWRRQMFVWFALFSFEYFKKNFSESKKILEKLFVFLEKNGVYERVFQTKNQGIYYIWVQRLKYFKHVLESKSDN
tmhmm (0)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (5%)
----------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXX-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
coiled-coils (0%)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (1%)
X-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXX
psipred
----EEEEE-----HHHHHHHHHHHHH-----EEEEEEE------HHHHHHHHHHH----EEEEEE------HHHHHHHHHHH----EEEEE----------HHHHHHHHHH-----EEEE--EEEEE--------------------HHH---HHHHHHHHH-------EEEEEEHHHHHH-----------HHHHHHHHHHH--EEEEE---EEEEEE----------HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---

# SignalP-4.0 gram+ predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    34	    0.113
  max. Y    15	    0.191
  max. S     9	    0.492
  mean S     1-14   0.354
       D     1-14   0.255    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.255 D-cutoff=0.450 Networks=SignalP-TM


Domain Repeats Prediction     Top
  Boundary     STD (+/-)     Consensus  
------


Ginzu Domain Prediction 1       Top
Domain Span Source Reference Parent   Parent Span     Confidence     Annotations  
  1-341     alignment     6hnqA_303     1-317   0.5225   --


PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA       Top
TaxID Species Alignments PSI-Blast Data (alignment with lowest E value)
E value Query Span Sbjct Span Bit Score Identity HSP Length Accession Description
662947Mycoplasma genitalium M22881 (0.03%)3E-581-3411-341232100341ref|YP_006600872.1|glycosyl transferase family protein [Mycoplasma genitalium M...
663918Mycoplasma genitalium M23211 (0.03%)2E-581-3411-341232100341ref|NP_073005.1|glycosyl transferase, group 2 family protein [Mycoplasma gen...
662946Mycoplasma genitalium M62821 (0.03%)2E-5117-3417-33120999325ref|YP_006600368.1|glycosyl transferase family protein [Mycoplasma genitalium M...
2097Mycoplasma genitalium1 (0.03%)2E-491-3231-32320295323ref|WP_009885967.1|glycosyl transferase family A [Mycoplasma genitalium]
1238993Mycoplasma pneumoniae M129-B71 (0.03%)3E-551-3381-33822256338ref|NP_110171.1|bifunctional threonine dehydrogenase/galactosyltransferase [...
1390Bacillus amyloliquefaciens4 (0.1%)2E-503-2534-24720523252ref|YP_001422720.1|hypothetical protein RBAM_031580 [Bacillus amyloliquefaciens...
491077Lactobacillus reuteri SD21122 (0.05%)3E-355-2348-23115523230ref|YP_004648609.1|glycosyl transferase CpsJ(V) [Lactobacillus reuteri SD2112] ...
1034836Bacillus amyloliquefaciens XH72 (0.05%)9E-521-2531-24721022255ref|YP_005543127.1|glycosyl transferase EpsJ [Bacillus amyloliquefaciens TA208]...
1126211Bacillus amyloliquefaciens Y22 (0.05%)5E-513-2534-24720822252ref|YP_005422669.1|glycosyl transferase EpsJ [Bacillus amyloliquefaciens subsp....
1001582Bacillus amyloliquefaciens LL31 (0.03%)2E-501-2531-24720622255ref|YP_003921876.1|glycosyl transferase EpsJ [Bacillus amyloliquefaciens DSM 7]...
883098Bergeyella zoohelcum CCUG 305362 (0.05%)2E-484-3353-31919922337ref|WP_002686768.1|glycosyl transferase family 2 [Bergeyella zoohelcum] gb|EKB6...
1226334Lactobacillus helveticus CIRM-BIA 9511 (0.03%)6E-364-3006-28915822298ref|WP_023191254.1|Ss-1,4-galactosyltransferase [Lactobacillus helveticus] emb|...
575593Lachnospiraceae oral taxon 107 str. F01672 (0.05%)2E-345-2806-26515322276ref|WP_009221080.1|hypothetical protein [Lachnospiraceae oral taxon 107] gb|EGG...
742816Megamonas funiformis YIT 118153 (0.08%)4E-344-3371-32715222337ref|WP_008539627.1|hypothetical protein [Megamonas funiformis] gb|EHR34195.1| h...
936578Streptococcus sp. AS201 (0.03%)9E-345-3277-30215022324ref|WP_003068638.1|glycosyl transferase [Streptococcus intermedius] gb|EHG14893...
936575Streptococcus sp. AC152 (0.05%)3E-332-3123-28614822312ref|WP_003027705.1|glycosyl transferase [Streptococcus anginosus] gb|EFU23255.1...
904306Streptococcus vestibularis F03962 (0.05%)7E-332-2593-24014722261ref|WP_003093774.1|glycosyl transferase [Streptococcus vestibularis] gb|EFQ5906...
396513Staphylococcus carnosus subsp. carnosus TM3001 (0.03%)2E-312-3403-32714322347ref|YP_002635273.1|hypothetical protein Sca_2183 [Staphylococcus carnosus subsp...
488221Streptococcus pneumoniae 705851 (0.03%)2E-261-1231-11912622123ref|YP_002741035.1|putative glycosyltransferase YibD [Streptococcus pneumoniae ...
1200984Streptomyces lividans 13263 (0.08%)4E-513-2542-24520821252ref|WP_003975828.1|glycosyl transferase [Streptomyces lividans] gb|EFD68915.1| ...






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