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Features and Secondary Structure
	1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330 . 340 . 350 . 360 . 370 . 380 . 390 . 400
	MEDSVLYSFYFWTYMQPNYYRVIKKATSFSGLEMISHAYGQIAGVEVVGFYLWLITEANIQAFNSEIRTPISRLQNAFNPFEIKKNQVSEWIYKTISKLESLGLVRTFFSPKRSEITFCIIDPLDWKEFKQNKQLKEKLVEAMGKVEYDRNCLAFDQIDNLQFDNALEISANFEVNFTANQSDVWFSFNFEELHKELVKNKLLISLDEKAKTLINGYFEKYKLSLQQITDCIINSSTQENELDFQKLEMMFFQIVKNDTAPILETVSNNKDFFYKNEILDESTKKAITDCHVNFNSEKYLFLLYGKIDESQLQLVRQLRSDYQLLDKVINLVLDFSFWKNNGMWREKYILKIAQSIKINNSQNSYEKTLNNFIRALTLNKKHSLNNIKPVEKTISFTEYFEFIK
tmhmm (0)	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (0%)	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
coiled-coils (0%)	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (16%)	XX---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXX---------
psipred	----HHHHHHHHHH-----EEEEE-------HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHH--HHHHHHHHHHHHHHHHH---HHHHHH----EEEEEEE----HHHHH--HHHHHHHHHHH-HHHHHHHHHHH-----------EE----HHHH-------------HHHHHHHHHH----HH--HHHHHHHHHHHHH----HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH-----HHHHH--HHH---------HHHHHHHHHHHH--HHHHHHHHH----HHHHHHHHHHHHH----HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH-----------HHHHHH---

# SignalP-4.0 gram+ predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    39	    0.123
  max. Y    39	    0.140
  max. S    34	    0.190
  mean S     1-38   0.102
       D     1-38   0.125    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.125 D-cutoff=0.450 Networks=SignalP-TM

Domain Repeats Prediction
Boundary	STD (+/-)	Consensus
--	--	--

Ginzu Domain Prediction 1
Domain	Span	Source	Reference Parent	Parent Span	Confidence	Annotations
	1-272	alignment	5wtnA_201	1-268	0.858800	--
	273-404	alignment	2zc2A_301	1-75	0.262300	REPLICATION

PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA
TaxID	Species	Alignments	PSI-Blast Data (alignment with lowest E value)
			E value	Query Span	Sbjct Span	Bit Score	Identity	HSP Length	Accession	Description
488339	synthetic Mycoplasma genitalium JCVI-1.0	1 (0.08%)	2E-78	1-404	1-404	299	100	404	ref|NP_073019.1|	hypothetical protein MG_349 [Mycoplasma genitalium G37] ref|...
663918	Mycoplasma genitalium M2321	1 (0.08%)	1E-71	15-404	1-390	276	100	390	ref|YP_006599899.1|	hypothetical protein CM9_02085 [Mycoplasma genitalium M2321]...
2097	Mycoplasma genitalium	1 (0.08%)	2E-71	15-404	1-390	276	100	390	ref|WP_009885807.1|	hypothetical protein [Mycoplasma genitalium]
662947	Mycoplasma genitalium M2288	1 (0.08%)	4E-70	15-404	1-389	272	99	390	ref|YP_006600384.1|	hypothetical protein CM3_02200 [Mycoplasma genitalium M6282]...
1238993	Mycoplasma pneumoniae M129-B7	1 (0.08%)	1E-60	15-387	1-372	240	64	373	ref|NP_110213.1|	hypothetical protein MPN525 [Mycoplasma pneumoniae M129] ref...
1112856	Mycoplasma pneumoniae 309	1 (0.08%)	2E-60	15-387	1-372	239	64	373	ref|YP_005175766.1|	putative replication initiation/membrane attachment protein ...
1276220	Spiroplasma taiwanense CT-1	1 (0.08%)	7E-50	18-401	5-394	204	23	406	ref|YP_008311841.1|	chromosome replication initiation and membrane attachment pr...
1048830	Mycoplasma iowae 695	1 (0.08%)	2E-34	13-370	3-357	153	23	364	ref|WP_004024653.1|	hypothetical protein [Mycoplasma iowae] gb|EGZ31576.1| hypot...
1276258	Spiroplasma apis B31	1 (0.08%)	6E-43	18-383	5-377	181	22	389	ref|YP_008868999.1|	chromosome replication initiation and membrane attachment pr...
2110	Mycoplasma agalactiae	1 (0.08%)	1E-11	17-186	8-169	78	22	170	ref|YP_003515917.1|	hypothetical protein MAGa7610 [Mycoplasma agalactiae] ref|WP...
1276221	Spiroplasma diminutum CUAS-1	1 (0.08%)	6E-51	18-398	5-399	208	21	408	ref|YP_008292805.1|	chromosome replication initiation and membrane attachment pr...
626095	Ureaplasma urealyticum serovar 8 str. ATCC 27618	1 (0.08%)	8E-34	21-401	3-375	151	21	389	ref|YP_002284706.1|	hypothetical protein UUR10_0312 [Ureaplasma urealyticum sero...
626096	Ureaplasma urealyticum serovar 2 str. ATCC 27814	1 (0.08%)	1E-33	21-401	3-375	150	21	389	ref|WP_004027424.1|	hypothetical protein [Ureaplasma urealyticum] gb|EEH02223.1|...
1131454	Mycoplasma canis UFG1	1 (0.08%)	6E-18	19-195	10-179	99	21	178	ref|WP_004796814.1|	hypothetical protein [Mycoplasma canis] gb|EIE41672.1| hypot...
1117644	Mycoplasma canis PG 14	1 (0.08%)	6E-18	19-195	10-179	99	21	178	ref|WP_004795039.1|	hypothetical protein [Mycoplasma canis] gb|EIE39890.1| hypot...
1131455	Mycoplasma canis UFG4	1 (0.08%)	1E-17	19-195	10-179	98	21	178	ref|WP_004795895.1|	hypothetical protein [Mycoplasma canis] gb|EIE40105.1| hypot...
943945	Mycoplasma fermentans M64	1 (0.08%)	1E-17	19-206	10-189	98	21	188	ref|YP_004136466.1|	hypothetical protein MfeM64YM_0079 [Mycoplasma fermentans M6...
637387	Mycoplasma fermentans JER	1 (0.08%)	2E-17	19-206	10-189	97	21	188	ref|YP_003922586.1|	hypothetical protein MFE_00810 [Mycoplasma fermentans JER] r...
1188233	Mycoplasma auris 15026	1 (0.08%)	6E-15	17-258	2-244	89	21	256	ref|WP_004423134.1|	Hypothetical protein [Mycoplasma auris] gb|ENY69344.1| Hypot...
1037410	Mycoplasma columbinum SF7	1 (0.08%)	4E-13	17-198	8-174	83	21	182	ref|WP_006608880.1|	hypothetical protein [Mycoplasma columbinum] gb|EGV00267.1| ...