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Job 88359 [SSGCID - MygeA.20114.a] [2019-01-18] [D-172-16-30-137.dhcp4.x.x] [Structure] [Complete] tRNA (guanine-N(7)-)-methyltransferase (MG_347) - BATCH:88256

Full Structure Predictions  
Model 1

 chemical/x-pdb  MIME type  PDB file
Model 2

 chemical/x-pdb  MIME type  PDB file
Model 3

 chemical/x-pdb  MIME type  PDB file
Model 4

 chemical/x-pdb  MIME type  PDB file
Model 5

 chemical/x-pdb  MIME type  PDB file

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Features and Secondary Structure  
 
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MRLRKVKNALLKINQSPYFYSKDKFAKFTKKQLVLELGCGKGTFLIKEAQKNNNFLFIGIEREPTIVLKAINKINKLDFNLENILLLCTDAKQLDDYFQAESVQKIFINFPDPWPKKRHIQRRLTSPDFLKLFWNLLVKNGLIEFKTDNDKLFEYTLTTLQENSQIFEIIHQITDLNNSEFSFQNSITEYEQRFMELEIPIKKLVIKKII
tmhmm (0)
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low complexity (6%)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXX
coiled-coils (0%)
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disordered (0%)
X-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
psipred
----------HHHHH------HHHHHH-----EEEEE-----HHHHHHHHH-----EEEEE--HHHHHHHHHHHHHHH----EEEEEE--HHHHHH-----EEEEEEEE-------HHHHHHH---HHHHHHHHHH-----EEEEE---HHHHHHHHHHHHH--HHHHH-------------------HHHHHHHH-----EEEEEEE--

# SignalP-4.0 gram+ predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    22	    0.123
  max. Y     3	    0.207
  max. S     2	    0.441
  mean S     1-2    0.437
       D     1-2    0.297    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.297 D-cutoff=0.450 Networks=SignalP-TM


Domain Repeats Prediction     Top
  Boundary     STD (+/-)     Consensus  
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Ginzu Domain Prediction 1       Top
Domain Span Source Reference Parent   Parent Span     Confidence     Annotations  
  1-210     alignment     2vdvF_306     1-216   0.9024   TRANSFERASE


PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA       Top
TaxID Species Alignments PSI-Blast Data (alignment with lowest E value)
E value Query Span Sbjct Span Bit Score Identity HSP Length Accession Description
662947Mycoplasma genitalium M22881 (0.03%)2E-631-2101-210248100210ref|NP_073017.1|tRNA (guanine-N(7)-)-methyltransferase [Mycoplasma genitaliu...
1238993Mycoplasma pneumoniae M129-B71 (0.03%)3E-591-2091-20923456209ref|NP_110210.1|methyltransferase [Mycoplasma pneumoniae M129] ref|YP_007348...
1112856Mycoplasma pneumoniae 3091 (0.03%)2E-591-2091-20923456209ref|YP_005175763.1|tRNA (guanine-N(7)-)-methyltransferase [Mycoplasma pneumonia...
29397Lactobacillus delbrueckii subsp. lactis1 (0.03%)2E-1284-1451-62795262gb|AAQ06825.1|AF496164_1hypothetical protein [Lactobacillus delbrueckii subsp. lacti...
742737Clostridium hathewayi WAL-186801 (0.03%)1E-681-2081-21126441215ref|WP_006778171.1|tRNA (guanine-N(7)-)-methyltransferase [Clostridium hatheway...
838561Spiroplasma mirum ATCC 293351 (0.03%)5E-621-2081-21324341217gb|AHF61511.1|tRNA (guanine-N7-)-methyltransferase [Spiroplasma mirum ATCC...
2107Mycoplasma pulmonis1 (0.03%)5E-491-2061-19920041206ref|NP_325997.1|tRNA (guanine-N(7))-methyltransferase [Mycoplasma pulmonis U...
596315Peptostreptococcus stomatis DSM 176781 (0.03%)6E-4923-20696-27319941184ref|WP_007789405.1|tRNA (guanine-N(7)-)-methyltransferase [Peptostreptococcus s...
717608Clostridium cf. saccharolyticum K101 (0.03%)9E-691-2081-21126540215ref|YP_007848038.1|tRNA (guanine-N(7)-)-methyltransferase [Clostridium cf. sacc...
411486Clostridium sp. M62/11 (0.03%)2E-681-2083-21326440215ref|WP_008397707.1|tRNA (guanine-N(7)-)-methyltransferase [Clostridium sp. M62/...
411472Clostridium symbiosum ATCC 149401 (0.03%)2E-661-2081-21125740215ref|WP_003503880.1|tRNA (guanine-N(7)-)-methyltransferase [Clostridium] gb|EGA9...
278197Pediococcus pentosaceus ATCC 257451 (0.03%)1E-641-2061-21025240214ref|YP_804185.1|tRNA (guanine-N(7)-)-methyltransferase [Pediococcus pentosac...
1229281Pediococcus lolii NGRI 0510Q1 (0.03%)2E-641-2061-21025140214ref|WP_002831357.1|tRNA (guanine-N(7)-)-methyltransferase [Pediococcus] gb|EFA2...
1306952Pediococcus acidilactici D31 (0.03%)2E-641-2061-21025140214ref|WP_005916478.1|tRNA (guanine-N(7)-)-methyltransferase, trmB [Pediococcus ac...
1133596Pediococcus pentosaceus IE-31 (0.03%)4E-641-2061-21025040214ref|WP_002833782.1|tRNA (guanine-N(7)-)-methyltransferase [Pediococcus pentosac...
428126Clostridium spiroforme DSM 15521 (0.03%)2E-621-2051-21024440213ref|WP_004609748.1|tRNA (guanine-N(7)-)-methyltransferase [[Clostridium] spirof...
701521Pediococcus claussenii ATCC BAA-3441 (0.03%)2E-621-2091-21324440217ref|YP_005005087.1|tRNA (guanine-N(7)-)-methyltransferase [Pediococcus claussen...
796945Oribacterium sp. ACB81 (0.03%)3E-611-2081-21824140220ref|WP_009533952.1|tRNA (guanine-N(7)-)-methyltransferase [Oribacterium] gb|EHL...
525318Lactobacillus buchneri ATCC 115771 (0.03%)1E-572-20635-24222840213ref|WP_003560767.1|tRNA (guanine-N(7)-)-methyltransferase [Lactobacillus buchne...
525327Lactobacillus hilgardii ATCC 82901 (0.03%)2E-572-20620-22722840213ref|WP_004561631.1|tRNA (guanine-N(7)-)-methyltransferase [Lactobacillus hilgar...






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