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Job 88370 [SSGCID - MygeA.20147.a] [2019-01-18] [D-172-16-30-137.dhcp4.x.x] [Structure] [Complete] Uncharacterized protein MG350 (MG_350) - BATCH:88256

Features and Secondary Structure

1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310

MKISPDQKDKKSLFKKHFAYLKLTEKELNDPKIQTLLEVAWNHFDQCRKIKERRCSNKGDIHLQAVREWLPWEFNANQLKKNSTKETTQVSENEFMGNVMLMQTICPKLVNKANWFDLTYERFIVTKPNWFKYMDLIPMIQNLPVTPSDKNSFGYAYKKISNLFETEKKTKKRIFFFNLQKNNINNMAACMLTCEIAKKNIKVALIYCEEFVSRYDKSYWKVDDDLNLLDEAKVIIFIGLGQESFHNKNYILFMTRLFINCFLKRKDVFFFSTTYSDGNGLIQTFKNQIISSANWVKHFFEQLNDLLMINI

tmhmm (0)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

low complexity (0%)
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coiled-coils (0%)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

disordered (12%)
XXXXXXXXXXXXX-------------------------------------XXXXXXX--------------------XXXXXXXXXXXXXXXX--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

psipred
---------HHHHHHHHHHHH---HHHH--HHHHHHHHHHHHHHHHHHHHHH--------HHHHHH---------HHHH---------EE-HHHHHHHHHHHHHH-HHH--HHHHHH--HHEEEEE---HHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHH-EEEEEEE------HHHHHHHHHHHH---EEEEEEHHHHHHHHHHHH-----HHHHH----EEEEEE--HHHH----EEEEHHHHHHHHH-----EEEEEEEE-----HHHHHHHHHHHHHHHHHHHHHHHHHHH----

# SignalP-4.0 gram+ predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    13	    0.102
  max. Y     9	    0.160
  max. S     2	    0.308
  mean S     1-8    0.257
       D     1-8    0.198    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.198 D-cutoff=0.450 Networks=SignalP-TM

Domain Repeats Prediction

Boundary STD (+/-) Consensus

-- -- --

Ginzu Domain Prediction 1

Domain Span Source Reference Parent Parent Span Confidence Annotations

1-144 alignment 4uf1A_301 1-135 0.186900 --

145-311 alignment 2w58B_101 1-188 0.779900 HYDROLASE

Ginzu Domain Prediction 2

Domain Span Source Reference Parent Parent Span Confidence Annotations

1-144 msa 4uf1A_301 1-135 0.186900 --

145-311 alignment 2w58B_101 1-188 0.779900 HYDROLASE

PSI-BLAST Sequence Hits (Top 20 by Identity) ALL DATA

TaxID Species Alignments PSI-Blast Data (alignment with lowest E value)

E value Query Span Sbjct Span Bit Score Identity HSP Length Accession Description

662947 Mycoplasma genitalium M2288 1 (33.33%) 1E-138 1-311 1-311 496 100 311 ref|NP_073020.1| hypothetical protein MG_350 [Mycoplasma genitalium G37] ref|...

2097 Mycoplasma genitalium 1 (33.33%) 2E-24 92-159 2-69 119 99 68 gb|AAC43209.1| unknown, partial [Mycoplasma genitalium]

1238993 Mycoplasma pneumoniae M129-B7 1 (33.33%) 1E-109 14-304 43-317 400 47 291 ref|NP_110214.1| hypothetical protein MPN526 [Mycoplasma pneumoniae M129] ref...