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Job 88374 [SSGCID - MygeA.20161.a] [2019-01-18] [D-172-16-30-137.dhcp4.x.x] [Structure] [Complete] Uncharacterized protein MG011 (MG_011) - BATCH:88256

Full Structure Predictions  
Model 1

 chemical/x-pdb  MIME type  PDB file
Model 2

 chemical/x-pdb  MIME type  PDB file
Model 3

 chemical/x-pdb  MIME type  PDB file
Model 4

 chemical/x-pdb  MIME type  PDB file
Model 5

 chemical/x-pdb  MIME type  PDB file

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Features and Secondary Structure  
 
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MGKIKLKNRKALVVYDNKDDFEKNQTFALSLIKELQKKKLNAEVLLLENKDINFEAKINEAELILNRSRKVDFLKTNNQINTFLVNPFNVVFIANDKYETYKWLKQNRFLTVNSSLLSKETIKSFPVIVKKRNSHGGKDVHLVNSADEIKHLNIENATEWIVQPFLSIGTVEYRAYILFGKIIKVIKKISNANQFKANFSQGAEVSLFKLKWFTKRKIKKIAKRLREGYYAIDFFLNRYNRVIVNEIEDAAGARALVQLCPDLNITKIIIRTIISKFKKFLKKKLIS
tmhmm (0)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (14%)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXX---------------------------------------XXXXXXXXXXXXXXXXXXXXXXX
coiled-coils (0%)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (5%)
XXXXXX----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXX
psipred
----EE---EEEEEE-----HH--HHHHHHHHHHHHH----EEEEE----------------EEEE----HHHHHHHHH---EEE--HHHHHHHH-HHHHHHHHHH-------EEEE-HHHH----EEEEE------EEEEEE--HHHHHHHHHH----EEEEEEE-----EEEEEEE--EEEEEEEEE------EEEE----EEEEE---HHHHHHHHHHHHHH---EEEEEEEEE----EEEEEEE-----HHHHHHH----HHHHHHHHHHHHHHHHHH-----

# SignalP-4.0 gram+ predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    43	    0.107
  max. Y     1	    0.160
  max. S     1	    0.260
  mean S     1-0    0.000
       D     1-0    0.098    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.098 D-cutoff=0.450 Networks=SignalP-TM


Domain Repeats Prediction     Top
  Boundary     STD (+/-)     Consensus  
------


Ginzu Domain Prediction 1       Top
Domain Span Source Reference Parent   Parent Span     Confidence     Annotations  
  1-287     alignment     4iwxA_201     1-295   0.8060   LIGASE


PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA       Top
TaxID Species Alignments PSI-Blast Data (alignment with lowest E value)
E value Query Span Sbjct Span Bit Score Identity HSP Length Accession Description
488339synthetic Mycoplasma genitalium JCVI-1.01 (0.03%)5E-631-2871-287247100287ref|NP_072671.1|hypothetical protein MG_011 [Mycoplasma genitalium G37] ref|...
662947Mycoplasma genitalium M22881 (0.03%)1E-621-2871-287246100287ref|YP_006601022.1|hypothetical protein CM5_00055 [Mycoplasma genitalium M2288]...
662945Mycoplasma genitalium M63201 (0.03%)2E-621-2871-28724699287ref|YP_006599530.1|hypothetical protein CM9_00055 [Mycoplasma genitalium M2321]...
1112856Mycoplasma pneumoniae 3091 (0.03%)2E-581-2861-28423260286ref|YP_005175247.1|RimK family protein [Mycoplasma pneumoniae 309] ref|YP_00588...
1238993Mycoplasma pneumoniae M129-B71 (0.03%)8E-581-2861-28423059286ref|NP_109703.1|hypothetical protein MPN015 [Mycoplasma pneumoniae M129] ref...
933115Planococcus donghaensis MPA1U22 (0.05%)3E-5013-2803-25520528268ref|WP_008431457.1|alpha-L-glutamate ligase [Planococcus donghaensis] gb|EGA890...
439292Bacillus selenitireducens MLS104 (0.1%)1E-594-2812-28923623291ref|YP_003699511.1|RimK domain-containing protein ATP-grasp [Bacillus selenitir...
596330Peptoniphilus lacrimalis 315-B1 (0.03%)4E-426-2792-28617821292ref|WP_004826318.1|putative ribosomal protein S6 modification protein [Peptonip...
209882Fusobacterium nucleatum subsp. vincentii ATCC 492561 (0.03%)3E-2190-25389-25710821174ref|WP_005889939.1|D-alanine--D-alanine ligase [Fusobacterium nucleatum] gb|EAA...
546275Fusobacterium periodonticum ATCC 336931 (0.03%)4E-2090-25389-25710521174ref|WP_005971446.1|D-alanine--D-alanine ligase [Fusobacterium periodonticum] gb...
525904Thermobaculum terrenum ATCC BAA-7982 (0.05%)2E-5729-27615-27622920266ref|YP_003322060.1|lysine biosynthesis protein LysX [Thermobaculum terrenum ATC...
178306Pyrobaculum aerophilum str. IM23 (0.08%)3E-5129-2797-26720820264ref|NP_559164.1|ribosomal protein S6 modification protein (rimK) [Pyrobaculu...
656519Halanaerobium hydrogeniformans1 (0.03%)3E-4624-27510-28819220282ref|YP_003994748.1|alpha-L-glutamate ligase [Halanaerobium hydrogeniformans] re...
1053692Methanococcus maripaludis X13 (0.08%)3E-4328-27213-28218220273ref|YP_004741805.1|RimK family alpha-L-glutamate ligase [Methanococcus maripalu...
647171Methanotorris formicicus Mc-S-702 (0.05%)3E-4221-2796-27217820279ref|WP_007043712.1|30S ribosomal protein S6 modification protein [Methanotorris...
439493Candidatus Pelagibacter sp. HTCC72111 (0.03%)6E-245-27428-30611720288ref|WP_008544771.1|glutathione synthase [Candidatus Pelagibacter sp. HTCC7211] ...
851Fusobacterium nucleatum2 (0.05%)1E-2229-25322-25711320241ref|WP_009007080.1|D-alanine--D-alanine ligase [Fusobacterium nucleatum] gb|EFD...
1204474Fusobacterium nucleatum CTI-11 (0.03%)8E-2329-25322-25711320241ref|WP_008702109.1|D-alanine--D-alanine ligase [Fusobacterium nucleatum] gb|EEO...
860Fusobacterium periodonticum1 (0.03%)5E-2090-25389-25710420174ref|WP_008794023.1|D-alanine--D-alanine ligase [Fusobacterium periodonticum] gb...
1283Staphylococcus haemolyticus1 (0.03%)6E-1777-25836-2419420211gb|ACM47313.1|VanA [Staphylococcus haemolyticus]






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