Features and Secondary Structure |
| 1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330 . 340 . 350 . 360 . 370 . 380 . 390 . 400 . 410 . 420 . 430 . 440 . 450 . 460 . 470 . 480 . 490 . 500 . 510 . 520 . 530 . 540 . 550 . 560 . 570 . 580 . 590 . 600 . 610 . 620 . 630 . 640 . 650 . 660 . 670 . 680 . 690 . 700 . 710 . 720 . 730 . 740 . 750 . 760 . 770 . 780 . 790 . 800 . 810 . 820 . 830 . 840 . 850 . 860 . 870 . 880 . 890 . 900 . 910 . 920 . 930 . 940 . 950 |
| MKPEWKNNDFIRVKGARENNLKNINIDIPKNQFVVITGLSGSGKSSLAFNTIYAEGRRRYLESLSSYARQFLGNSDKPDVDLIEGLSPAISIDQKTTSHNPRSTMGTVTEIYDYLRLLWARIGTPYCPNGHGSIQTQTINQIANQIFDLPNKSKVQLLAPTVKNQRGIFTNEFIKYKQLGFLRVLVDGQIYTLDDEIKLDKNTKHNISVVIDRIIINKDNQTYSRIVDSIETIDRLTNGKIEVLKEDGTILNFSKNHGCDKCGFSISELEPRLFSFNSPLGSCSYCKGLGFSYEPDVDKIIADSKLSINQGAIDIFKNIVHGTSLDWQRFLSLVNHYKIPLDKPIEQLDKSQLNLILEGSDEPIEIKTISNSGAKNIRFEHYEGIANLIKRRHLETNSQVSREWYSAYMSEITCKKCHGKKLIKDALSVKLGGIDIISFTELSIDKSIDFLLKLELNDEQKKIGELALKEIINRLSFLKNVGLDYLNLARRASTLSGGEAQRIRLATQIGSQLTGVLYVMDEPSIGLHQKDNMRLIKTMMVMRDLGNTLLVVEHDSETMLAADYLIDIGPKAGNEGGELVACGTPLQVMENSNSITGQYLSGKKQISIPKNRHSGNGKTIIIKGAKVNNLKNINVTIPLNKLVLITGVSGSGKSSLINQTLVPALERILYRKGVKKDTYKEIIGANNIDKIIVVSQDPIGRTPRSNPATYISVFDDIRDLFANTKEAKARGYTNSRFSFNVPGGRCDKCFGDGVIRIEMHFLPDVYVKCEVCNGKKYNSQTLEIKYLGKSIFDVLQMSCKEAYEFFKAIPNISRKLRLLCDVGLEYLQLGINVTFLSGGEAQRIKLSKFLQKKSTGKTLFVLDEPSTGLHLEDINKLLTIIQRIIKNGDTVVVIEHNLDIIKVADYIIDLGPEGGDNGGQIVAQGTPEQLINQVNKSYTAQYLSKILKPDSI |
tmhmm (0) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
low complexity (1%) | -------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXX-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
coiled-coils (0%) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
disordered (2%) | XXXXXXXXXXX------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------X--X-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XX |
psipred | ---------EEEEEE--------EEEE-----EEEEE------HHHHHHHHHHHHHHHHHHH---HHHHHH----------------EEEEEE-----------HHHHHHHHHHHHHHHHH-----------------HHHHHHHHHH-----EEEEE----------HHHHHHHHH----EEEE----EEEE---------------------------HH-----HH--HHHHH---EEEEE----EEEEEE---HH-----------HHHH------EE--------EEE--------------HHH--------------HHHHHHHHHHHH-------HHHH--HHHHHHHH----EEEEEEEE-----EEEEE--HHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHH--HHHH--------HHHHH---HHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHH--HHHH----------HHHHHHHHHHHH------EEEEE--------HHHHHHHHHHHHHHHH---EEEEEE--HHHHHH--EEEE---------EEEEEE--HHHHHH-----HHHHHHHHHH------------EEEEE------------EE-----EEEEEE-------EEHHHHHHHHHHHHH-----------EE--------EEEE------------HHHH---HHHHHHHHHHHHHHH--------------------------EEEE------EEE-------EEE-----EEEEEE---HHHH---HHHHHHHH--HHHHHHHHHHHHH----------------HHHHHHHHHHHHHHH------EEEE--------HHHHHHHHHHHHHHHH---EEEEE---HHHHHH--EEEE---------EEEEEEE-HHHHHH-----HHHHHHHHHH----- |
PSI-BLAST Sequence Hits (Top 20 by Identity) ALL DATA
|
TaxID |
Species |
Alignments |
PSI-Blast Data (alignment with lowest E value) |
E value |
Query Span |
Sbjct Span |
Bit Score |
Identity |
HSP Length |
Accession |
Description |
422288 | Beggiatoa sp. SS | 1 (0.03%) | 2E-64 | 9-145 | 2-138 | 254 | 68 | 137 | gb|EDN71856.1| | excinuclease ABC subunit A [Beggiatoa sp. SS] |
710128 | Mycoplasma gallisepticum str. R(high) | 1 (0.03%) | 0.0 | 2-948 | 3-951 | 1259 | 66 | 949 | ref|NP_852869.2| | excinuclease ABC subunit A UvrA [Mycoplasma gallisepticum st... |
1006581 | Mycoplasma gallisepticum S6 | 1 (0.03%) | 0.0 | 2-948 | 3-951 | 1258 | 66 | 949 | ref|YP_005880378.1| | excinuclease ABC subunit A UvrA [Mycoplasma gallisepticum st... |
408580 | Bacillus coahuilensis | 1 (0.03%) | 1E-77 | 36-202 | 1-167 | 298 | 63 | 167 | ref|WP_010175227.1| | excinuclease ABC subunit A [Bacillus coahuilensis] |
565575 | Ureaplasma urealyticum serovar 10 str. ATCC 33699 | 1 (0.03%) | 0.0 | 9-950 | 2-943 | 1215 | 61 | 944 | ref|YP_002284522.1| | excinuclease ABC subunit A [Ureaplasma urealyticum serovar 1... |
626095 | Ureaplasma urealyticum serovar 8 str. ATCC 27618 | 1 (0.03%) | 0.0 | 9-950 | 2-943 | 1213 | 61 | 944 | ref|WP_004025674.1| | excinuclease ABC subunit A [Ureaplasma urealyticum] gb|EDU06... |
626096 | Ureaplasma urealyticum serovar 2 str. ATCC 27814 | 1 (0.03%) | 0.0 | 9-950 | 2-943 | 1212 | 61 | 944 | ref|WP_004027474.1| | excinuclease ABC subunit A [Ureaplasma urealyticum] gb|EEH02... |
550773 | Ureaplasma urealyticum serovar 9 str. ATCC 33175 | 1 (0.03%) | 0.0 | 9-950 | 2-943 | 1212 | 61 | 944 | ref|WP_004026749.1| | excinuclease ABC subunit A [Ureaplasma urealyticum] gb|EDX53... |
515608 | Ureaplasma parvum serovar 1 str. ATCC 27813 | 1 (0.03%) | 0.0 | 9-950 | 2-943 | 1208 | 61 | 944 | ref|WP_006689316.1| | excinuclease ABC subunit A [Ureaplasma parvum] gb|EDT49207.1... |
550748 | Ureaplasma urealyticum serovar 4 str. ATCC 27816 | 1 (0.03%) | 0.0 | 9-950 | 2-943 | 1211 | 60 | 944 | ref|WP_004026246.1| | excinuclease ABC subunit A [Ureaplasma urealyticum] gb|EDY74... |
422289 | Beggiatoa sp. PS | 1 (0.03%) | 2E-52 | 797-947 | 1-150 | 214 | 60 | 151 | gb|EDN65566.1| | excinuclease ABC subunit A [Beggiatoa sp. PS] |
702450 | Turicibacter sanguinis PC909 | 1 (0.03%) | 0.0 | 8-952 | 2-940 | 1421 | 59 | 945 | ref|WP_006785183.1| | excinuclease ABC subunit A [Turicibacter sanguinis] gb|EFF63... |
910310 | Turicibacter sp. HGF1 | 1 (0.03%) | 0.0 | 8-952 | 2-940 | 1421 | 59 | 945 | ref|WP_009606387.1| | excinuclease ABC subunit A [Turicibacter sp. HGF1] gb|EGC929... |
556270 | Coprobacillus sp. D7 | 1 (0.03%) | 0.0 | 8-947 | 3-940 | 1331 | 59 | 941 | ref|WP_009008478.1| | excinuclease ABC subunit A [Coprobacillus sp. D7] gb|EEO3108... |
469597 | Coprobacillus sp. 8_2_54BFAA | 1 (0.03%) | 0.0 | 8-947 | 3-940 | 1330 | 59 | 941 | ref|WP_003535262.1| | excinuclease ABC subunit A [Erysipelotrichaceae] gb|EDS19652... |
428126 | Clostridium spiroforme DSM 1552 | 1 (0.03%) | 0.0 | 7-947 | 2-940 | 1328 | 59 | 942 | ref|WP_004610755.1| | excinuclease ABC subunit A [[Clostridium] spiroforme] gb|EDS... |
2133 | Spiroplasma citri | 1 (0.03%) | 0.0 | 8-948 | 3-945 | 1254 | 59 | 943 | emb|CAK98502.1| | excinuclease abc subunit a protein [Spiroplasma citri] |
986075 | Caldalkalibacillus thermarum TA2.A1 | 1 (0.03%) | 0.0 | 7-951 | 2-942 | 1451 | 58 | 946 | ref|WP_007504553.1| | excinuclease ABC subunit A [Caldalkalibacillus thermarum] gb... |
1151410 | Clostridium difficile P28 | 1 (0.03%) | 0.0 | 7-949 | 2-939 | 1345 | 58 | 943 | ref|WP_008816571.1| | excinuclease ABC subunit A [Firmicutes] gb|EFR35630.1| excin... |
428127 | Eubacterium dolichum DSM 3991 | 1 (0.03%) | 0.0 | 7-948 | 2-938 | 1336 | 58 | 942 | ref|WP_004800891.1| | excinuclease ABC subunit A [[Eubacterium] dolichum] gb|EDP10... |