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Click the icons below each image to download the prediction in PDB format ( )

Features and Secondary Structure
	1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330 . 340 . 350 . 360 . 370 . 380 . 390 . 400 . 410 . 420 . 430 . 440 . 450 . 460 . 470 . 480 . 490 . 500 . 510 . 520 . 530 . 540 . 550 . 560 . 570 . 580 . 590 . 600
	MKNSYKWDLSVLLNNQSLQANFLKIQTVSEALIKAYNNGLCFTNKTSFEQFLAIDDKFTELENRYTNYLYNKQNENNLDKEVNDAIFAYQSFKNNHNLAFSTLQQELYNHEKLIKDYLTDPKLAVYKRNLMLVFRDKPHQLSSQTQSLLSQINPCFNQAERIFNILSTADLNLQPVVYQNKKYPINSVSDYQSLLENTNRGIRKACYEKWIEIYWTNRNSLSLSLVENYIQLENFAKLKNHPSYIAQTAFNDEIEVGFIDFVYQQVAQFAKTFQAFIRLKKQIYKHVLKVNKVEPYDLTLTLFKTKKSYTIEQAKQDALKVLDLLGDNYIKIVKKAFNENWIDWLADKNKYTGAYSISNVKGLEHFFILMNFDKTKSSLNTLVHELGHSVHSWYASQHQSQNIDPTIFYAEIASIANELLLCYYELQLYKNNHKQLIASLLSQINHFFGATTRQIMFSQFEKDTLYLIRVNQKPDFKTLIKIYANTAVKYQGFKPEVVANKLKKTQYQKSLSHIIAIPHFYAGNFYVYKYAIGQVAGILVAKKINSGDKKMKDNYFKFLSSGSSLAPLETIKLLGIDLTSPQPWQEAHNEVKRWLKIVKQSFKKLQK
tmhmm (0)	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (4%)	-------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXX--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXX----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
coiled-coils (0%)	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
disordered (2%)	X------------------------------XXXXXXXXX--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------X
psipred	---------HHH---HHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHH--HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---EEE----EEEE--HHHHHHHHH---HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH-----HHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--EE-----------------------EEEE-------HHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHH--------------HH------HH-----------EEHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHH------HHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHH--

# SignalP-4.0 gram- predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    21	    0.156
  max. Y    21	    0.187
  max. S     3	    0.350
  mean S     1-20   0.241
       D     1-20   0.213    0.570  NO
Name=tmp_signalp_seq	SP='NO' D=0.213 D-cutoff=0.570 Networks=SignalP-noTM

Domain Repeats Prediction
Boundary	STD (+/-)	Consensus
--	--	--

Ginzu Domain Prediction 1
Domain	Span	Source	Reference Parent	Parent Span	Confidence	Annotations
	1-607	alignment	3ce2A_201	1-595	0.9276	STRUCTURAL GENOMICS, UNKNOWN FUNCTION

PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA
TaxID	Species	Alignments	PSI-Blast Data (alignment with lowest E value)
			E value	Query Span	Sbjct Span	Bit Score	Identity	HSP Length	Accession	Description
662945	Mycoplasma genitalium M6320	1 (0.03%)	1E-136	1-607	1-607	493	100	607	ref|YP_006599715.1|	oligoendopeptidase F [Mycoplasma genitalium M2321] ref|YP_00...
662947	Mycoplasma genitalium M2288	1 (0.03%)	1E-135	1-607	1-607	490	100	607	ref|YP_006601207.1|	oligoendopeptidase F [Mycoplasma genitalium M2288] ref|WP_01...
1112856	Mycoplasma pneumoniae 309	1 (0.03%)	1E-125	1-606	1-607	454	64	607	ref|YP_005175435.1|	oligoendopeptidase F [Mycoplasma pneumoniae 309] ref|YP_0058...
626096	Ureaplasma urealyticum serovar 2 str. ATCC 27814	2 (0.05%)	1E-116	2-607	3-603	425	37	607	ref|YP_002284484.1|	oligoendopeptidase F [Ureaplasma urealyticum serovar 10 str....
550748	Ureaplasma urealyticum serovar 4 str. ATCC 27816	1 (0.03%)	1E-116	2-607	3-603	425	37	607	ref|WP_004026406.1|	oligoendopeptidase F [Ureaplasma urealyticum] gb|EDX53457.1|...
550773	Ureaplasma urealyticum serovar 9 str. ATCC 33175	1 (0.03%)	1E-115	2-607	3-603	424	37	607	ref|WP_004026773.1|	oligoendopeptidase F [Ureaplasma urealyticum] gb|EDX54227.1|...
515611	Ureaplasma urealyticum serovar 13 str. ATCC 33698	1 (0.03%)	1E-102	2-605	6-605	378	36	605	ref|WP_004027113.1|	oligoendopeptidase F [Ureaplasma urealyticum] gb|EDT49588.1|...
515608	Ureaplasma parvum serovar 1 str. ATCC 27813	1 (0.03%)	2E-99	2-605	6-605	370	34	606	ref|WP_006689182.1|	oligoendopeptidase F [Ureaplasma parvum] gb|EDT48779.1| olig...
527031	Bacillus thuringiensis serovar berliner ATCC 10792	3 (0.08%)	3E-74	318-601	1-272	286	33	285	ref|WP_003274646.1|	oligoendopeptidase F [Bacillus thuringiensis] gb|EEM34246.1|...
941640	Mycoplasma haemofelis str. Langford 1	1 (0.03%)	1E-105	1-605	1-600	389	32	608	ref|YP_004191873.1|	oligoendopeptidase F [Mycoplasma haemofelis str. Langford 1]...
391606	Carboxydibrachium pacificum DSM 12653	2 (0.05%)	1E-102	245-600	1-341	379	31	358	ref|WP_009611085.1|	oligoendopeptidase [Caldanaerobacter subterraneus] gb|EEB753...
768728	Lactobacillus salivarius ACS-116-V-Col5a	2 (0.05%)	1E-132	148-604	2-443	480	30	459	ref|WP_003702921.1|	oligoendopeptidase F, partial [Lactobacillus salivarius] gb|...
632292	Caldicellulosiruptor hydrothermalis 108	1 (0.03%)	1E-159	1-607	37-625	569	29	611	ref|YP_003992261.1|	oligoendopeptidase f [Caldicellulosiruptor hydrothermalis 10...
29397	Lactobacillus delbrueckii subsp. lactis	2 (0.05%)	2E-26	470-605	1-126	128	29	136	gb|AAQ06714.1|AF496058_1	oligoendopeptidase f [Lactobacillus delbrueckii subsp. lacti...
476272	Blautia hydrogenotrophica DSM 10507	1 (0.03%)	1E-168	1-602	13-600	598	28	607	ref|WP_005950797.1|	oligopeptidase PepB [Blautia hydrogenotrophica] gb|EEG48120....
1235801	Lactobacillus murinus ASF361	1 (0.03%)	1E-165	1-604	13-602	587	28	609	ref|WP_004048226.1|	oligoendopeptidase F [Lactobacillus murinus] gb|EMZ17912.1| ...
525327	Lactobacillus hilgardii ATCC 8290	1 (0.03%)	1E-164	1-602	22-610	584	28	607	ref|WP_003636590.1|	oligopeptidase PepB [Lactobacillus hilgardii] gb|EEI24081.1|...
525318	Lactobacillus buchneri ATCC 11577	1 (0.03%)	1E-163	1-602	22-610	583	28	607	ref|WP_003561566.1|	oligopeptidase PepB [Lactobacillus buchneri] gb|EEI19829.1| ...
500633	Clostridium hiranonis DSM 13275	2 (0.05%)	1E-159	1-602	20-606	568	28	606	ref|WP_006439648.1|	oligopeptidase PepB [[Clostridium] hiranonis] gb|EEA85630.1|...
656519	Halanaerobium hydrogeniformans	1 (0.03%)	1E-154	1-602	11-598	552	28	607	ref|YP_003995092.1|	oligoendopeptidase F [Halanaerobium hydrogeniformans] ref|WP...