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Job 88701 [SSGCID - TogoA.00877.b] [2019-02-08] [D-172-16-30-137.dhcp4.x.x] [Structure] [Complete]

Features and Secondary Structure  
 
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MLIYVKTVLEEQEPIYPIEGKTVLCWTECHFLDEGSRSSWANGCLECEKPVANPLDTGYTESPLSLHSLAPKRRGALRGASPTARRRLVDRPGLTEDEIEEIREAFNLFDTDGSGMIDPKELKAAMQSLGFETKNPTIYQMIADLDRDSGGPIDFEEFLDAITAKLGDKESREGIQKIFSLFDDDRTGTITLKNLKRVAKELGETMSEDELREMLERADSNGDGEISFEDFYAIMTKKTFP
tmhmm (0)
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
low complexity (0%)
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
coiled-coils (9%)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXX-----------------------------
disordered (27%)
XX-------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------------------------------------------XX----------------------------------------------------------------------XX
psipred
--HHHH----------------HHHHHHH--HHHH---------------------HH-------HHHH-HHHHHHH----HHHHHHHHHH----HHHHHHHHHHHHHHH------EEHHHHHHHHHH------HHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHH-----HHHHHHHHHHH-------EEHHHHHHHHH-----

# SignalP-4.0 gram- predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    42	    0.243
  max. Y    42	    0.161
  max. S    10	    0.175
  mean S     1-41   0.110
       D     1-41   0.137    0.570  NO
Name=tmp_signalp_seq	SP='NO' D=0.137 D-cutoff=0.570 Networks=SignalP-noTM


Domain Repeats Prediction     Top
  Boundary     STD (+/-)     Consensus  
------


Ginzu Domain Prediction 1     Top
Domain Span Source Reference Parent   Parent Span     Confidence     Annotations  
  1-80     alignment     6a3fB_301     1-383   0.079700   --
  81-241     alignment     3wldA_303     1-393   0.621100   --

Ginzu Domain Prediction 2     Top
Domain Span Source Reference Parent   Parent Span     Confidence     Annotations  
  1-80     msa     6a3fB_301     1-383   0.079700   --
  81-241     alignment     3wldA_303     1-393   0.621100   --


PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA       Top
TaxID Species Alignments PSI-Blast Data (alignment with lowest E value)
E value Query Span Sbjct Span Bit Score Identity HSP Length Accession Description
508771Toxoplasma gondii ME492 (0.05%)8E-681-2411-241262100241ref|XP_002367347.1|caltractin, putative [Toxoplasma gondii ME49]
572307Neospora caninum Liverpool3 (0.08%)3E-4372-2411-17018197170ref|XP_003886219.1|putative caltractin [Neospora caninum Liverpool] emb|CBZ5619...
38836Pterosperma cristatum1 (0.03%)5E-31102-2341-13314064133emb|CAA58719.1|centrin [Pterosperma cristatum]
35845Acetabularia acetabulum3 (0.08%)3E-24105-2191-11511864115gb|AAM00015.1|AF493612_1centrin [Acetabularia acetabulum]
38833Micromonas pusilla1 (0.03%)9E-3894-2401-14716361147emb|CAA58718.1|centrin [Micromonas pusilla]
1156394Saprolegnia diclina VS201 (0.03%)1E-3992-24025-17316959149gb|EQC28236.1|caltractin [Saprolegnia diclina VS20]
3190Scherffelia dubia1 (0.03%)9E-4078-2405-16717058163sp|Q06827.1|CATR_SCHDURecName: Full=Caltractin; AltName: Full=Centrin emb|CAA49153...
13146Melopsittacus undulatus1 (0.03%)2E-4179-2409-17017556162ref|NP_001264849.1|centrin-1 [Gallus gallus] ref|XP_005143061.1| PREDICTED: cen...
2986Ochromonas danica1 (0.03%)1E-3880-2402-16216556161dbj|BAD20709.1|centrin [Ochromonas danica] dbj|BAD20712.1| centrin [Ochromo...
8496Alligator mississippiensis1 (0.03%)2E-4279-24030-19117855162ref|XP_006263501.1|PREDICTED: centrin-1-like [Alligator mississippiensis]
8355Xenopus laevis46 (1.15%)1E-4079-2409-17017355162ref|NP_001090133.1|centrin 4 [Xenopus laevis] gb|AAI08523.1| MGC130946 protein ...
8354Xenopus borealis1 (0.03%)1E-3398-2401-14214955143gb|ACC55009.1|centrin, EF-hand protein 2 [Xenopus borealis]
112090Aphanomyces astaci1 (0.03%)3E-4174-2408-17417554167gb|ETV71479.1|caltractin, partial [Aphanomyces astaci]
67593Phytophthora sojae2 (0.05%)3E-4175-2406-17117454166gb|EGZ11570.1|Ca2+-binding protein/EF-hand superfamily protein [Phytophtho...
312017Tetrahymena thermophila SB2109 (0.23%)2E-4075-2401-16617254166ref|XP_001019292.1|EF hand family protein [Tetrahymena thermophila] gb|AAF66602...
59764Marsilea vestita1 (0.03%)4E-4069-2401-16917154172gb|AAC04626.1|centrin [Marsilea vestita]
27967Scytosiphon lomentaria1 (0.03%)2E-3979-2402-16316854162dbj|BAD20710.1|centrin [Scytosiphon lomentaria] dbj|BAD20711.1| centrin [Sc...
407301Karlodinium veneficum3 (0.08%)4E-3890-24012-16216454151gb|ABV22245.1|caltractin [Karlodinium veneficum]
2961Amphidinium carterae1 (0.03%)6E-3890-24012-16216354151gb|ADV03067.1|centrin [Amphidinium carterae]
41875Bathycoccus prasinos1 (0.03%)2E-3781-2404-16316254160emb|CCO15531.1|centrin [Bathycoccus prasinos]






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